BLASTX nr result

ID: Bupleurum21_contig00021258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021258
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524049.1| PREDICTED: MND1-interacting protein 1-like [...    81   8e-14
ref|XP_002281049.1| PREDICTED: MND1-interacting protein 1 [Vitis...    80   2e-13
emb|CAN78110.1| hypothetical protein VITISV_004428 [Vitis vinifera]    80   2e-13
ref|XP_003549979.1| PREDICTED: MND1-interacting protein 1-like [...    78   6e-13
ref|NP_001189683.1| RING-finger domain-containing protein [Arabi...    76   3e-12

>ref|XP_003524049.1| PREDICTED: MND1-interacting protein 1-like [Glycine max]
          Length = 733

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 43/86 (50%), Positives = 53/86 (61%)
 Frame = -1

Query: 271 GMVYLLRQLKPRLSKGDAMWCILMSNLHLGRASMMAIPVLHPPTSDNQCATTLPPPSNVG 92
           GMV LL+Q++P LSKGDAMWC+LMS+LH+GRAS M IPV  P       AT     ++ G
Sbjct: 186 GMVCLLQQVRPHLSKGDAMWCLLMSDLHVGRASAMEIPV--PDNGSTVPATGEGGANSAG 243

Query: 91  GNHPALCRFHXXXXXXXXXTAEYPMN 14
              PALCRFH           E+P+N
Sbjct: 244 VMAPALCRFHGGWGFGNGGGLEFPVN 269


>ref|XP_002281049.1| PREDICTED: MND1-interacting protein 1 [Vitis vinifera]
          Length = 723

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 9/95 (9%)
 Frame = -1

Query: 271 GMVYLLRQLKPRLSKGDAMWCILMSNLHLGRASMMAIPVLHPPTSDNQC---------AT 119
           GM+ LL+Q++P L+KGDAMWC+LM +LH+GRAS + IPVL  P ++N C           
Sbjct: 168 GMICLLQQVRPHLTKGDAMWCLLMCDLHVGRASTIEIPVLPSPINNNGCGGPVNSNANVE 227

Query: 118 TLPPPSNVGGNHPALCRFHXXXXXXXXXTAEYPMN 14
           ++   S+VG   P LC+FH          +E+P N
Sbjct: 228 SVNSSSSVGVAVPPLCKFHGGWGFGNGPVSEFPAN 262


>emb|CAN78110.1| hypothetical protein VITISV_004428 [Vitis vinifera]
          Length = 1207

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 9/95 (9%)
 Frame = -1

Query: 271 GMVYLLRQLKPRLSKGDAMWCILMSNLHLGRASMMAIPVLHPPTSDNQC---------AT 119
           GM+ LL+Q++P L+KGDAMWC+LM +LH+GRAS + IPVL  P ++N C           
Sbjct: 168 GMICLLQQVRPHLTKGDAMWCLLMCDLHVGRASTIEIPVLPSPINNNGCGGPVNSNANVE 227

Query: 118 TLPPPSNVGGNHPALCRFHXXXXXXXXXTAEYPMN 14
           ++   S+VG   P LC+FH          +E+P N
Sbjct: 228 SVNGSSSVGVAVPPLCKFHGGWGFGNGPVSEFPAN 262


>ref|XP_003549979.1| PREDICTED: MND1-interacting protein 1-like [Glycine max]
          Length = 721

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
 Frame = -1

Query: 271 GMVYLLRQLKPRLSKGDAMWCILMSNLHLGRASMMAIPVLHPPTSDNQCATTLPPPSNVG 92
           GM+ LL+Q++P LSKGDAMWC+LMS+LH+GRAS M IP       +    +T+P    VG
Sbjct: 174 GMLCLLQQVRPHLSKGDAMWCLLMSDLHVGRASAMEIP-------EPGNGSTVPAAGEVG 226

Query: 91  GN-----HPALCRFHXXXXXXXXXTAEYPMN 14
            N      PALCRFH           E+P+N
Sbjct: 227 ANLVGAMAPALCRFHGGWGFGSGGGLEFPVN 257


>ref|NP_001189683.1| RING-finger domain-containing protein [Arabidopsis thaliana]
           gi|330254001|gb|AEC09095.1| RING-finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 711

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 43/72 (59%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = -1

Query: 271 GMVYLLRQLKPRLSKGDAMWCILMSNLHLGRASMMAIPVLHPPTSDNQCATTLPPPSN-V 95
           GMVYLL+Q+KP LSKGDAMWC+LMS LH+GRAS M IP      S N          N V
Sbjct: 169 GMVYLLQQVKPNLSKGDAMWCLLMSELHVGRASTMDIPSSGKGDSSNVGVGGASSTVNGV 228

Query: 94  GGN-HPALCRFH 62
           GG   PALCRFH
Sbjct: 229 GGAIAPALCRFH 240


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