BLASTX nr result

ID: Bupleurum21_contig00021152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021152
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165617.1| PREDICTED: ninja-family protein AFP1-like [C...   110   2e-22
ref|XP_004135434.1| PREDICTED: ninja-family protein AFP1-like [C...   110   2e-22
emb|CBI27295.3| unnamed protein product [Vitis vinifera]              107   2e-21
ref|XP_002274025.1| PREDICTED: ninja-family protein AFP1 [Vitis ...   107   2e-21
ref|XP_002512070.1| RNA binding protein, putative [Ricinus commu...   100   2e-19

>ref|XP_004165617.1| PREDICTED: ninja-family protein AFP1-like [Cucumis sativus]
          Length = 396

 Score =  110 bits (276), Expect = 2e-22
 Identities = 80/226 (35%), Positives = 125/226 (55%), Gaps = 22/226 (9%)
 Frame = -3

Query: 612 SSLPVETEEDWRKRKEMQSIRRMEAKRRRSEKEKQRVSRGDG------GEEERKEIDVSL 451
           SSLP ETEE+WRKRKE+Q++RRMEAKRRR EK++ +   G G       EEER+EI+   
Sbjct: 109 SSLPPETEEEWRKRKELQTLRRMEAKRRRFEKQRNKDGIGMGMGTSGCFEEERREIEGLT 168

Query: 450 XXXXXXXXXQYVAAMSKVGSSVAPPFGLPSWASSAAKQSILGGGIDALSARRRGQSVGIG 271
                          S + ++VAPPFGLP+WA +AA+Q++ GG +D +   + G + G G
Sbjct: 169 GLNLREKRHG-----SCISTTVAPPFGLPTWA-AAARQALTGGIVDEIGKGKGGCTSGGG 222

Query: 270 ----------------KESTDTQGGCSSTVLESESSKALQGNTSGGDISPASNQSSRSNQ 139
                           + S ++QGG SS + E + SK +QG++S G+   +S +  R N 
Sbjct: 223 GGTNGGGFQGVGQPASQCSAESQGGSSSGMSELD-SKQIQGSSSYGEARSSSQE--RGNL 279

Query: 138 VLLGSSGTKEEDSSAGRPPRAQLPSPNKRSNVSSSGRKDSAINSME 1
              GSSG+K  D+ +    + +  + +K+ +   +  +++   SME
Sbjct: 280 EAAGSSGSKMCDNPSA-SYKTETKNQSKKPDSGENKGREAGTMSME 324


>ref|XP_004135434.1| PREDICTED: ninja-family protein AFP1-like [Cucumis sativus]
          Length = 396

 Score =  110 bits (275), Expect = 2e-22
 Identities = 82/227 (36%), Positives = 126/227 (55%), Gaps = 23/227 (10%)
 Frame = -3

Query: 612 SSLPVETEEDWRKRKEMQSIRRMEAKRRRSEKEKQRVSRGDG------GEEERKEIDVSL 451
           SSLP ETEE+WRKRKE+Q++RRMEAKRRR EK++ +   G G       EEER+EI+   
Sbjct: 109 SSLPPETEEEWRKRKELQTLRRMEAKRRRFEKQRNKDGIGMGMGTSGCFEEERREIEGLT 168

Query: 450 XXXXXXXXXQYVAAMSKVGSSVAPPFGLPSWASSAAKQSILGGGIDALSARRRGQSVGIG 271
                          S + ++VAPPFGLP+WA +AA+Q++ GG +D +   + G + G G
Sbjct: 169 GLNLREKRHG-----SCISTTVAPPFGLPTWA-AAARQALTGGIVDEIGKGKGGCTSGGG 222

Query: 270 ----------------KESTDTQGGCSSTVLESESSKALQGNTSGGDISPASNQSSRSNQ 139
                           + S ++QGG SS + E + SK +QG++S G+   +S +  R N 
Sbjct: 223 GGTNGGGFQGVGQPASQCSAESQGGSSSGMSELD-SKQIQGSSSYGEARSSSQE--RGNL 279

Query: 138 VLLGSSGTKE-EDSSAGRPPRAQLPSPNKRSNVSSSGRKDSAINSME 1
              GSSG+K  E+ SA    + +  + +K+ +   +  +++   SME
Sbjct: 280 EAAGSSGSKMCENPSASY--KTETKNQSKKPDSGENKGREAGTMSME 324


>emb|CBI27295.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  107 bits (266), Expect = 2e-21
 Identities = 80/208 (38%), Positives = 118/208 (56%), Gaps = 5/208 (2%)
 Frame = -3

Query: 612 SSLPVETEEDWRKRKEMQSIRRMEAKRRRSEKEKQRVSRGDGGEEERKEIDVSL--XXXX 439
           SSLP ET+E+WRKRKE+Q++RRMEAKRRRSEK++   ++    E+E++++D  +      
Sbjct: 89  SSLPTETQEEWRKRKELQTLRRMEAKRRRSEKQR---NKEGCVEDEKRDLDSPIVGFRSN 145

Query: 438 XXXXXQYVAAMSKVGSSVAPPFGLPSWASSAAKQSILGGGIDALSARRRGQSVGIGKEST 259
                 YVAA     +  A  FG P+WA++AA     G G      ++  Q  G      
Sbjct: 146 IEKAHHYVAA-----NRSAAAFGFPTWAAAAAAAKGKGSGSLQNFVQQTSQGSG------ 194

Query: 258 DTQGGCSSTVLESESSKALQGNTSGGDI-SPASNQS--SRSNQVLLGSSGTKEEDSSAGR 88
           ++QGG SS++ E E SK LQG +S G+  S A NQS   +S Q   GSS TK  + + GR
Sbjct: 195 ESQGGSSSSMSELE-SKPLQGYSSCGEARSLACNQSLQEQSIQEASGSSRTKPNEGT-GR 252

Query: 87  PPRAQLPSPNKRSNVSSSGRKDSAINSM 4
              A++ +P+K   +S +  + S +N M
Sbjct: 253 TSGAEMENPSKNPGLSENRGRGSGMNFM 280


>ref|XP_002274025.1| PREDICTED: ninja-family protein AFP1 [Vitis vinifera]
          Length = 360

 Score =  107 bits (266), Expect = 2e-21
 Identities = 80/208 (38%), Positives = 118/208 (56%), Gaps = 5/208 (2%)
 Frame = -3

Query: 612 SSLPVETEEDWRKRKEMQSIRRMEAKRRRSEKEKQRVSRGDGGEEERKEIDVSL--XXXX 439
           SSLP ET+E+WRKRKE+Q++RRMEAKRRRSEK++   ++    E+E++++D  +      
Sbjct: 96  SSLPTETQEEWRKRKELQTLRRMEAKRRRSEKQR---NKEGCVEDEKRDLDSPIVGFRSN 152

Query: 438 XXXXXQYVAAMSKVGSSVAPPFGLPSWASSAAKQSILGGGIDALSARRRGQSVGIGKEST 259
                 YVAA     +  A  FG P+WA++AA     G G      ++  Q  G      
Sbjct: 153 IEKAHHYVAA-----NRSAAAFGFPTWAAAAAAAKGKGSGSLQNFVQQTSQGSG------ 201

Query: 258 DTQGGCSSTVLESESSKALQGNTSGGDI-SPASNQS--SRSNQVLLGSSGTKEEDSSAGR 88
           ++QGG SS++ E E SK LQG +S G+  S A NQS   +S Q   GSS TK  + + GR
Sbjct: 202 ESQGGSSSSMSELE-SKPLQGYSSCGEARSLACNQSLQEQSIQEASGSSRTKPNEGT-GR 259

Query: 87  PPRAQLPSPNKRSNVSSSGRKDSAINSM 4
              A++ +P+K   +S +  + S +N M
Sbjct: 260 TSGAEMENPSKNPGLSENRGRGSGMNFM 287


>ref|XP_002512070.1| RNA binding protein, putative [Ricinus communis]
           gi|223549250|gb|EEF50739.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 355

 Score =  100 bits (249), Expect = 2e-19
 Identities = 79/209 (37%), Positives = 117/209 (55%), Gaps = 5/209 (2%)
 Frame = -3

Query: 612 SSLPVETEEDWRKRKEMQSIRRMEAKRRRSEKEKQ-RVSRGD-GGEEERKEIDVSLXXXX 439
           SSLP ETEE+WRKRKEMQ++RRMEAKRRRSEK+K   ++RG+   E+ERK ++ +     
Sbjct: 112 SSLPTETEEEWRKRKEMQTLRRMEAKRRRSEKQKNLNLNRGELSLEDERKGLNANR---- 167

Query: 438 XXXXXQYVAAMSKVGSSVAPPFGLPSWASSAAKQSILGGGIDALSARRRGQSVGIGKEST 259
                         G+ VA     P+W+ +  + + L G I        GQ  G  + S 
Sbjct: 168 --------------GNWVA-----PTWSRNVNRGNTLQGLI--------GQQQG-SQGSV 199

Query: 258 DTQGGCSSTVLESESSKALQGNTSGGDI-SPASNQS--SRSNQVLLGSSGTKEEDSSAGR 88
           ++QGG SS + E E SK +QG +SGG+  SPASNQS   R NQ  +GSS +K  ++    
Sbjct: 200 ESQGGSSSGISEME-SKPVQGTSSGGEARSPASNQSLQDRINQEAVGSSRSKTNENI--- 255

Query: 87  PPRAQLPSPNKRSNVSSSGRKDSAINSME 1
              + + +P+++   +    ++  +N ME
Sbjct: 256 NRTSSMENPSRKLESAEIRGREIGMNPME 284


Top