BLASTX nr result

ID: Bupleurum21_contig00021145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021145
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145972.1| PREDICTED: SKP1-like protein 21-like [Cucumi...    57   1e-06
ref|XP_003597671.1| SKP1-like protein [Medicago truncatula] gi|3...    57   1e-06
emb|CBI22695.3| unnamed protein product [Vitis vinifera]               57   1e-06
ref|XP_002269721.1| PREDICTED: SKP1-like protein 21-like [Vitis ...    57   1e-06
ref|XP_002513681.1| ubiquitin-protein ligase, putative [Ricinus ...    57   1e-06

>ref|XP_004145972.1| PREDICTED: SKP1-like protein 21-like [Cucumis sativus]
           gi|449524038|ref|XP_004169030.1| PREDICTED: SKP1-like
           protein 21-like [Cucumis sativus]
          Length = 425

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = -2

Query: 162 KSYVWLQTDDGNIEKVEEEVARLSPRLCAE-KRSGFGNTKENPICVPTEVNSASL 1
           KSY+WLQT DG+I++VEEEVA   P +C E  ++G G++K   I +P  VN A L
Sbjct: 14  KSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAIL 68


>ref|XP_003597671.1| SKP1-like protein [Medicago truncatula] gi|355486719|gb|AES67922.1|
           SKP1-like protein [Medicago truncatula]
          Length = 746

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 22/54 (40%), Positives = 38/54 (70%)
 Frame = -2

Query: 171 KIEKSYVWLQTDDGNIEKVEEEVARLSPRLCAEKRSGFGNTKENPICVPTEVNS 10
           ++ K YVWLQT DG+ ++VE+++A   P +C E + G G++K   +C+P +V+S
Sbjct: 441 EMTKPYVWLQTSDGSTQQVEQDIAMFCPFICEELQKGMGSSKNCAVCLPQQVSS 494


>emb|CBI22695.3| unnamed protein product [Vitis vinifera]
          Length = 358

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = -2

Query: 162 KSYVWLQTDDGNIEKVEEEVARLSPRLCAE-KRSGFGNTKENPICVPTEVNSASL 1
           KSY+WLQT DG+I++VEEEVA   P +C E  ++G G++K   I +P  VN A L
Sbjct: 14  KSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAIL 68


>ref|XP_002269721.1| PREDICTED: SKP1-like protein 21-like [Vitis vinifera]
          Length = 359

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = -2

Query: 162 KSYVWLQTDDGNIEKVEEEVARLSPRLCAE-KRSGFGNTKENPICVPTEVNSASL 1
           KSY+WLQT DG+I++VEEEVA   P +C E  ++G G++K   I +P  VN A L
Sbjct: 14  KSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAIL 68


>ref|XP_002513681.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547589|gb|EEF49084.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 378

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = -2

Query: 162 KSYVWLQTDDGNIEKVEEEVARLSPRLCAE-KRSGFGNTKENPICVPTEVNSASL 1
           KSY+WLQT DG+I++VEEEVA   P +C E  ++G G++K   I +P  VN A L
Sbjct: 2   KSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAIL 56


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