BLASTX nr result

ID: Bupleurum21_contig00021188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021188
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282269.1| PREDICTED: signal recognition particle 9 kDa...   168   4e-40
ref|XP_002302071.1| predicted protein [Populus trichocarpa] gi|2...   168   5e-40
ref|NP_190479.1| signal recognition particle subunit SRP9 [Arabi...   167   8e-40
ref|XP_002306822.1| predicted protein [Populus trichocarpa] gi|1...   167   1e-39
ref|XP_002875940.1| hypothetical protein ARALYDRAFT_906164 [Arab...   166   1e-39

>ref|XP_002282269.1| PREDICTED: signal recognition particle 9 kDa protein [Vitis
           vinifera] gi|297735510|emb|CBI17950.3| unnamed protein
           product [Vitis vinifera]
          Length = 103

 Score =  168 bits (426), Expect = 4e-40
 Identities = 78/94 (82%), Positives = 87/94 (92%)
 Frame = +2

Query: 152 MVYITSWDDFAERSVQLFRAHPDKTRYVMKYRNCDGKLVLKVTDDKECLKFKTDQAQDAK 331
           MVYI SWD+F +RSVQLFRA PD TRYVMKYR+CDGKLVLKVTD++ECLKFKTDQAQDAK
Sbjct: 1   MVYIESWDEFVDRSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 332 KMEKLNNVFFTLMARGPEVDVTEVAGKEQVEAQP 433
           KMEKLNN+FFTLMARGPEVD++EV GKE +E QP
Sbjct: 61  KMEKLNNIFFTLMARGPEVDISEVTGKEAMEVQP 94


>ref|XP_002302071.1| predicted protein [Populus trichocarpa] gi|222843797|gb|EEE81344.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score =  168 bits (425), Expect = 5e-40
 Identities = 79/94 (84%), Positives = 86/94 (91%)
 Frame = +2

Query: 152 MVYITSWDDFAERSVQLFRAHPDKTRYVMKYRNCDGKLVLKVTDDKECLKFKTDQAQDAK 331
           MVY+ SWD+F ERSVQLFRA PD TRYVMKYR+CDGKLVLKVTD+KECLKFKTDQAQDAK
Sbjct: 1   MVYMASWDEFVERSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAK 60

Query: 332 KMEKLNNVFFTLMARGPEVDVTEVAGKEQVEAQP 433
           KMEKLNN FFTLM+RGPE D++EV GKEQ EAQP
Sbjct: 61  KMEKLNNQFFTLMSRGPEADLSEVTGKEQTEAQP 94


>ref|NP_190479.1| signal recognition particle subunit SRP9 [Arabidopsis thaliana]
           gi|12230639|sp|Q9SMU7.1|SRP09_ARATH RecName: Full=Signal
           recognition particle 9 kDa protein; Short=SRP9
           gi|6522556|emb|CAB62000.1| signal recognition particle
           subunit 9-like [Arabidopsis thaliana]
           gi|21553473|gb|AAM62566.1| signal recognition particle 9
           kDa protein SRP9 [Arabidopsis thaliana]
           gi|28466801|gb|AAO44009.1| At3g49100 [Arabidopsis
           thaliana] gi|110736135|dbj|BAF00039.1| signal
           recognition particle subunit 9 - like [Arabidopsis
           thaliana] gi|332644977|gb|AEE78498.1| signal recognition
           particle subunit SRP9 [Arabidopsis thaliana]
          Length = 103

 Score =  167 bits (423), Expect = 8e-40
 Identities = 77/94 (81%), Positives = 88/94 (93%)
 Frame = +2

Query: 152 MVYITSWDDFAERSVQLFRAHPDKTRYVMKYRNCDGKLVLKVTDDKECLKFKTDQAQDAK 331
           MVYI SWD+F +RSVQLFRA P+ TRYVMKYR+CDGKLVLKVTD+KECLKFKTDQAQ+AK
Sbjct: 1   MVYIASWDEFVDRSVQLFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAK 60

Query: 332 KMEKLNNVFFTLMARGPEVDVTEVAGKEQVEAQP 433
           KMEKLNN+FFTLMARGP+VD++EV GKEQ+E QP
Sbjct: 61  KMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQP 94


>ref|XP_002306822.1| predicted protein [Populus trichocarpa] gi|118481739|gb|ABK92809.1|
           unknown [Populus trichocarpa]
           gi|222856271|gb|EEE93818.1| predicted protein [Populus
           trichocarpa]
          Length = 103

 Score =  167 bits (422), Expect = 1e-39
 Identities = 78/93 (83%), Positives = 86/93 (92%)
 Frame = +2

Query: 152 MVYITSWDDFAERSVQLFRAHPDKTRYVMKYRNCDGKLVLKVTDDKECLKFKTDQAQDAK 331
           MVYITSWDDF +RSVQLFRA PD TRYVMKYR+CDGKLVLKVTD+KECLKFKTDQAQD K
Sbjct: 1   MVYITSWDDFVDRSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQDVK 60

Query: 332 KMEKLNNVFFTLMARGPEVDVTEVAGKEQVEAQ 430
           KMEKLNN+FFTLM+RGP+ DV+EV GKEQ EA+
Sbjct: 61  KMEKLNNLFFTLMSRGPDADVSEVTGKEQTEAR 93


>ref|XP_002875940.1| hypothetical protein ARALYDRAFT_906164 [Arabidopsis lyrata subsp.
           lyrata] gi|297321778|gb|EFH52199.1| hypothetical protein
           ARALYDRAFT_906164 [Arabidopsis lyrata subsp. lyrata]
          Length = 103

 Score =  166 bits (421), Expect = 1e-39
 Identities = 76/94 (80%), Positives = 88/94 (93%)
 Frame = +2

Query: 152 MVYITSWDDFAERSVQLFRAHPDKTRYVMKYRNCDGKLVLKVTDDKECLKFKTDQAQDAK 331
           MVYI SWD+F +RSVQ+FRA P+ TRYVMKYR+CDGKLVLKVTD+KECLKFKTDQAQ+AK
Sbjct: 1   MVYIASWDEFVDRSVQIFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAK 60

Query: 332 KMEKLNNVFFTLMARGPEVDVTEVAGKEQVEAQP 433
           KMEKLNN+FFTLMARGP+VD++EV GKEQ+E QP
Sbjct: 61  KMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQP 94


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