BLASTX nr result

ID: Bupleurum21_contig00021201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021201
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515181.1| protein transport protein sec23, putative [R...   106   2e-21
ref|XP_002281404.1| PREDICTED: protein transport protein SEC23 [...   100   9e-20
ref|XP_002301552.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_003554575.1| PREDICTED: protein transport protein Sec23A-...    99   4e-19
ref|XP_004166185.1| PREDICTED: LOW QUALITY PROTEIN: protein tran...    98   6e-19

>ref|XP_002515181.1| protein transport protein sec23, putative [Ricinus communis]
           gi|223545661|gb|EEF47165.1| protein transport protein
           sec23, putative [Ricinus communis]
          Length = 834

 Score =  106 bits (265), Expect = 2e-21
 Identities = 60/140 (42%), Positives = 79/140 (56%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   SPSVRTPS-PNSVTQPNQIRSPSVRTPSPNSVVQPNLMXXXXXXXXXXXXXXXXNGIRDG 178
           SP +  P  P  + Q +Q+ SPS++TP        NL+                NG+  G
Sbjct: 33  SPPILAPRFPPPILQQDQVLSPSIKTP--------NLLSSA-------------NGVNIG 71

Query: 179 RPVPHLSTPPAAPRFSSPIQTPVVPYRTSHPSHRSLAFTSGSNLPMSSPPQCSNGSIELQ 358
            P+PHLSTPP  P FSSP++   VP+RTS  + + +AF+SGS+LP SSPP   NGS ELQ
Sbjct: 72  SPIPHLSTPPGPPVFSSPVRPAAVPFRTSPATPQPIAFSSGSSLPTSSPPHFLNGSPELQ 131

Query: 359 HQVSDASEDLFPGTESTNVL 418
           HQV   SED  P  E + +L
Sbjct: 132 HQVPQVSEDSMPAEELSCIL 151


>ref|XP_002281404.1| PREDICTED: protein transport protein SEC23 [Vitis vinifera]
           gi|297744089|emb|CBI37059.3| unnamed protein product
           [Vitis vinifera]
          Length = 874

 Score =  100 bits (250), Expect = 9e-20
 Identities = 60/137 (43%), Positives = 77/137 (56%)
 Frame = +2

Query: 8   SVRTPSPNSVTQPNQIRSPSVRTPSPNSVVQPNLMXXXXXXXXXXXXXXXXNGIRDGRPV 187
           + R P P    Q  QI SPS RTP+  S V                     NG++ G P+
Sbjct: 41  AARFPPPR--LQQEQIPSPSTRTPNLLSPV---------------------NGVKTGSPI 77

Query: 188 PHLSTPPAAPRFSSPIQTPVVPYRTSHPSHRSLAFTSGSNLPMSSPPQCSNGSIELQHQV 367
           PHLSTPP  P FSSP++   VP+RTS  + + +A +S S+LP SSPP  SNGS ELQH+V
Sbjct: 78  PHLSTPPGPPVFSSPLRPAAVPFRTSPATPQPVAISSSSSLPTSSPPYYSNGSAELQHRV 137

Query: 368 SDASEDLFPGTESTNVL 418
           SDA+E+     +S  VL
Sbjct: 138 SDATEESLHLEKSPYVL 154


>ref|XP_002301552.1| predicted protein [Populus trichocarpa] gi|222843278|gb|EEE80825.1|
           predicted protein [Populus trichocarpa]
          Length = 871

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/86 (56%), Positives = 61/86 (70%)
 Frame = +2

Query: 161 NGIRDGRPVPHLSTPPAAPRFSSPIQTPVVPYRTSHPSHRSLAFTSGSNLPMSSPPQCSN 340
           NG++ G PVPHLSTPP  P F+SP++   VP+RTS  + + +AF+SGS LP SSPP  SN
Sbjct: 69  NGVKTGSPVPHLSTPPGPPVFTSPVRPAAVPFRTSPATPQPVAFSSGSTLPTSSPPHFSN 128

Query: 341 GSIELQHQVSDASEDLFPGTESTNVL 418
           GSIELQHQV  A+ D  P  ES+  L
Sbjct: 129 GSIELQHQVPLATNDSTPFEESSCAL 154


>ref|XP_003554575.1| PREDICTED: protein transport protein Sec23A-like [Glycine max]
          Length = 871

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 62/134 (46%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
 Frame = +2

Query: 20  PSPNSVTQPNQIRSPSVRTPSPNSVVQPNLMXXXXXXXXXXXXXXXXNGIRDGRPVPHLS 199
           P P    Q +Q  S SV+TP+   V+ P                   NG+  G PVPHLS
Sbjct: 39  PPPKLHLQQDQASSRSVKTPN---VLSP------------------ANGVTTGSPVPHLS 77

Query: 200 TPPAAPRFSSPIQTPVVPYRTSHPSHRSLAFTSGSNLPMSSPP-QCSNGSIELQHQVSDA 376
           TPP  P F+SP++   VP+RTS  S + LAF+S S+LP SS P Q SNGS E QHQVSD+
Sbjct: 78  TPPGPPVFTSPVRPAAVPFRTSPASPQPLAFSSASSLPTSSSPLQFSNGSFESQHQVSDS 137

Query: 377 SEDLFPGTESTNVL 418
            ED  P  ES+ VL
Sbjct: 138 IEDHVPLGESSFVL 151


>ref|XP_004166185.1| PREDICTED: LOW QUALITY PROTEIN: protein transport protein
           SEC23-1-like [Cucumis sativus]
          Length = 869

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/126 (43%), Positives = 70/126 (55%)
 Frame = +2

Query: 41  QPNQIRSPSVRTPSPNSVVQPNLMXXXXXXXXXXXXXXXXNGIRDGRPVPHLSTPPAAPR 220
           Q +Q+ SPS++TP   S                       NGI+ G P+PHLSTPP  P 
Sbjct: 45  QQDQMPSPSIKTPGAASPA---------------------NGIKTGSPIPHLSTPPGPPV 83

Query: 221 FSSPIQTPVVPYRTSHPSHRSLAFTSGSNLPMSSPPQCSNGSIELQHQVSDASEDLFPGT 400
           F+SPI+   VP+RTS  S + + F+S S+LP S+PP   N S  LQHQ+SD SED     
Sbjct: 84  FTSPIRPAAVPFRTSPASPQPVVFSSASSLPASTPPHFFNASSGLQHQMSDVSEDSTSVA 143

Query: 401 ESTNVL 418
           ES NVL
Sbjct: 144 ESPNVL 149


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