BLASTX nr result

ID: Bupleurum21_contig00021239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021239
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633682.1| PREDICTED: uncharacterized protein LOC100250...    83   3e-14
ref|XP_002328539.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_003556495.1| PREDICTED: uncharacterized protein LOC100776...    72   5e-11
ref|XP_002512315.1| breast carcinoma amplified sequence, putativ...    70   2e-10
ref|XP_004135794.1| PREDICTED: uncharacterized protein LOC101212...    67   2e-09

>ref|XP_003633682.1| PREDICTED: uncharacterized protein LOC100250287 [Vitis vinifera]
          Length = 986

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 53/92 (57%), Positives = 64/92 (69%), Gaps = 6/92 (6%)
 Frame = -1

Query: 568  SVVTGDVSNASSNRSDLSMNIIEEELGHEEM----QYFEEGYCKAN-LDGSNDLIEHVND 404
            SV T + SN SSNRSD SMNI++E  G  E     QYF+EGYCKA+ LD   +L E V D
Sbjct: 897  SVGTSEASNTSSNRSDSSMNILDE--GPVEPLYFGQYFQEGYCKASTLDECRELTE-VTD 953

Query: 403  VDNIMSQCNKGNSEEEE-DDDMLGGVFDFSEE 311
            VD+  S C++  SEE+E +DDMLGGVF FSEE
Sbjct: 954  VDSGSSPCDREKSEEDENNDDMLGGVFAFSEE 985


>ref|XP_002328539.1| predicted protein [Populus trichocarpa] gi|222838254|gb|EEE76619.1|
            predicted protein [Populus trichocarpa]
          Length = 973

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 45/89 (50%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
 Frame = -1

Query: 559  TGDVSNASSNRSDLSMNIIEEELGHEEMQY---FEEGYCKAN-LDGSNDLIEHVNDVDNI 392
            T + SN SS RSDLSMNII+E   +    +   F+EGYCK + L+   +  E +  VDN 
Sbjct: 877  TSEASNLSSIRSDLSMNIIDEGPANYSPDFELFFQEGYCKVSELNECQESTEVLTFVDNS 936

Query: 391  MSQCNKGNSEEEED-DDMLGGVFDFSEEG 308
             S C+   SEE+ D DDMLGGVF FSEEG
Sbjct: 937  SSPCDVDKSEEDGDNDDMLGGVFSFSEEG 965


>ref|XP_003556495.1| PREDICTED: uncharacterized protein LOC100776558 [Glycine max]
          Length = 910

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 4/87 (4%)
 Frame = -1

Query: 556  GDVSNASSNRSDLSMNIIEEELGHEEM---QYFEEGYCKANLDGSNDLIEHVNDVDNIMS 386
            GD  N+S +  DL+MN+  EE   +     QYF+EGYCKA++D  ++  E + DVD   S
Sbjct: 826  GDSFNSSLSGCDLNMNVTCEESIRDSPDFEQYFQEGYCKASVD-CHESTEVITDVD-CSS 883

Query: 385  QCNKGNSEEEED-DDMLGGVFDFSEEG 308
             C +G S+E+ D DDMLG VFDFSEEG
Sbjct: 884  PCGRGKSDEDGDNDDMLGDVFDFSEEG 910


>ref|XP_002512315.1| breast carcinoma amplified sequence, putative [Ricinus communis]
            gi|223548276|gb|EEF49767.1| breast carcinoma amplified
            sequence, putative [Ricinus communis]
          Length = 991

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 43/90 (47%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
 Frame = -1

Query: 568  SVVTGDVSNASSNRSDLSMNIIEEELGHEEM---QYFEEGYCKANLDGSNDLIEHVNDVD 398
            S +T D SNASSNRSDLSMNII+E    + +   Q F+EGYCK +          V+   
Sbjct: 892  SGLTSDASNASSNRSDLSMNIIDEGPTIDSLDFEQLFQEGYCKVSALNECHESTEVSFAG 951

Query: 397  NIMSQCNKGNSEEEEDDDMLGGVFDFSEEG 308
            N  S   +   E+ ++DDMLGGVF FSEEG
Sbjct: 952  NNCSPDLEKFEEDGDNDDMLGGVFAFSEEG 981


>ref|XP_004135794.1| PREDICTED: uncharacterized protein LOC101212289 [Cucumis sativus]
            gi|449485885|ref|XP_004157300.1| PREDICTED:
            uncharacterized protein LOC101231149 [Cucumis sativus]
          Length = 989

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 45/86 (52%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
 Frame = -1

Query: 547  SNASSNRSDLSMNIIEEELGHEEMQY---FEEGYCKAN-LDGSNDLIEHV-NDVDNIMSQ 383
            SN SSNRSDLSMNI++E    +   Y   F+E YCKA  L    D  E V +D+D+  S 
Sbjct: 904  SNTSSNRSDLSMNILDEGPMGDSFDYEPFFQEEYCKATGLSNCRDPAEAVADDMDSSGSP 963

Query: 382  CNKGNSEEEED-DDMLGGVFDFSEEG 308
              +  SEE+ D DDMLGGVF FSEEG
Sbjct: 964  HYREKSEEDGDTDDMLGGVFAFSEEG 989


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