BLASTX nr result

ID: Bupleurum21_contig00021236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021236
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16502.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002283522.1| PREDICTED: uncharacterized transporter lpg16...    91   1e-16
ref|XP_002527073.1| amino acid transporter, putative [Ricinus co...    89   5e-16
ref|XP_002299117.1| neutral amino acid transport protein [Populu...    89   5e-16
ref|XP_002884975.1| amino acid permease family protein [Arabidop...    88   8e-16

>emb|CBI16502.3| unnamed protein product [Vitis vinifera]
          Length = 829

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/66 (66%), Positives = 53/66 (80%), Gaps = 4/66 (6%)
 Frame = +3

Query: 3   LRLPALVIMCLIPCAFLIVIMVIATKIVFLISGLMTLGSIGWYFLIKYAKSKKWF----E 170
           +RLP L+IMCLIP  FLIVIM IATKIV+LISGL+T+  IGWY+L+K+ K KKWF    E
Sbjct: 264 MRLPGLIIMCLIPSGFLIVIMAIATKIVYLISGLVTVFGIGWYYLMKFCKKKKWFKFSHE 323

Query: 171 FNNGNE 188
           FNN N+
Sbjct: 324 FNNMNK 329



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/60 (53%), Positives = 42/60 (70%)
 Frame = +3

Query: 9   LPALVIMCLIPCAFLIVIMVIATKIVFLISGLMTLGSIGWYFLIKYAKSKKWFEFNNGNE 188
           LP LVIMCL+P  FL+ +M IATK V ++SGL+TL  I WYFL+ + KS+ W  F+   E
Sbjct: 736 LPGLVIMCLVPSGFLVFVMAIATKTVCMVSGLLTLVGIFWYFLMNFCKSRMWLGFDTVRE 795


>ref|XP_002283522.1| PREDICTED: uncharacterized transporter lpg1691-like [Vitis
           vinifera]
          Length = 473

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 40/59 (67%), Positives = 51/59 (86%)
 Frame = +3

Query: 3   LRLPALVIMCLIPCAFLIVIMVIATKIVFLISGLMTLGSIGWYFLIKYAKSKKWFEFNN 179
           +RLP L+IMCLIP  FLIVIM IATKIV+LISGL+T+  IGWY+L+K+ K KKWF+F++
Sbjct: 400 MRLPGLIIMCLIPSGFLIVIMAIATKIVYLISGLVTVFGIGWYYLMKFCKKKKWFKFSH 458


>ref|XP_002527073.1| amino acid transporter, putative [Ricinus communis]
           gi|223533578|gb|EEF35317.1| amino acid transporter,
           putative [Ricinus communis]
          Length = 465

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 38/58 (65%), Positives = 51/58 (87%)
 Frame = +3

Query: 3   LRLPALVIMCLIPCAFLIVIMVIATKIVFLISGLMTLGSIGWYFLIKYAKSKKWFEFN 176
           +RLP L+IMCLIP  FL++IM IATK V+L+SGLMT+G+IGWYFL+K+ KSKK F+++
Sbjct: 401 MRLPGLIIMCLIPSGFLVLIMAIATKTVYLVSGLMTVGAIGWYFLMKFCKSKKLFKYS 458


>ref|XP_002299117.1| neutral amino acid transport protein [Populus trichocarpa]
           gi|222846375|gb|EEE83922.1| neutral amino acid transport
           protein [Populus trichocarpa]
          Length = 471

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 36/60 (60%), Positives = 53/60 (88%)
 Frame = +3

Query: 3   LRLPALVIMCLIPCAFLIVIMVIATKIVFLISGLMTLGSIGWYFLIKYAKSKKWFEFNNG 182
           +RLP L+IMCL+P AFL++IM IATK V+L+SGLMT+G+IG+YF + + K+K+WF+F++G
Sbjct: 407 MRLPGLIIMCLVPSAFLVLIMAIATKTVYLVSGLMTVGAIGFYFFMNFCKTKQWFKFSSG 466


>ref|XP_002884975.1| amino acid permease family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297330815|gb|EFH61234.1| amino acid permease
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 478

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 10/76 (13%)
 Frame = +3

Query: 3   LRLPALVIMCLIPCAFLIVIMVIATKIVFLISGLMTLGSIGWYFLIKYAKSKKWFEFN-- 176
           L++P LV+MCLIP AFL++I+V ATKIV+LI G+MT+G+IGWYFLI Y + KK F+FN  
Sbjct: 399 LKIPGLVVMCLIPSAFLVLIIVFATKIVYLICGVMTIGAIGWYFLINYFRKKKIFKFNEV 458

Query: 177 --------NGNEYKID 200
                   NG   K+D
Sbjct: 459 IDDLDNNVNGEHPKVD 474


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