BLASTX nr result

ID: Bupleurum21_contig00021256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021256
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281049.1| PREDICTED: MND1-interacting protein 1 [Vitis...    60   2e-07
emb|CAN78110.1| hypothetical protein VITISV_004428 [Vitis vinifera]    60   2e-07
ref|XP_003524049.1| PREDICTED: MND1-interacting protein 1-like [...    59   5e-07
ref|XP_003549979.1| PREDICTED: MND1-interacting protein 1-like [...    58   9e-07
ref|XP_002326714.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002281049.1| PREDICTED: MND1-interacting protein 1 [Vitis vinifera]
          Length = 723

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/96 (37%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
 Frame = -2

Query: 254 KGDAMWCILMSNLHLGRASMMEIPVLHPPAKENQCA----TTLXXXXXXXXXXXXXXXPA 87
           KGDAMWC+LM +LH+GRAS +EIPVL  P   N C     +                 P 
Sbjct: 182 KGDAMWCLLMCDLHVGRASTIEIPVLPSPINNNGCGGPVNSNANVESVNSSSSVGVAVPP 241

Query: 86  LCRFHXXXXXXXXXTAEYPMN--------LTLQREI 3
           LC+FH          +E+P N        +TLQR+I
Sbjct: 242 LCKFHGGWGFGNGPVSEFPANGLFQCSTDVTLQRDI 277


>emb|CAN78110.1| hypothetical protein VITISV_004428 [Vitis vinifera]
          Length = 1207

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/96 (37%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
 Frame = -2

Query: 254 KGDAMWCILMSNLHLGRASMMEIPVLHPPAKENQCA----TTLXXXXXXXXXXXXXXXPA 87
           KGDAMWC+LM +LH+GRAS +EIPVL  P   N C     +                 P 
Sbjct: 182 KGDAMWCLLMCDLHVGRASTIEIPVLPSPINNNGCGGPVNSNANVESVNGSSSVGVAVPP 241

Query: 86  LCRFHXXXXXXXXXTAEYPMN--------LTLQREI 3
           LC+FH          +E+P N        +TLQR+I
Sbjct: 242 LCKFHGGWGFGNGPVSEFPANGLFQCSTDVTLQRDI 277


>ref|XP_003524049.1| PREDICTED: MND1-interacting protein 1-like [Glycine max]
          Length = 733

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/94 (41%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
 Frame = -2

Query: 254 KGDAMWCILMSNLHLGRASMMEIPVLHPPAKENQCATTLXXXXXXXXXXXXXXXPALCRF 75
           KGDAMWC+LMS+LH+GRAS MEIPV      +N   +T+               PALCRF
Sbjct: 200 KGDAMWCLLMSDLHVGRASAMEIPV-----PDN--GSTVPATGEGGANSAGVMAPALCRF 252

Query: 74  HXXXXXXXXXTAEYP----------MNLTLQREI 3
           H           E+P          MNL LQR+I
Sbjct: 253 HGGWGFGNGGGLEFPVNGIFSCGAEMNLQLQRDI 286


>ref|XP_003549979.1| PREDICTED: MND1-interacting protein 1-like [Glycine max]
          Length = 721

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 38/94 (40%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
 Frame = -2

Query: 254 KGDAMWCILMSNLHLGRASMMEIPVLHPPAKENQCATTLXXXXXXXXXXXXXXXPALCRF 75
           KGDAMWC+LMS+LH+GRAS MEIP       E    +T+               PALCRF
Sbjct: 188 KGDAMWCLLMSDLHVGRASAMEIP-------EPGNGSTVPAAGEVGANLVGAMAPALCRF 240

Query: 74  HXXXXXXXXXTAEYP----------MNLTLQREI 3
           H           E+P          MNL LQR+I
Sbjct: 241 HGGWGFGSGGGLEFPVNGIFSCGAEMNLQLQRDI 274


>ref|XP_002326714.1| predicted protein [Populus trichocarpa] gi|222834036|gb|EEE72513.1|
           predicted protein [Populus trichocarpa]
          Length = 718

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/92 (36%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
 Frame = -2

Query: 254 KGDAMWCILMSNLHLGRASMMEIPVLHPPAKENQCATTLXXXXXXXXXXXXXXXPALCRF 75
           KGDAMWC+LMS+LH+GRAS +EIPV   P   +                     PALCRF
Sbjct: 180 KGDAMWCLLMSDLHVGRASALEIPVTSFPGNGSGNVQGSVESVSGVDNGVGVVAPALCRF 239

Query: 74  HXXXXXXXXXTAE--------YPMNLTLQREI 3
           H          +E        Y   +TLQ++I
Sbjct: 240 HGGWGFGSGGGSEFSPDGFFSYSAEMTLQKDI 271


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