BLASTX nr result

ID: Bupleurum21_contig00021210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021210
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233946.1| alpha-1,4-fucosyltransferase [Solanum lycope...   100   2e-19
ref|XP_002269211.1| PREDICTED: alpha-(1,4)-fucosyltransferase [V...    99   4e-19
ref|XP_002526800.1| alpha-(1,4)-fucosyltransferase, putative [Ri...    90   3e-16
ref|XP_002325549.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_002327342.1| predicted protein [Populus trichocarpa] gi|2...    86   5e-15

>ref|NP_001233946.1| alpha-1,4-fucosyltransferase [Solanum lycopersicum]
           gi|18477220|emb|CAC85740.1| alpha-1,4-fucosyltransferase
           [Solanum lycopersicum]
          Length = 413

 Score =  100 bits (248), Expect = 2e-19
 Identities = 54/108 (50%), Positives = 78/108 (72%), Gaps = 6/108 (5%)
 Frame = +1

Query: 247 KFKSINSLAITMMLGFALLILFFSGFLEFP-SSSFSIPSAEHKLLVPKSGSK--PFKDLF 417
           + KS+N+ AIT+MLGF L+ILFFSGFL+FP  +S SIPS ++++L   S S+  PF +L 
Sbjct: 2   QLKSVNTFAITIMLGFTLIILFFSGFLDFPLHTSSSIPSTKNQILTTISVSEPDPFSNLL 61

Query: 418 GAYTKWDFEVGCPQFRHKHQGLMKHNGSV---SISSLQNVDGGDVQCS 552
             + KWD +VGC +FR +H+GL+  NG +   S  SLQNVD G+++C+
Sbjct: 62  STFKKWDSQVGCAKFRGEHKGLL-GNGLLLDSSSGSLQNVDDGELKCN 108


>ref|XP_002269211.1| PREDICTED: alpha-(1,4)-fucosyltransferase [Vitis vinifera]
           gi|147812436|emb|CAN67769.1| hypothetical protein
           VITISV_039237 [Vitis vinifera]
           gi|296081071|emb|CBI18265.3| unnamed protein product
           [Vitis vinifera]
          Length = 403

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 54/101 (53%), Positives = 67/101 (66%)
 Frame = +1

Query: 253 KSINSLAITMMLGFALLILFFSGFLEFPSSSFSIPSAEHKLLVPKSGSKPFKDLFGAYTK 432
           KS+N+LAI  MLGFA LIL F    ++PS+S SIPS      +    S PF+DL GA+ K
Sbjct: 4   KSVNTLAIATMLGFAFLILLFFSSFQYPSASTSIPSLNMSTFLNHHTSDPFRDLLGAFKK 63

Query: 433 WDFEVGCPQFRHKHQGLMKHNGSVSISSLQNVDGGDVQCSV 555
           WD +VGC  FR  H+GL+K NGS   SSLQ+VD GD+ C V
Sbjct: 64  WDSQVGCSSFRETHKGLIK-NGS---SSLQDVD-GDLDCGV 99


>ref|XP_002526800.1| alpha-(1,4)-fucosyltransferase, putative [Ricinus communis]
           gi|223533804|gb|EEF35535.1|
           alpha-(1,4)-fucosyltransferase, putative [Ricinus
           communis]
          Length = 420

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 52/111 (46%), Positives = 67/111 (60%), Gaps = 11/111 (9%)
 Frame = +1

Query: 253 KSINSLAITMMLGFALLILFFSGFLEFPSSSFSIPS-AEHKLLVPKSGS--KPFKDLFGA 423
           K +NS  I +M+ F  LILFFSGF+EFPS + SIPS  E +L    S S   PF DLFGA
Sbjct: 4   KPLNSYTIALMMFFTFLILFFSGFIEFPSVTSSIPSPIEARLATTTSSSTPDPFVDLFGA 63

Query: 424 YTKWDFEVGCPQFRHKHQGLMK--------HNGSVSISSLQNVDGGDVQCS 552
           + +WD +VGC QFR K + L+          N + S++SLQ V G D  C+
Sbjct: 64  FKRWDSQVGCDQFREKFRDLINLRSFSSSGSNNNRSVASLQVVGGDDSGCN 114


>ref|XP_002325549.1| predicted protein [Populus trichocarpa] gi|222862424|gb|EEE99930.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 53/105 (50%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
 Frame = +1

Query: 247 KFKSINSLAITMMLGFALLILFFSGFLEFPSSSFSIPSAEHKLLVP-KSGSKPFKDLFGA 423
           + K +N+  IT+ML F ++ILFFSGFLEFPS + SI S       P K+   PF DLF A
Sbjct: 2   QLKPLNTYTITLMLFFTIIILFFSGFLEFPSIATSITSPIKDPNFPVKTTPDPFTDLFVA 61

Query: 424 YTKWDFEVGCPQFRHKHQ--GLMKHNGSVSISSLQNVDGGDVQCS 552
           + KWD +VGC QFR KH+  G     G+   +SLQ VD GDV CS
Sbjct: 62  FKKWDSQVGCVQFREKHKNLGSFGSKGTNGSASLQVVD-GDVGCS 105


>ref|XP_002327342.1| predicted protein [Populus trichocarpa] gi|222835712|gb|EEE74147.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score = 85.5 bits (210), Expect = 5e-15
 Identities = 51/108 (47%), Positives = 66/108 (61%), Gaps = 6/108 (5%)
 Frame = +1

Query: 247 KFKSINSLAITMMLGFALLILFFSGFLEFPSSSFSIPSAEHKLLVP-KSGSKPFKDLFGA 423
           + K +++  IT+ML F ++ILFFSGFLEFPS + SI S+      P K+   PF DLF A
Sbjct: 2   QLKPLSTYTITLMLFFTVIILFFSGFLEFPSITTSITSSIKDSNFPIKTAPDPFTDLFIA 61

Query: 424 YTKWDFEVGCPQFRHKHQ-----GLMKHNGSVSISSLQNVDGGDVQCS 552
           + KWD +VGC QFR K++     G    NGSVS+     V  GDV CS
Sbjct: 62  FKKWDSQVGCVQFREKYKNLDSFGSKGSNGSVSV----QVVNGDVGCS 105


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