BLASTX nr result

ID: Bupleurum21_contig00021212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021212
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302301.1| methyl binding domain protein [Populus trich...   130   4e-28
ref|XP_002306571.1| methyl binding domain protein [Populus trich...   129   1e-27
ref|XP_002284140.2| PREDICTED: uncharacterized protein LOC100248...   117   4e-24
emb|CBI19167.3| unnamed protein product [Vitis vinifera]              107   3e-21
ref|XP_003523814.1| PREDICTED: uncharacterized protein LOC100780...   107   4e-21

>ref|XP_002302301.1| methyl binding domain protein [Populus trichocarpa]
           gi|222844027|gb|EEE81574.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 1276

 Score =  130 bits (327), Expect = 4e-28
 Identities = 112/310 (36%), Positives = 151/310 (48%), Gaps = 27/310 (8%)
 Frame = +3

Query: 3   VDLRLLSQSELYALSLCSASAFDPHR----TDDVVIPKIDRTVFNESAGSRKQTYSRLRL 170
           +DLR LSQSEL +LS CS+S   PHR    T DV  PKIDR+VFNESAGSRKQT+SRLRL
Sbjct: 25  IDLRHLSQSELLSLSFCSSS---PHRLRTDTADVSTPKIDRSVFNESAGSRKQTFSRLRL 81

Query: 171 APASSSFASICRRTPHLRIPKPSSVETDPERAENSKIVAMLKALFSSKSSG--------N 326
           AP +++ +     TP   +    + E  P   ENS+I+++LK+LF S S+         +
Sbjct: 82  APRNNNASPSSNSTP---VVPFQNTERQPLDEENSQIISLLKSLFGSDSNSIENKNEHYH 138

Query: 327 GVVSIPPPVVYT----APAPIQVES--------NRGDGSVKSNADLNNSM---MSVGIKQ 461
            +VSI  PV+Y      P+    ES        +   G +K   ++N+S+    +    +
Sbjct: 139 KLVSI--PVIYNDYMRLPSTNNAESQNVSIDIWDSSQGGLK-RLEVNHSISIRTAESSSK 195

Query: 462 KRGRGRPRKDENGVVPAKIEIRDIFIYDNAVKREDNVVSYLLNNSNAMXXXXXXXXXXXX 641
           KR RGRPRK+EN                  V  ++N  S L+ N                
Sbjct: 196 KRKRGRPRKNEN------------------VNFDNNDNSELVENKTI------------- 224

Query: 642 XTIPMVVVPERNEVKEVVVYDNYVENDKDVLSSSNDNEILNTKGVVVDVLALASMEDPFG 821
                            VV DN     K       +  ++N  GVVVD  AL +MEDP+G
Sbjct: 225 ----------------AVVCDNVEVESK----KKEEMVMVNKNGVVVDFGALGNMEDPYG 264

Query: 822 PEIRRRTEGM 851
            E+RRRTEGM
Sbjct: 265 EELRRRTEGM 274


>ref|XP_002306571.1| methyl binding domain protein [Populus trichocarpa]
           gi|222856020|gb|EEE93567.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 1248

 Score =  129 bits (323), Expect = 1e-27
 Identities = 107/304 (35%), Positives = 149/304 (49%), Gaps = 21/304 (6%)
 Frame = +3

Query: 3   VDLRLLSQSELYALSLCSASAFDPHR----TDDVVIPKIDRTVFNESAGSRKQTYSRLRL 170
           +DLR LSQ EL +LS CS+S+   HR    T DV  PKIDR+VFNESAGSRKQT+SRLRL
Sbjct: 25  IDLRHLSQPELLSLSFCSSSS-SLHRLQTDTADVSTPKIDRSVFNESAGSRKQTFSRLRL 83

Query: 171 APASSSFASICRRTPHLRIPKPSSVETDPERAENSKIVAMLKALFSSKS--------SGN 326
           AP +++ +S    TP   +      E  P   ENS+I+ +LK+LF S S        + +
Sbjct: 84  APRNNNASSSSNSTP---VVPYQITERHPLDEENSQIIYLLKSLFGSDSHFIENNNENNH 140

Query: 327 GVVSIPPPVVYTAPAPIQVESNR-------GDGSVKSNA--DLNNSMMSVGIKQKRGRGR 479
            +VS+  PV+Y     +   +N          G VKS     L ++ ++    +KR RGR
Sbjct: 141 NLVSV--PVIYNEYMRLPCTNNAELQNVGFSQGGVKSLEVNHLISTRIAESSSKKRKRGR 198

Query: 480 PRKDENGVVPAKIEIRDIFIYDNAVKREDNVVSYLLNNSNAMXXXXXXXXXXXXXTIPMV 659
           PRK+EN           +    N ++    +                             
Sbjct: 199 PRKNEN-----------VDFGYNELEERGKI----------------------------- 218

Query: 660 VVPERNEVKEVVVYDNYVENDKDVLSSSNDNEILNTKGVVVDVLALASMEDPFGPEIRRR 839
                N+   VV  D  V+N K       + E+++  GVVVD +AL +MEDP+G E+RRR
Sbjct: 219 ----ENKTIVVVCDDVEVQNKK-----KEEMEMVSKNGVVVDFVALGNMEDPYGEELRRR 269

Query: 840 TEGM 851
           TEGM
Sbjct: 270 TEGM 273


>ref|XP_002284140.2| PREDICTED: uncharacterized protein LOC100248904 [Vitis vinifera]
          Length = 947

 Score =  117 bits (292), Expect = 4e-24
 Identities = 73/197 (37%), Positives = 102/197 (51%)
 Frame = +3

Query: 3   VDLRLLSQSELYALSLCSASAFDPHRTDDVVIPKIDRTVFNESAGSRKQTYSRLRLAPAS 182
           +DLR LSQSEL ALSL S+ + D  R DDVVIPKIDR++FNESAGSRKQTYSRLRLAP  
Sbjct: 20  IDLRFLSQSELQALSLTSSHSSDLRRCDDVVIPKIDRSIFNESAGSRKQTYSRLRLAPRK 79

Query: 183 SSFASICRRTPHLRIPKPSSVETDPERAENSKIVAMLKALFSSKSSGNGVVSIPPPVVYT 362
              A+   R P            +P   EN+ I+ +LK LF++++  + ++         
Sbjct: 80  PDIAATIPRRPRFSPHLNQKAALEPVDEENTLIIGLLKGLFATETHADDLI--------- 130

Query: 363 APAPIQVESNRGDGSVKSNADLNNSMMSVGIKQKRGRGRPRKDENGVVPAKIEIRDIFIY 542
              P+QVE       +  N  ++   +     +KR RGRP+ +           + I +Y
Sbjct: 131 ---PVQVEYRESSNEILQNIPID---VVADSGRKRKRGRPKSE-----------KTIAVY 173

Query: 543 DNAVKREDNVVSYLLNN 593
            N    E   +  + NN
Sbjct: 174 QNGGSGEGGGMGIINNN 190


>emb|CBI19167.3| unnamed protein product [Vitis vinifera]
          Length = 1129

 Score =  107 bits (268), Expect = 3e-21
 Identities = 65/151 (43%), Positives = 87/151 (57%)
 Frame = +3

Query: 3   VDLRLLSQSELYALSLCSASAFDPHRTDDVVIPKIDRTVFNESAGSRKQTYSRLRLAPAS 182
           +DLR LSQSEL ALSL S+ + D  R DDVVIPKIDR++FNESAGSRKQTYSRLRLAP  
Sbjct: 22  IDLRFLSQSELQALSLTSSHSSDLRRCDDVVIPKIDRSIFNESAGSRKQTYSRLRLAPRK 81

Query: 183 SSFASICRRTPHLRIPKPSSVETDPERAENSKIVAMLKALFSSKSSGNGVVSIPPPVVYT 362
              A+   R P            +P   EN+ I+ +LK LF++++  + ++         
Sbjct: 82  PDIAATIPRRPRFSPHLNQKAALEPVDEENTLIIGLLKGLFATETHADDLI--------- 132

Query: 363 APAPIQVESNRGDGSVKSNADLNNSMMSVGI 455
              P+QVE  R  G       +NN+ + V +
Sbjct: 133 ---PVQVE-YRESGEGGGMGIINNNGVVVDV 159


>ref|XP_003523814.1| PREDICTED: uncharacterized protein LOC100780637 [Glycine max]
          Length = 877

 Score =  107 bits (266), Expect = 4e-21
 Identities = 98/292 (33%), Positives = 131/292 (44%), Gaps = 9/292 (3%)
 Frame = +3

Query: 3   VDLRLLSQSELYALSLCSASAFDPHRTDD-VVIPKIDRTVFNESAGSRKQTYSRLRL--- 170
           VDLRLLSQ ELY LSL  A+      +DD  VIPKIDR+ FNESAGSRKQTYS+LRL   
Sbjct: 22  VDLRLLSQPELYTLSLSGATHCHRRNSDDDSVIPKIDRSNFNESAGSRKQTYSKLRLNKR 81

Query: 171 -----APASSSFASICRRTPHLRIPKPSSVETDPERAENSKIVAMLKALFSSKSSGNGVV 335
                 PASSSF           IP   S   +PE  ENS+IVA+L+ LF  +   N   
Sbjct: 82  KQNPAVPASSSF----------HIPLHIS---EPEEEENSRIVALLQQLFGVEPLRNAPR 128

Query: 336 SIPPPVVYTAPAPIQVESNRGDGSVKSNADLNNSMMSVGIKQKRGRGRPRKDENGVVPAK 515
           +           P+QV+  +      +  ++   +++   ++KR RGRPRKDEN V    
Sbjct: 129 N---DAAERRLVPVQVDFKQPPPMFAAFQNVPIDVVADSSQRKRKRGRPRKDENSVT--- 182

Query: 516 IEIRDIFIYDNAVKREDNVVSYLLNNSNAMXXXXXXXXXXXXXTIPMVVVPERNEVKEVV 695
                +F+ +                                   P  V  E N V    
Sbjct: 183 -----VFVEE-----------------------------------PKKVTKEENSVTV-- 200

Query: 696 VYDNYVENDKDVLSSSNDNEILNTKGVVVDVLALASMEDPFGPEIRRRTEGM 851
               +VE  K V  +   N  + T    V+   +   EDPF  E++RRT+G+
Sbjct: 201 ----FVEEPKKVNGNGEVNAAVATTTTTVNE-TVGLDEDPFEVELKRRTQGL 247


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