BLASTX nr result
ID: Bupleurum21_contig00021258
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00021258 (274 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003524049.1| PREDICTED: MND1-interacting protein 1-like [... 81 8e-14 ref|XP_002281049.1| PREDICTED: MND1-interacting protein 1 [Vitis... 80 2e-13 emb|CAN78110.1| hypothetical protein VITISV_004428 [Vitis vinifera] 80 2e-13 ref|XP_003549979.1| PREDICTED: MND1-interacting protein 1-like [... 78 6e-13 ref|NP_001189683.1| RING-finger domain-containing protein [Arabi... 76 3e-12 >ref|XP_003524049.1| PREDICTED: MND1-interacting protein 1-like [Glycine max] Length = 733 Score = 81.3 bits (199), Expect = 8e-14 Identities = 43/86 (50%), Positives = 53/86 (61%) Frame = -1 Query: 271 GMVYLLRQLKPRLSKGDAMWCILMSNLHLGRASMMAIPVLHPPTSDNQCATTLPPPSNVG 92 GMV LL+Q++P LSKGDAMWC+LMS+LH+GRAS M IPV P AT ++ G Sbjct: 186 GMVCLLQQVRPHLSKGDAMWCLLMSDLHVGRASAMEIPV--PDNGSTVPATGEGGANSAG 243 Query: 91 GNHPALCRFHXXXXXXXXXTAEYPMN 14 PALCRFH E+P+N Sbjct: 244 VMAPALCRFHGGWGFGNGGGLEFPVN 269 >ref|XP_002281049.1| PREDICTED: MND1-interacting protein 1 [Vitis vinifera] Length = 723 Score = 80.1 bits (196), Expect = 2e-13 Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 9/95 (9%) Frame = -1 Query: 271 GMVYLLRQLKPRLSKGDAMWCILMSNLHLGRASMMAIPVLHPPTSDNQC---------AT 119 GM+ LL+Q++P L+KGDAMWC+LM +LH+GRAS + IPVL P ++N C Sbjct: 168 GMICLLQQVRPHLTKGDAMWCLLMCDLHVGRASTIEIPVLPSPINNNGCGGPVNSNANVE 227 Query: 118 TLPPPSNVGGNHPALCRFHXXXXXXXXXTAEYPMN 14 ++ S+VG P LC+FH +E+P N Sbjct: 228 SVNSSSSVGVAVPPLCKFHGGWGFGNGPVSEFPAN 262 >emb|CAN78110.1| hypothetical protein VITISV_004428 [Vitis vinifera] Length = 1207 Score = 79.7 bits (195), Expect = 2e-13 Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 9/95 (9%) Frame = -1 Query: 271 GMVYLLRQLKPRLSKGDAMWCILMSNLHLGRASMMAIPVLHPPTSDNQC---------AT 119 GM+ LL+Q++P L+KGDAMWC+LM +LH+GRAS + IPVL P ++N C Sbjct: 168 GMICLLQQVRPHLTKGDAMWCLLMCDLHVGRASTIEIPVLPSPINNNGCGGPVNSNANVE 227 Query: 118 TLPPPSNVGGNHPALCRFHXXXXXXXXXTAEYPMN 14 ++ S+VG P LC+FH +E+P N Sbjct: 228 SVNGSSSVGVAVPPLCKFHGGWGFGNGPVSEFPAN 262 >ref|XP_003549979.1| PREDICTED: MND1-interacting protein 1-like [Glycine max] Length = 721 Score = 78.2 bits (191), Expect = 6e-13 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 5/91 (5%) Frame = -1 Query: 271 GMVYLLRQLKPRLSKGDAMWCILMSNLHLGRASMMAIPVLHPPTSDNQCATTLPPPSNVG 92 GM+ LL+Q++P LSKGDAMWC+LMS+LH+GRAS M IP + +T+P VG Sbjct: 174 GMLCLLQQVRPHLSKGDAMWCLLMSDLHVGRASAMEIP-------EPGNGSTVPAAGEVG 226 Query: 91 GN-----HPALCRFHXXXXXXXXXTAEYPMN 14 N PALCRFH E+P+N Sbjct: 227 ANLVGAMAPALCRFHGGWGFGSGGGLEFPVN 257 >ref|NP_001189683.1| RING-finger domain-containing protein [Arabidopsis thaliana] gi|330254001|gb|AEC09095.1| RING-finger domain-containing protein [Arabidopsis thaliana] Length = 711 Score = 75.9 bits (185), Expect = 3e-12 Identities = 43/72 (59%), Positives = 47/72 (65%), Gaps = 2/72 (2%) Frame = -1 Query: 271 GMVYLLRQLKPRLSKGDAMWCILMSNLHLGRASMMAIPVLHPPTSDNQCATTLPPPSN-V 95 GMVYLL+Q+KP LSKGDAMWC+LMS LH+GRAS M IP S N N V Sbjct: 169 GMVYLLQQVKPNLSKGDAMWCLLMSELHVGRASTMDIPSSGKGDSSNVGVGGASSTVNGV 228 Query: 94 GGN-HPALCRFH 62 GG PALCRFH Sbjct: 229 GGAIAPALCRFH 240