BLASTX nr result

ID: Bupleurum21_contig00021223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021223
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307770.1| acyl:coa ligase [Populus trichocarpa] gi|222...   177   1e-42
ref|XP_002300662.1| acyl:coa ligase [Populus trichocarpa] gi|222...   176   2e-42
ref|XP_002510640.1| AMP dependent CoA ligase, putative [Ricinus ...   176   2e-42
ref|XP_002285920.1| PREDICTED: 4-coumarate--CoA ligase-like 5 [V...   175   3e-42
ref|XP_004145532.1| PREDICTED: 4-coumarate--CoA ligase-like 5-li...   174   5e-42

>ref|XP_002307770.1| acyl:coa ligase [Populus trichocarpa] gi|222857219|gb|EEE94766.1|
           acyl:coa ligase [Populus trichocarpa]
          Length = 554

 Score =  177 bits (448), Expect = 1e-42
 Identities = 95/151 (62%), Positives = 113/151 (74%), Gaps = 16/151 (10%)
 Frame = +2

Query: 2   ALIDAATGHHLTFSDLWIAVDSVSTALSNLGIRKADVVLLLSPNSIYFPIICLAVMSLGA 181
           A IDAATG HL+F DLW AVDSVST L ++GIRK  V+LLLSPNSI+FPI+CL+VMSLGA
Sbjct: 53  AFIDAATGRHLSFKDLWKAVDSVSTCLYDMGIRKGHVILLLSPNSIFFPIVCLSVMSLGA 112

Query: 182 VITTTNPLNTSSEIAKQIADSKPKLAFTVPELLPKI--ADSNLAVVLIGE---------- 325
           VITTTNPLNT  EIAKQIA+SKP LAFT PELL K+  ++SNL ++LI +          
Sbjct: 113 VITTTNPLNTPREIAKQIANSKPSLAFTTPELLAKLTESNSNLTIILIDDGITDASTKTN 172

Query: 326 ----TNFETMMKTKPSQSRVRDRVNQDDTAT 406
               T    M+K +PS  RVR++VNQDDTAT
Sbjct: 173 AKIVTTLSEMVKKEPSGIRVREQVNQDDTAT 203


>ref|XP_002300662.1| acyl:coa ligase [Populus trichocarpa] gi|222842388|gb|EEE79935.1|
           acyl:coa ligase [Populus trichocarpa]
          Length = 554

 Score =  176 bits (446), Expect = 2e-42
 Identities = 93/150 (62%), Positives = 112/150 (74%), Gaps = 15/150 (10%)
 Frame = +2

Query: 2   ALIDAATGHHLTFSDLWIAVDSVSTALSNLGIRKADVVLLLSPNSIYFPIICLAVMSLGA 181
           A IDAATG HL+F DLW AVDSV+T L ++GIRK  V+LLLSPNSI+FPI+CL+VM LGA
Sbjct: 54  AFIDAATGRHLSFKDLWRAVDSVATCLHDMGIRKGQVILLLSPNSIFFPIVCLSVMWLGA 113

Query: 182 VITTTNPLNTSSEIAKQIADSKPKLAFTVPELLPKIAD--SNLAVVLIGE---------- 325
           +ITTTNPLNT  EIAKQIA+SKP LAFT PEL+ K+ +  SNL +VLI +          
Sbjct: 114 IITTTNPLNTPREIAKQIANSKPSLAFTTPELVSKLTESSSNLPIVLIDDETGTSIKTKA 173

Query: 326 ---TNFETMMKTKPSQSRVRDRVNQDDTAT 406
              T    M+K +P +SRVR+RVNQDDTAT
Sbjct: 174 NILTTLSEMVKREPRESRVRERVNQDDTAT 203


>ref|XP_002510640.1| AMP dependent CoA ligase, putative [Ricinus communis]
           gi|223551341|gb|EEF52827.1| AMP dependent CoA ligase,
           putative [Ricinus communis]
          Length = 549

 Score =  176 bits (445), Expect = 2e-42
 Identities = 92/147 (62%), Positives = 112/147 (76%), Gaps = 12/147 (8%)
 Frame = +2

Query: 2   ALIDAATGHHLTFSDLWIAVDSVSTALSNLGIRKADVVLLLSPNSIYFPIICLAVMSLGA 181
           A IDA TG HL+FSDLW AVDSV+  L ++GIRK  VVLLLSPNSI+FPI+CL+VMSLGA
Sbjct: 53  AFIDATTGRHLSFSDLWKAVDSVANCLCDMGIRKGHVVLLLSPNSIFFPIVCLSVMSLGA 112

Query: 182 VITTTNPLNTSSEIAKQIADSKPKLAFTVPELLPKIAD--SNLAVVLIGE---------- 325
           +ITTTNPLNT  EIAKQIADSKP LAFT P+L+PK+ +  SNL +VLI +          
Sbjct: 113 IITTTNPLNTPREIAKQIADSKPLLAFTTPQLVPKLTESSSNLPIVLIDDDDHNCSAKIL 172

Query: 326 TNFETMMKTKPSQSRVRDRVNQDDTAT 406
           T    MM  +PS++RV++RV+ DDTAT
Sbjct: 173 TTLTEMMTKEPSENRVKERVSMDDTAT 199


>ref|XP_002285920.1| PREDICTED: 4-coumarate--CoA ligase-like 5 [Vitis vinifera]
          Length = 549

 Score =  175 bits (444), Expect = 3e-42
 Identities = 90/146 (61%), Positives = 113/146 (77%), Gaps = 11/146 (7%)
 Frame = +2

Query: 2   ALIDAATGHHLTFSDLWIAVDSVSTALSNLGIRKADVVLLLSPNSIYFPIICLAVMSLGA 181
           A IDAA+GH L+F ++W AVD+VS+ L+++GIRK  V+LLLSPNSI FPI+CL+VMSLGA
Sbjct: 53  AFIDAASGHRLSFYEVWRAVDAVSSCLADMGIRKGHVILLLSPNSILFPIVCLSVMSLGA 112

Query: 182 VITTTNPLNTSSEIAKQIADSKPKLAFTVPELLPKIADSNLAVVLIGET----------- 328
           VITTTNPLNT+ EI KQIADSKP LAFT+P L+PK+A SNL +VL+G             
Sbjct: 113 VITTTNPLNTAREIGKQIADSKPVLAFTIPSLVPKLAGSNLPIVLMGGEGNTPAPAGVVG 172

Query: 329 NFETMMKTKPSQSRVRDRVNQDDTAT 406
           + E MM+ +PS  RV +RVNQ+DTAT
Sbjct: 173 SLEEMMRREPSGKRVGERVNQEDTAT 198


>ref|XP_004145532.1| PREDICTED: 4-coumarate--CoA ligase-like 5-like [Cucumis sativus]
           gi|449485129|ref|XP_004157077.1| PREDICTED:
           4-coumarate--CoA ligase-like 5-like [Cucumis sativus]
          Length = 550

 Score =  174 bits (442), Expect = 5e-42
 Identities = 90/145 (62%), Positives = 113/145 (77%), Gaps = 10/145 (6%)
 Frame = +2

Query: 2   ALIDAATGHHLTFSDLWIAVDSVSTALSNLGIRKADVVLLLSPNSIYFPIICLAVMSLGA 181
           ALIDA+TGHH+T+SDLW AV SV+++LS++GIRK  V+LLLSPNSI+FPIICLAVMS+GA
Sbjct: 55  ALIDASTGHHITYSDLWNAVHSVASSLSDMGIRKGHVILLLSPNSIHFPIICLAVMSIGA 114

Query: 182 VITTTNPLNTSSEIAKQIADSKPKLAFTVPELLPKIADSNLAVVLIG----------ETN 331
           +ITTTNPLNT  EI+KQI+DSKP LAFT   L+PKIA S L VV+I            + 
Sbjct: 115 IITTTNPLNTPQEISKQISDSKPILAFTTQALIPKIATSKLPVVVIDGQIPKSQAKIVST 174

Query: 332 FETMMKTKPSQSRVRDRVNQDDTAT 406
              MM+ KPS S++++RV Q+DTAT
Sbjct: 175 LSEMMRKKPSGSQIKERVEQNDTAT 199


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