BLASTX nr result

ID: Bupleurum21_contig00021266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021266
         (813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318790.1| hypothetical protein POPTRDRAFT_806590 [Popu...   252   2e-70
ref|XP_002273150.1| PREDICTED: staphylococcal nuclease domain-co...   250   1e-69
emb|CAN83456.1| hypothetical protein VITISV_034601 [Vitis vinifera]   250   1e-69
ref|XP_002278217.1| PREDICTED: staphylococcal nuclease domain-co...   246   3e-68
ref|XP_002322312.1| predicted protein [Populus trichocarpa] gi|2...   243   4e-68

>ref|XP_002318790.1| hypothetical protein POPTRDRAFT_806590 [Populus trichocarpa]
           gi|222859463|gb|EEE97010.1| hypothetical protein
           POPTRDRAFT_806590 [Populus trichocarpa]
          Length = 978

 Score =  252 bits (643), Expect(2) = 2e-70
 Identities = 133/246 (54%), Positives = 173/246 (70%), Gaps = 3/246 (1%)
 Frame = -2

Query: 812 DPFAWQSREFLRSLCLGKEVVFQVDYSAR--GREFGTVCVGDKHIAFLVVAQGWAKVWDV 639
           +PFAW SRE+LR+LC+GKEV F+VDY+    GREFG+V +GDK++A LVVA+GWAKV + 
Sbjct: 61  EPFAWLSREYLRNLCIGKEVTFKVDYAVPSIGREFGSVFLGDKNVALLVVAEGWAKVRE- 119

Query: 638 RGKEKGNGEFSPHLKKLLRLQEQAKEQGVGHWSEVPGASQYAVRKLPPSAVSNPASLDVM 459
           +G++KG  E SP L  LLRL+EQAK++G+G WS+ PGAS+ ++R LPPSA+ +P++LD M
Sbjct: 120 QGQQKG--EASPFLADLLRLEEQAKQEGLGRWSKAPGASEASIRNLPPSAIGDPSNLDAM 177

Query: 458 ALLNELKGSPTMAFVENVRDGSTVRVYFLPDYLFVQVFVAGIQAPSMGKRIVEPEKASSE 279
            LL + KG P    VE VRDGSTVRVY LPD+ FVQVFVAGIQAPSMG+R      A +E
Sbjct: 178 DLLAKNKGRPMQGIVEQVRDGSTVRVYLLPDFQFVQVFVAGIQAPSMGRRAAVETVAETE 237

Query: 278 AKGITSNG-GHGTLLXXXXXXXXXXXXSVTRSDPDPYGRESKHFTEISVLHRYVNIVLEG 102
                +NG   G L             +     PDP+G E+K+FTE+  L+R V IVLEG
Sbjct: 238 TISNETNGDASGALAPLTSAQRLAASTTPPEVAPDPFGMEAKYFTELRTLNRDVRIVLEG 297

Query: 101 VDNYNN 84
           VD ++N
Sbjct: 298 VDKFSN 303



 Score = 40.8 bits (94), Expect(2) = 2e-70
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = -3

Query: 82  NLV*LVYYPDGEQSKNLGVQLVENGLA 2
           NL+  VYYPDGE  K+L ++LVENGLA
Sbjct: 303 NLIGSVYYPDGESPKDLALELVENGLA 329


>ref|XP_002273150.1| PREDICTED: staphylococcal nuclease domain-containing protein 1
           [Vitis vinifera] gi|296088151|emb|CBI35621.3| unnamed
           protein product [Vitis vinifera]
          Length = 1000

 Score =  250 bits (639), Expect(2) = 1e-69
 Identities = 135/250 (54%), Positives = 172/250 (68%), Gaps = 7/250 (2%)
 Frame = -2

Query: 812 DPFAWQSREFLRSLCLGKEVVFQVDYSAR--GREFGTVCVGDKHIAFLVVAQGWAKVWDV 639
           +PFAW SRE+LR LC+GKEV F+VDY+    GREFG+V +GDK+++ LVV++GWA+V + 
Sbjct: 64  EPFAWDSREYLRKLCIGKEVTFRVDYTVPSIGREFGSVFLGDKNVSVLVVSEGWARVRET 123

Query: 638 RGKEKGNGEFSPHLKKLLRLQEQAKEQGVGHWSEVPGASQYAVRKLPPSAVSNPASLDVM 459
            G++KG  E SP L +LLRL+EQAK+Q +G WS+ PGAS+ ++R LPPSA+ +P++LD M
Sbjct: 124 -GQQKG--EVSPVLAELLRLEEQAKQQCLGRWSKTPGASELSIRNLPPSAIGDPSNLDAM 180

Query: 458 ALLNELKGSPTMAFVENVRDGSTVRVYFLPDYLFVQVFVAGIQAPSMGKR-----IVEPE 294
            LLN  KG      VE VRDGST+RVY LP++ FVQVFVAGIQAPSMG+R     IVE E
Sbjct: 181 GLLNANKGRAMQGIVEQVRDGSTIRVYLLPEFQFVQVFVAGIQAPSMGRRAAAEAIVETE 240

Query: 293 KASSEAKGITSNGGHGTLLXXXXXXXXXXXXSVTRSDPDPYGRESKHFTEISVLHRYVNI 114
            AS E  G  S      L                   P+P+G+E+KHFTEI VLHR V I
Sbjct: 241 LASDEPNGEGSAETRPALTSAQRLAASTASS--NEVAPEPFGKEAKHFTEIRVLHREVRI 298

Query: 113 VLEGVDNYNN 84
           VLEGVD + N
Sbjct: 299 VLEGVDKFGN 308



 Score = 39.7 bits (91), Expect(2) = 1e-69
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = -3

Query: 82  NLV*LVYYPDGEQSKNLGVQLVENGLA 2
           NL+  VYYPDGE +K+L ++LVE+GLA
Sbjct: 308 NLIGSVYYPDGESAKDLALELVESGLA 334


>emb|CAN83456.1| hypothetical protein VITISV_034601 [Vitis vinifera]
          Length = 983

 Score =  250 bits (639), Expect(2) = 1e-69
 Identities = 135/250 (54%), Positives = 172/250 (68%), Gaps = 7/250 (2%)
 Frame = -2

Query: 812 DPFAWQSREFLRSLCLGKEVVFQVDYSAR--GREFGTVCVGDKHIAFLVVAQGWAKVWDV 639
           +PFAW SRE+LR LC+GKEV F+VDY+    GREFG+V +GDK+++ LVV++GWA+V + 
Sbjct: 57  EPFAWDSREYLRKLCIGKEVTFRVDYTVPSIGREFGSVFLGDKNVSVLVVSEGWARVRET 116

Query: 638 RGKEKGNGEFSPHLKKLLRLQEQAKEQGVGHWSEVPGASQYAVRKLPPSAVSNPASLDVM 459
            G++KG  E SP L +LLRL+EQAK+Q +G WS+ PGAS+ ++R LPPSA+ +P++LD M
Sbjct: 117 -GQQKG--EVSPVLAELLRLEEQAKQQCLGRWSKTPGASELSIRNLPPSAIGDPSNLDAM 173

Query: 458 ALLNELKGSPTMAFVENVRDGSTVRVYFLPDYLFVQVFVAGIQAPSMGKR-----IVEPE 294
            LLN  KG      VE VRDGST+RVY LP++ FVQVFVAGIQAPSMG+R     IVE E
Sbjct: 174 GLLNANKGRAMQGIVEQVRDGSTIRVYLLPEFQFVQVFVAGIQAPSMGRRAAAEAIVETE 233

Query: 293 KASSEAKGITSNGGHGTLLXXXXXXXXXXXXSVTRSDPDPYGRESKHFTEISVLHRYVNI 114
            AS E  G  S      L                   P+P+G+E+KHFTEI VLHR V I
Sbjct: 234 LASDEPNGEGSAETRPALTSAQRLAASTASS--NEVAPEPFGKEAKHFTEIRVLHREVRI 291

Query: 113 VLEGVDNYNN 84
           VLEGVD + N
Sbjct: 292 VLEGVDKFGN 301



 Score = 39.7 bits (91), Expect(2) = 1e-69
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = -3

Query: 82  NLV*LVYYPDGEQSKNLGVQLVENGLA 2
           NL+  VYYPDGE +K+L ++LVE+GLA
Sbjct: 301 NLIGSVYYPDGESAKDLALELVESGLA 327


>ref|XP_002278217.1| PREDICTED: staphylococcal nuclease domain-containing protein 1
           [Vitis vinifera] gi|296082235|emb|CBI21240.3| unnamed
           protein product [Vitis vinifera]
          Length = 991

 Score =  246 bits (628), Expect(2) = 3e-68
 Identities = 134/250 (53%), Positives = 174/250 (69%), Gaps = 7/250 (2%)
 Frame = -2

Query: 812 DPFAWQSREFLRSLCLGKEVVFQVDY--SARGREFGTVCVGDKHIAFLVVAQGWAKVWDV 639
           +PFAW SRE+LR LC+GKEV F+ DY  S+ GREF +V + DK++  +VVA+GWAKV + 
Sbjct: 60  EPFAWDSREYLRKLCIGKEVSFRADYTVSSIGREFCSVFLQDKNVTSMVVAEGWAKVRE- 118

Query: 638 RGKEKGNGEFSPHLKKLLRLQEQAKEQGVGHWSEVPGASQYAVRKLPPSAVSNPASLDVM 459
           +G++KG  E SP L + LRL+EQAK+QG+G WS++PGAS+ ++RKLPPSAV +P++LD M
Sbjct: 119 QGQQKG--EASPFLAEFLRLEEQAKQQGLGRWSKLPGASEASIRKLPPSAVGDPSNLDAM 176

Query: 458 ALLNELKGSPTMAFVENVRDGSTVRVYFLPDYLFVQVFVAGIQAPSMGKR-----IVEPE 294
            LL+  KG P    VE VRDGSTVRVY LP++ FVQVFVAGIQ+ SMG+R     ++EPE
Sbjct: 177 GLLSANKGRPMQGIVEQVRDGSTVRVYLLPEFQFVQVFVAGIQSSSMGRRGVADSVLEPE 236

Query: 293 KASSEAKGITSNGGHGTLLXXXXXXXXXXXXSVTRSDPDPYGRESKHFTEISVLHRYVNI 114
            +S E  G  S      L               T   PDP+G+E+KHFTE  VL+R V I
Sbjct: 237 TSSDEPNGEVSAKIRVPLTSAQRVAASSASS--TEIAPDPFGKEAKHFTETRVLNRDVRI 294

Query: 113 VLEGVDNYNN 84
           VLEGVD Y+N
Sbjct: 295 VLEGVDKYSN 304



 Score = 39.3 bits (90), Expect(2) = 3e-68
 Identities = 16/27 (59%), Positives = 23/27 (85%)
 Frame = -3

Query: 82  NLV*LVYYPDGEQSKNLGVQLVENGLA 2
           NL+  VYYPDG+ +K+L ++LV+NGLA
Sbjct: 304 NLIGSVYYPDGDSAKDLALELVQNGLA 330


>ref|XP_002322312.1| predicted protein [Populus trichocarpa] gi|222869308|gb|EEF06439.1|
           predicted protein [Populus trichocarpa]
          Length = 984

 Score =  243 bits (621), Expect(2) = 4e-68
 Identities = 132/252 (52%), Positives = 175/252 (69%), Gaps = 9/252 (3%)
 Frame = -2

Query: 812 DPFAWQSREFLRSLCLGKEVVFQVDYSAR--GREFGTVCVGDKHIAFLVVAQGWAKVWDV 639
           +PFAW SRE+LR LC+GKEV F+VDY+    GREFG+V +G+K++A LVV++GWAKV + 
Sbjct: 61  EPFAWNSREYLRKLCIGKEVTFKVDYAVPSIGREFGSVFLGEKNVALLVVSEGWAKVRE- 119

Query: 638 RGKEKGNGEFSPHLKKLLRLQEQAKEQGVGHWSEVPGASQYAVRKLPPSAVSNPASLDVM 459
           +G++KG  E SP L +LLRL+EQAK+QG+G WS+ PGAS+ ++R LPPSA+ + ++ D M
Sbjct: 120 QGQQKG--EASPFLAELLRLEEQAKQQGLGRWSKAPGASEASIRNLPPSAIGDSSNFDAM 177

Query: 458 ALLNELKGSPTMAFVENVRDGSTVRVYFLPDYLFVQVFVAGIQAPSMGKRIVEPEKASSE 279
            LL   KG+P    VE VRDGST+RVY LPD+ FVQVFVAGIQAPSMGKR      A+ E
Sbjct: 178 GLLAANKGTPMECIVEQVRDGSTIRVYLLPDFQFVQVFVAGIQAPSMGKR------AAIE 231

Query: 278 AKG---ITSNGGHGTLLXXXXXXXXXXXXSVTRSD----PDPYGRESKHFTEISVLHRYV 120
             G    TSNG +G               + + +     PDP+G E+K+FTE+  L+R V
Sbjct: 232 TVGETVTTSNGTNGDTSETRAPLTSAQRLAASAAPPEVAPDPFGMEAKYFTELRTLNRDV 291

Query: 119 NIVLEGVDNYNN 84
            IVLEGVD ++N
Sbjct: 292 RIVLEGVDKFSN 303



 Score = 41.6 bits (96), Expect(2) = 4e-68
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = -3

Query: 82  NLV*LVYYPDGEQSKNLGVQLVENGLA 2
           NL+  VYYPDGE +K+L ++LVENGLA
Sbjct: 303 NLIGSVYYPDGESAKDLALELVENGLA 329


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