BLASTX nr result

ID: Bupleurum21_contig00021255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021255
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281049.1| PREDICTED: MND1-interacting protein 1 [Vitis...   245   7e-63
emb|CAN78110.1| hypothetical protein VITISV_004428 [Vitis vinifera]   245   1e-62
ref|XP_003549979.1| PREDICTED: MND1-interacting protein 1-like [...   234   1e-59
ref|XP_003524049.1| PREDICTED: MND1-interacting protein 1-like [...   233   5e-59
ref|XP_002519838.1| synaptonemal complex protein, putative [Rici...   223   4e-56

>ref|XP_002281049.1| PREDICTED: MND1-interacting protein 1 [Vitis vinifera]
          Length = 723

 Score =  245 bits (626), Expect = 7e-63
 Identities = 127/217 (58%), Positives = 158/217 (72%), Gaps = 14/217 (6%)
 Frame = +2

Query: 176 MGLTMREKHIRPNRRQRSSKPDNDHSG-------KSGINESGTKLFNHQVGV-----NQN 319
           MG T+REKHIR  RR RS K DNDH+           I ++G K   H VGV     N +
Sbjct: 1   MGCTVREKHIRTTRRPRSVKTDNDHASAFDRASISKSIFDAGLKPLGHHVGVHDSGQNPH 60

Query: 320 PNSHSCDSGWGYCTEEQLEEILLKNMELLYSEAVSKLISLGYDEDVAVKAILRNGNYYNG 499
           PN +  DSGWGYCTEEQLEEILLKN+E LY+EA+SKL++LGYD+DVA+KAILRNG+ Y G
Sbjct: 61  PNPNFDDSGWGYCTEEQLEEILLKNLEFLYNEAISKLVALGYDDDVALKAILRNGHCY-G 119

Query: 500 GMDVLTNVLHNSLTYL--XXXXXXXXXXXDVVKPVFANLKQLEEFSVMGMVYLLQQLKPH 673
           GMDVLTN+LHNSL YL             D  +PVF++L+QLEE+S+ GM+ LLQQ++PH
Sbjct: 120 GMDVLTNILHNSLAYLNSNCGGGSSNVNSDEAEPVFSDLRQLEEYSLAGMICLLQQVRPH 179

Query: 674 LSKGDAMWCILMSNLHLGRASMMAIPVLHSPASDNQC 784
           L+KGDAMWC+LM +LH+GRAS + IPVL SP ++N C
Sbjct: 180 LTKGDAMWCLLMCDLHVGRASTIEIPVLPSPINNNGC 216


>emb|CAN78110.1| hypothetical protein VITISV_004428 [Vitis vinifera]
          Length = 1207

 Score =  245 bits (625), Expect = 1e-62
 Identities = 127/217 (58%), Positives = 158/217 (72%), Gaps = 14/217 (6%)
 Frame = +2

Query: 176 MGLTMREKHIRPNRRQRSSKPDNDHSG-------KSGINESGTKLFNHQVGV-----NQN 319
           MG T+REKHIR  RR RS K DNDH+           I ++G K   + VGV     N N
Sbjct: 1   MGCTVREKHIRTTRRPRSVKTDNDHASAFDRASISKSIFDAGLKPLGYHVGVHDSGQNPN 60

Query: 320 PNSHSCDSGWGYCTEEQLEEILLKNMELLYSEAVSKLISLGYDEDVAVKAILRNGNYYNG 499
           PN +  DSGWGYCTEEQLEEILLKN+E LY+EA+SKL++LGYD+DVA+KAILRNG+ Y G
Sbjct: 61  PNPNFDDSGWGYCTEEQLEEILLKNLEFLYNEAISKLVALGYDDDVALKAILRNGHCY-G 119

Query: 500 GMDVLTNVLHNSLTYL--XXXXXXXXXXXDVVKPVFANLKQLEEFSVMGMVYLLQQLKPH 673
           GMDVLTN+LHNSL YL             D  +PVF++L+QLEE+S+ GM+ LLQQ++PH
Sbjct: 120 GMDVLTNILHNSLAYLNSNCGGGSSNVNSDEAEPVFSDLRQLEEYSLAGMICLLQQVRPH 179

Query: 674 LSKGDAMWCILMSNLHLGRASMMAIPVLHSPASDNQC 784
           L+KGDAMWC+LM +LH+GRAS + IPVL SP ++N C
Sbjct: 180 LTKGDAMWCLLMCDLHVGRASTIEIPVLPSPINNNGC 216


>ref|XP_003549979.1| PREDICTED: MND1-interacting protein 1-like [Glycine max]
          Length = 721

 Score =  234 bits (598), Expect = 1e-59
 Identities = 127/212 (59%), Positives = 155/212 (73%), Gaps = 20/212 (9%)
 Frame = +2

Query: 176 MGLTMREKHIRPNRRQRSSKPDNDHSGKSGIN----ESGTKLFNHQVGVN---QNPNS-- 328
           MG TMREKHIR NRR RS KPD D   K  I+    ESG K F + +G+N   Q+PNS  
Sbjct: 1   MGCTMREKHIRANRRPRSVKPDPDSCDKDAISKSIAESGLKPFKYHLGLNDSSQSPNSIP 60

Query: 329 HSCDSGWGYCTEEQLEEILLKNMELLYSEAVSKLISLGYDEDVAVKAILRNGNYYNGGMD 508
           ++ ++GWGYCTEEQLEEILLKN+E +Y+EAVSKL++LGYDEDVAVKAILRNG+ Y GGMD
Sbjct: 61  NAEETGWGYCTEEQLEEILLKNLEFIYNEAVSKLVALGYDEDVAVKAILRNGHCY-GGMD 119

Query: 509 VLTNVLHNSLTYL-----------XXXXXXXXXXXDVVKPVFANLKQLEEFSVMGMVYLL 655
           VLTN+LHNSL +L                      D   PVF++L+QLEE+S+ GM+ LL
Sbjct: 120 VLTNILHNSLAFLNSNSDSGGGGGGAGYNSNGGNLDESDPVFSDLRQLEEYSLAGMLCLL 179

Query: 656 QQLKPHLSKGDAMWCILMSNLHLGRASMMAIP 751
           QQ++PHLSKGDAMWC+LMS+LH+GRAS M IP
Sbjct: 180 QQVRPHLSKGDAMWCLLMSDLHVGRASAMEIP 211


>ref|XP_003524049.1| PREDICTED: MND1-interacting protein 1-like [Glycine max]
          Length = 733

 Score =  233 bits (593), Expect = 5e-59
 Identities = 126/209 (60%), Positives = 154/209 (73%), Gaps = 16/209 (7%)
 Frame = +2

Query: 176 MGLTMREKHIRPNRRQRSSKPDNDHSGKSGIN----ESGTKLFNHQVGVN---QNPNSHS 334
           MG TMREKHIR NRR RS KPD+D   K  I+    ESG K F + + +N   Q+PNS+ 
Sbjct: 17  MGCTMREKHIRANRRPRSVKPDSDSCDKDAISKSIAESGLKPFKYHLDLNDSSQSPNSNP 76

Query: 335 C--DSGWGYCTEEQLEEILLKNMELLYSEAVSKLISLGYDEDVAVKAILRNGNYYNGGMD 508
              ++GWGYCTEEQLEEILLKN+E +Y+EAVSKL++LGYD DVAVKAILRNG+ Y GGMD
Sbjct: 77  NVEETGWGYCTEEQLEEILLKNLEFIYNEAVSKLVALGYDGDVAVKAILRNGHCY-GGMD 135

Query: 509 VLTNVLHNSLTYLXXXXXXXXXXXD-------VVKPVFANLKQLEEFSVMGMVYLLQQLK 667
           VLTN+LHNSL +L                     +PVF++L+QLEE+S+ GMV LLQQ++
Sbjct: 136 VLTNILHNSLAFLNTNSDGDGGGYSSNGGNLHESEPVFSDLRQLEEYSLAGMVCLLQQVR 195

Query: 668 PHLSKGDAMWCILMSNLHLGRASMMAIPV 754
           PHLSKGDAMWC+LMS+LH+GRAS M IPV
Sbjct: 196 PHLSKGDAMWCLLMSDLHVGRASAMEIPV 224


>ref|XP_002519838.1| synaptonemal complex protein, putative [Ricinus communis]
           gi|223540884|gb|EEF42442.1| synaptonemal complex
           protein, putative [Ricinus communis]
          Length = 781

 Score =  223 bits (568), Expect = 4e-56
 Identities = 122/210 (58%), Positives = 149/210 (70%), Gaps = 18/210 (8%)
 Frame = +2

Query: 176 MGLTMREKHIRPNRRQRSSKPDND-----HSGKSGINESGTKLFNHQVGV------NQNP 322
           MG T+REKHIR NRR RS+KP+ D      S    I ESG K   + +G+      N NP
Sbjct: 47  MGCTVREKHIRTNRRARSAKPEFDPCCYASSISKSILESGLKPLAYHLGLHDPTHTNPNP 106

Query: 323 NSHSC---DSGWGYCTEEQLEEILLKNMELLYSEAVSKLISLGYDEDVAVKAILRNGNYY 493
           NS +    D+GWGYCTEEQLEEILLKN+E LY EA++KL+SLGYDED A+KAILRNG+ Y
Sbjct: 107 NSSNANLEDNGWGYCTEEQLEEILLKNLEFLYKEAIAKLVSLGYDEDTALKAILRNGHCY 166

Query: 494 NGGMDVLTNVLHNSLTYL----XXXXXXXXXXXDVVKPVFANLKQLEEFSVMGMVYLLQQ 661
            GGMDVLTN+LHNSL +L               D  +PVF +L+QLEE+S+  MV LLQQ
Sbjct: 167 -GGMDVLTNILHNSLAHLNSNSGTNCSSSHGSLDESEPVFNDLRQLEEYSLAAMVCLLQQ 225

Query: 662 LKPHLSKGDAMWCILMSNLHLGRASMMAIP 751
           ++PHLSKGDAMWC+LMS+LH+GRAS + IP
Sbjct: 226 VRPHLSKGDAMWCLLMSDLHVGRASTIEIP 255


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