BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021146
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|2...   405   e-111
ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putativ...   402   e-110
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   401   e-110
emb|CBI26203.3| unnamed protein product [Vitis vinifera]              401   e-110
gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i...   389   e-106

>ref|XP_002315792.1| predicted protein [Populus trichocarpa] gi|222864832|gb|EEF01963.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  405 bits (1042), Expect = e-111
 Identities = 199/246 (80%), Positives = 219/246 (89%), Gaps = 1/246 (0%)
 Frame = -2

Query: 740 VLVIDEVDFMFNSSKEISSVRKLLNLYST-NSRQTIFASASLPQHNRFLHDCIQQKWTKA 564
           VLVIDEVDFMFNSSK++SS+RKLL  YS+ NSRQT+FASAS+PQHNRFL+DCIQQKWTK 
Sbjct: 65  VLVIDEVDFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHNRFLYDCIQQKWTKR 124

Query: 563 DVVHVHVNPINPMPACLHHRFVTCNKNERHTTLLSQLRSDAPQSAIIFVGEQSEKSKKAG 384
           DVVHVHVNPI PMP CL HRFV C+K +RH TLLS L+SDAP+S IIFVGEQSEKSKKAG
Sbjct: 125 DVVHVHVNPIEPMPTCLQHRFVICSKKQRHQTLLSLLQSDAPKSGIIFVGEQSEKSKKAG 184

Query: 383 NSPPTTILVDLLKSSYAGCSEIILLDEDVNFNLRAVSLSEMRQGGGYLLVATDIAARGVD 204
           N PPT  LVD LK+SY  CSEI+LL+ED+NFN RA SLSE+RQGGGYLLVATDIAARGVD
Sbjct: 185 NGPPTIDLVDFLKTSYGDCSEILLLEEDMNFNSRAASLSEVRQGGGYLLVATDIAARGVD 244

Query: 203 LPETTHIYNFDLPKDAVSYLHRAGRTGRKPFSDQKCIVTSILTSEERFVLQRYENELMFQ 24
           LPE THIYNF+LP+ AV YLHRAGRTGRKPFSD+KC VTSI+  EERFVLQRYENELMF 
Sbjct: 245 LPEITHIYNFNLPRTAVDYLHRAGRTGRKPFSDEKCNVTSIIMPEERFVLQRYENELMFN 304

Query: 23  CEELFL 6
           CEELFL
Sbjct: 305 CEELFL 310


>ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223543830|gb|EEF45358.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 476

 Score =  402 bits (1033), Expect = e-110
 Identities = 190/246 (77%), Positives = 223/246 (90%), Gaps = 1/246 (0%)
 Frame = -2

Query: 740 VLVIDEVDFMFNSSKEISSVRKLLNLYST-NSRQTIFASASLPQHNRFLHDCIQQKWTKA 564
           VLVIDEVDFMFNSSK++SS+RKLL  YS+ NSRQT+FASAS+PQH RFL+DCIQQKWTK+
Sbjct: 231 VLVIDEVDFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHRRFLYDCIQQKWTKS 290

Query: 563 DVVHVHVNPINPMPACLHHRFVTCNKNERHTTLLSQLRSDAPQSAIIFVGEQSEKSKKAG 384
           D VHVH+NP+ PMP+CL HRFV C+KN+RH  LLS L+ DAP+S I+FVGEQSEKSKKAG
Sbjct: 291 DAVHVHINPVQPMPSCLQHRFVICSKNQRHQILLSLLQCDAPKSGIVFVGEQSEKSKKAG 350

Query: 383 NSPPTTILVDLLKSSYAGCSEIILLDEDVNFNLRAVSLSEMRQGGGYLLVATDIAARGVD 204
           ++PPTT+LVD L++SY+ CS+I+LL+ED+NFNLRA SLSE++QGGGYLLVATDIAARGVD
Sbjct: 351 HAPPTTLLVDFLETSYSDCSDILLLEEDMNFNLRAASLSEVKQGGGYLLVATDIAARGVD 410

Query: 203 LPETTHIYNFDLPKDAVSYLHRAGRTGRKPFSDQKCIVTSILTSEERFVLQRYENELMFQ 24
           LPETTHIYNF+LP+ AV YLHRAGRTGRKPFSD+KC  T+I+T EERFVLQRYENELMF 
Sbjct: 411 LPETTHIYNFELPRTAVDYLHRAGRTGRKPFSDEKCYATNIITPEERFVLQRYENELMFN 470

Query: 23  CEELFL 6
           CEEL L
Sbjct: 471 CEELIL 476


>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Vitis vinifera]
          Length = 482

 Score =  401 bits (1030), Expect = e-110
 Identities = 193/246 (78%), Positives = 217/246 (88%), Gaps = 1/246 (0%)
 Frame = -2

Query: 740 VLVIDEVDFMFNSSKEISSVRKLLNLYS-TNSRQTIFASASLPQHNRFLHDCIQQKWTKA 564
           VLVIDEVDFMFN+SK++ S+RKLL  YS TN+RQT+FASAS+PQH RFLHDCIQQKWTK+
Sbjct: 233 VLVIDEVDFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFLHDCIQQKWTKS 292

Query: 563 DVVHVHVNPINPMPACLHHRFVTCNKNERHTTLLSQLRSDAPQSAIIFVGEQSEKSKKAG 384
           DVVHVHVNPI PMP+ LHHRFV CNK ER  TLLS L SDAP+  IIFVGEQSEKSKKAG
Sbjct: 293 DVVHVHVNPIEPMPSSLHHRFVICNKYERRQTLLSLLHSDAPECGIIFVGEQSEKSKKAG 352

Query: 383 NSPPTTILVDLLKSSYAGCSEIILLDEDVNFNLRAVSLSEMRQGGGYLLVATDIAARGVD 204
           N+P  T+L+D LK+SY GC +I+LL+ED+NFNLRA SLSE+RQ GGYLL++TDIAARGVD
Sbjct: 353 NAPSATLLIDFLKTSYGGCPDILLLEEDMNFNLRAASLSEVRQRGGYLLISTDIAARGVD 412

Query: 203 LPETTHIYNFDLPKDAVSYLHRAGRTGRKPFSDQKCIVTSILTSEERFVLQRYENELMFQ 24
           LPETTHIYNFDLP+  V YLHRAGR  RKPFSDQKC VT+I+TSEERFVLQRYENELMF 
Sbjct: 413 LPETTHIYNFDLPRTVVDYLHRAGRAARKPFSDQKCCVTNIITSEERFVLQRYENELMFH 472

Query: 23  CEELFL 6
           CEELFL
Sbjct: 473 CEELFL 478


>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  401 bits (1030), Expect = e-110
 Identities = 193/246 (78%), Positives = 217/246 (88%), Gaps = 1/246 (0%)
 Frame = -2

Query: 740 VLVIDEVDFMFNSSKEISSVRKLLNLYS-TNSRQTIFASASLPQHNRFLHDCIQQKWTKA 564
           VLVIDEVDFMFN+SK++ S+RKLL  YS TN+RQT+FASAS+PQH RFLHDCIQQKWTK+
Sbjct: 237 VLVIDEVDFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFLHDCIQQKWTKS 296

Query: 563 DVVHVHVNPINPMPACLHHRFVTCNKNERHTTLLSQLRSDAPQSAIIFVGEQSEKSKKAG 384
           DVVHVHVNPI PMP+ LHHRFV CNK ER  TLLS L SDAP+  IIFVGEQSEKSKKAG
Sbjct: 297 DVVHVHVNPIEPMPSSLHHRFVICNKYERRQTLLSLLHSDAPECGIIFVGEQSEKSKKAG 356

Query: 383 NSPPTTILVDLLKSSYAGCSEIILLDEDVNFNLRAVSLSEMRQGGGYLLVATDIAARGVD 204
           N+P  T+L+D LK+SY GC +I+LL+ED+NFNLRA SLSE+RQ GGYLL++TDIAARGVD
Sbjct: 357 NAPSATLLIDFLKTSYGGCPDILLLEEDMNFNLRAASLSEVRQRGGYLLISTDIAARGVD 416

Query: 203 LPETTHIYNFDLPKDAVSYLHRAGRTGRKPFSDQKCIVTSILTSEERFVLQRYENELMFQ 24
           LPETTHIYNFDLP+  V YLHRAGR  RKPFSDQKC VT+I+TSEERFVLQRYENELMF 
Sbjct: 417 LPETTHIYNFDLPRTVVDYLHRAGRAARKPFSDQKCCVTNIITSEERFVLQRYENELMFH 476

Query: 23  CEELFL 6
           CEELFL
Sbjct: 477 CEELFL 482


>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
           gi|11385590|gb|AAG34876.1|AF261021_1 putative
           chloroplast RNA helicase VDL isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score =  389 bits (999), Expect = e-106
 Identities = 189/245 (77%), Positives = 217/245 (88%), Gaps = 1/245 (0%)
 Frame = -2

Query: 740 VLVIDEVDFMFNSSKEISSVRKLLNLYSTN-SRQTIFASASLPQHNRFLHDCIQQKWTKA 564
           VLV+DEVDFMFNSSKEISS+++LL  YST+ +RQTIFASAS+PQH RFL+DC+QQKWTKA
Sbjct: 221 VLVVDEVDFMFNSSKEISSLKRLLTSYSTSKNRQTIFASASIPQHRRFLYDCVQQKWTKA 280

Query: 563 DVVHVHVNPINPMPACLHHRFVTCNKNERHTTLLSQLRSDAPQSAIIFVGEQSEKSKKAG 384
           DVVHVHVN + PMP+CLHHRFV C K E++  LLS L+ D+P+SAIIFV EQSEKSKKAG
Sbjct: 281 DVVHVHVNSVEPMPSCLHHRFVVCTKREKNQVLLSLLQVDSPESAIIFVSEQSEKSKKAG 340

Query: 383 NSPPTTILVDLLKSSYAGCSEIILLDEDVNFNLRAVSLSEMRQGGGYLLVATDIAARGVD 204
           N+PP T+LVD L SS  G S + LL+ED+NFN RA SLSE+R GGGYLLVATDIAARGVD
Sbjct: 341 NAPPITLLVDFLMSSSGGFSNVSLLEEDMNFNKRAASLSELRGGGGYLLVATDIAARGVD 400

Query: 203 LPETTHIYNFDLPKDAVSYLHRAGRTGRKPFSDQKCIVTSILTSEERFVLQRYENELMFQ 24
           LPETTHIYNFD+PKDAV+YLHRAGRTGRKPFSD+KC VTSI+T EERFVLQR+ENELMF 
Sbjct: 401 LPETTHIYNFDIPKDAVNYLHRAGRTGRKPFSDKKCFVTSIITVEERFVLQRFENELMFC 460

Query: 23  CEELF 9
           CE+LF
Sbjct: 461 CEQLF 465