BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021158
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307758.1| high mobility group family [Populus trichoca...    86   3e-17
gb|ABK95398.1| unknown [Populus trichocarpa]                           86   3e-17
ref|XP_002889059.1| high mobility group family protein [Arabidop...    83   9e-16
ref|XP_002510615.1| transcription factor, putative [Ricinus comm...    78   1e-15
ref|NP_177738.1| high mobility group-box and ARID domain-binding...    81   3e-15

>ref|XP_002307758.1| high mobility group family [Populus trichocarpa]
           gi|222857207|gb|EEE94754.1| high mobility group family
           [Populus trichocarpa]
          Length = 329

 Score = 85.5 bits (210), Expect(2) = 3e-17
 Identities = 41/70 (58%), Positives = 50/70 (71%), Gaps = 8/70 (11%)
 Frame = -2

Query: 403 DKQYPEPVASH*EVVNAPSLFWDSLRSFHSAMGTKSMVPIIGGNELN----YIFVTKRGG 236
           +K YP P+ASH +VVN PS+FWD+LR FH  MGTK M+P+IGG EL+    Y+  T RGG
Sbjct: 15  NKHYPAPLASHEDVVNDPSVFWDTLRRFHFVMGTKFMIPVIGGKELDLQVLYVETTNRGG 74

Query: 235 YDK----KKW 218
           YDK    KKW
Sbjct: 75  YDKVVAEKKW 84



 Score = 27.7 bits (60), Expect(2) = 3e-17
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 158 LMKHYHGLLY*YEKSTFSSFRGP 90
           L KHY  LLY YE+  F   +GP
Sbjct: 104 LKKHYFSLLYHYEQVHFFKIQGP 126


>gb|ABK95398.1| unknown [Populus trichocarpa]
          Length = 317

 Score = 85.5 bits (210), Expect(2) = 3e-17
 Identities = 41/70 (58%), Positives = 50/70 (71%), Gaps = 8/70 (11%)
 Frame = -2

Query: 403 DKQYPEPVASH*EVVNAPSLFWDSLRSFHSAMGTKSMVPIIGGNELN----YIFVTKRGG 236
           +K YP P+ASH +VVN PS+FWD+LR FH  MGTK M+P+IGG EL+    Y+  T RGG
Sbjct: 3   NKHYPAPLASHEDVVNDPSVFWDTLRRFHFVMGTKFMIPVIGGKELDLQVLYVETTNRGG 62

Query: 235 YDK----KKW 218
           YDK    KKW
Sbjct: 63  YDKVVAEKKW 72



 Score = 27.7 bits (60), Expect(2) = 3e-17
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 158 LMKHYHGLLY*YEKSTFSSFRGP 90
           L KHY  LLY YE+  F   +GP
Sbjct: 92  LKKHYFSLLYHYEQVHFFKIQGP 114


>ref|XP_002889059.1| high mobility group family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297334900|gb|EFH65318.1| high mobility group
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 338

 Score = 82.8 bits (203), Expect(2) = 9e-16
 Identities = 41/73 (56%), Positives = 51/73 (69%), Gaps = 8/73 (10%)
 Frame = -2

Query: 412 PVADKQYPEPVASH*EVVNAPSLFWDSLRSFHSAMGTKSMVPIIGGNELN----YIFVTK 245
           P   K+YPEP+ASH  VV   S+FWD+LR FHS M TK M+P+IGG EL+    Y+ VT+
Sbjct: 21  PAKIKEYPEPLASHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTR 80

Query: 244 RGGYDK----KKW 218
           RGGY+K    KKW
Sbjct: 81  RGGYEKVVAEKKW 93



 Score = 25.4 bits (54), Expect(2) = 9e-16
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 158 LMKHYHGLLY*YEKSTFSSFRGPYL 84
           L KHY  LL+ YE+    + RGP L
Sbjct: 113 LRKHYLNLLFHYEQVHLFTARGPLL 137


>ref|XP_002510615.1| transcription factor, putative [Ricinus communis]
           gi|223551316|gb|EEF52802.1| transcription factor,
           putative [Ricinus communis]
          Length = 338

 Score = 77.8 bits (190), Expect(2) = 1e-15
 Identities = 37/69 (53%), Positives = 47/69 (68%), Gaps = 8/69 (11%)
 Frame = -2

Query: 400 KQYPEPVASH*EVVNAPSLFWDSLRSFHSAMGTKSMVPIIGGNELN----YIFVTKRGGY 233
           + YP P+ASH ++V  P  FWD+LR FHS M TK M+P+IGG EL+    Y+  TKRGGY
Sbjct: 18  RHYPTPLASHDKIVEDPITFWDTLRRFHSLMSTKFMIPVIGGRELDLHILYVEATKRGGY 77

Query: 232 DK----KKW 218
           +K    KKW
Sbjct: 78  EKVVADKKW 86



 Score = 29.6 bits (65), Expect(2) = 1e-15
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1

Query: 158 LMKHYHGLLY*YEKSTFSSFRGP 90
           L KHY GLLY YE+  F   +GP
Sbjct: 106 LRKHYFGLLYHYEQVHFFKVQGP 128


>ref|NP_177738.1| high mobility group-box and ARID domain-binding domain-containing
           protein [Arabidopsis thaliana]
           gi|75265821|sp|Q9SGS2.1|HMGB9_ARATH RecName: Full=High
           mobility group B protein 9; AltName:
           Full=Nucleosome/chromatin assembly factor group D 09;
           Short=Nucleosome/chromatin assembly factor group D 9
           gi|6573729|gb|AAF17649.1|AC009978_25 T23E18.4
           [Arabidopsis thaliana] gi|20466328|gb|AAM20481.1|
           unknown protein [Arabidopsis thaliana]
           gi|31711812|gb|AAP68262.1| At1g76110 [Arabidopsis
           thaliana] gi|332197676|gb|AEE35797.1| high mobility
           group-box and ARID domain-binding domain-containing
           protein [Arabidopsis thaliana]
          Length = 338

 Score = 80.9 bits (198), Expect(2) = 3e-15
 Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 8/77 (10%)
 Frame = -2

Query: 424 LSNIPVADKQYPEPVASH*EVVNAPSLFWDSLRSFHSAMGTKSMVPIIGGNELN----YI 257
           ++  P   K+YPEP+A H  VV   S+FWD+LR FHS M TK M+P+IGG EL+    Y+
Sbjct: 17  MATSPAKIKEYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYV 76

Query: 256 FVTKRGGYDK----KKW 218
            VT+RGGY+K    KKW
Sbjct: 77  EVTRRGGYEKVVVEKKW 93



 Score = 25.4 bits (54), Expect(2) = 3e-15
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 158 LMKHYHGLLY*YEKSTFSSFRGPYL 84
           L KHY  LL+ YE+    + RGP L
Sbjct: 113 LRKHYLNLLFHYEQVHLFTARGPLL 137