BLASTX nr result

ID: Bupleurum21_contig00021143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021143
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308499.1| predicted protein [Populus trichocarpa] gi|2...   307   1e-81
ref|XP_002514972.1| Signal recognition particle subunit srp72, p...   301   1e-79
emb|CBI27541.3| unnamed protein product [Vitis vinifera]              295   5e-78
ref|XP_002271378.1| PREDICTED: signal recognition particle 72 kD...   295   5e-78
ref|XP_004135297.1| PREDICTED: signal recognition particle 72 kD...   293   2e-77

>ref|XP_002308499.1| predicted protein [Populus trichocarpa] gi|222854475|gb|EEE92022.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  307 bits (787), Expect = 1e-81
 Identities = 157/211 (74%), Positives = 181/211 (85%), Gaps = 5/211 (2%)
 Frame = -2

Query: 619 DLFTSINRHVQRSEFEQVVKVADQVLSVAPADEDAIRCKVVALIKCDKIDDALEVIQKAS 440
           DLF+++NRH++RSEFEQ VKVADQVLSVAP DEDAIRCKVVALIKCD ID AL  I  A 
Sbjct: 21  DLFSNLNRHIERSEFEQAVKVADQVLSVAPNDEDAIRCKVVALIKCDSIDKALSTIHSAR 80

Query: 439 H-----DISFCKAYCLYRQNKLNEAMESLKGLDENSATMLLESQILFRMGKMDASVDIYR 275
                 D S+ KAYCLYRQNKL+EA+ESLKGL+  S TMLLESQILFR+GKMDA VD+Y+
Sbjct: 81  RQNLPFDFSYFKAYCLYRQNKLDEALESLKGLERTSETMLLESQILFRLGKMDACVDVYQ 140

Query: 274 KLQNSKIDLLEINVVAGLVSAGRISEVKGMMEALRVKATSSFELAYNAACSLIEEHKYTD 95
           KLQ SKID LEIN+VAGL+ AG+ S+V+GMMEA R+KA+SSFELAYN ACSLIE +KYTD
Sbjct: 141 KLQKSKIDTLEINLVAGLILAGKSSQVQGMMEANRIKASSSFELAYNTACSLIERNKYTD 200

Query: 94  AEQLLLSARRIGQETLMDDSFADDDIEIELA 2
           AEQLLL+ARR+GQE LMDD+ A+DDIEIELA
Sbjct: 201 AEQLLLTARRVGQEALMDDNLAEDDIEIELA 231


>ref|XP_002514972.1| Signal recognition particle subunit srp72, putative [Ricinus
           communis] gi|223546023|gb|EEF47526.1| Signal recognition
           particle subunit srp72, putative [Ricinus communis]
          Length = 664

 Score =  301 bits (770), Expect = 1e-79
 Identities = 152/209 (72%), Positives = 178/209 (85%), Gaps = 3/209 (1%)
 Frame = -2

Query: 619 DLFTSINRHVQRSEFEQVVKVADQVLSVAPADEDAIRCKVVALIKCDKIDDALEVIQKAS 440
           DLFT++N+H+QRS++EQ VKVADQVL+VAP DEDAIRCKVV +IK D IDDAL  I  A 
Sbjct: 24  DLFTTLNKHIQRSDYEQAVKVADQVLAVAPGDEDAIRCKVVGMIKADNIDDALSTIHSAQ 83

Query: 439 H---DISFCKAYCLYRQNKLNEAMESLKGLDENSATMLLESQILFRMGKMDASVDIYRKL 269
               D SF KAYCLYRQNKL EA+E+L+G + NS T+LLESQIL+R+GKMDA VD+Y+KL
Sbjct: 84  RLTVDFSFFKAYCLYRQNKLEEALETLRGQERNSETLLLESQILYRLGKMDACVDVYQKL 143

Query: 268 QNSKIDLLEINVVAGLVSAGRISEVKGMMEALRVKATSSFELAYNAACSLIEEHKYTDAE 89
           Q SKID LEIN VA L+ AGR SEV+GMMEA R+KA+SSFELAYN ACSLI+ +KYTDAE
Sbjct: 144 QKSKIDSLEINFVASLILAGRASEVQGMMEANRIKASSSFELAYNTACSLIQRNKYTDAE 203

Query: 88  QLLLSARRIGQETLMDDSFADDDIEIELA 2
           QLLL+ARRIGQETLMDD+ A+DDIEIELA
Sbjct: 204 QLLLTARRIGQETLMDDNLAEDDIEIELA 232


>emb|CBI27541.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  295 bits (756), Expect = 5e-78
 Identities = 152/209 (72%), Positives = 181/209 (86%), Gaps = 3/209 (1%)
 Frame = -2

Query: 619 DLFTSINRHVQRSEFEQVVKVADQVLSVAPADEDAIRCKVVALIKCDKIDDALEVIQKAS 440
           DLFTS+N H+QRS+F+Q VKVADQ+L VAP+DEDAIRCKVVALIK D+I+DAL  IQ + 
Sbjct: 23  DLFTSLNLHIQRSQFDQAVKVADQILLVAPSDEDAIRCKVVALIKEDRINDALSTIQASQ 82

Query: 439 H---DISFCKAYCLYRQNKLNEAMESLKGLDENSATMLLESQILFRMGKMDASVDIYRKL 269
               D+SF KAYCLYRQNKL+E++ESLK  + +S  MLLESQIL+R+GKMDA +DIY+KL
Sbjct: 83  RLPIDLSFFKAYCLYRQNKLDESLESLKSQEGSSTAMLLESQILYRLGKMDACIDIYQKL 142

Query: 268 QNSKIDLLEINVVAGLVSAGRISEVKGMMEALRVKATSSFELAYNAACSLIEEHKYTDAE 89
           Q SKI+ LEIN+VAGLVSAGR S+V+G ++ALRVKATSSFELAYN ACSLIE  KY DAE
Sbjct: 143 QKSKIESLEINLVAGLVSAGRGSDVQGTLDALRVKATSSFELAYNTACSLIERSKYKDAE 202

Query: 88  QLLLSARRIGQETLMDDSFADDDIEIELA 2
           QLLLSARR+GQETLM+D+ ADD+IEIELA
Sbjct: 203 QLLLSARRVGQETLMEDNLADDEIEIELA 231


>ref|XP_002271378.1| PREDICTED: signal recognition particle 72 kDa protein [Vitis
           vinifera]
          Length = 673

 Score =  295 bits (756), Expect = 5e-78
 Identities = 152/209 (72%), Positives = 181/209 (86%), Gaps = 3/209 (1%)
 Frame = -2

Query: 619 DLFTSINRHVQRSEFEQVVKVADQVLSVAPADEDAIRCKVVALIKCDKIDDALEVIQKAS 440
           DLFTS+N H+QRS+F+Q VKVADQ+L VAP+DEDAIRCKVVALIK D+I+DAL  IQ + 
Sbjct: 23  DLFTSLNLHIQRSQFDQAVKVADQILLVAPSDEDAIRCKVVALIKEDRINDALSTIQASQ 82

Query: 439 H---DISFCKAYCLYRQNKLNEAMESLKGLDENSATMLLESQILFRMGKMDASVDIYRKL 269
               D+SF KAYCLYRQNKL+E++ESLK  + +S  MLLESQIL+R+GKMDA +DIY+KL
Sbjct: 83  RLPIDLSFFKAYCLYRQNKLDESLESLKSQEGSSTAMLLESQILYRLGKMDACIDIYQKL 142

Query: 268 QNSKIDLLEINVVAGLVSAGRISEVKGMMEALRVKATSSFELAYNAACSLIEEHKYTDAE 89
           Q SKI+ LEIN+VAGLVSAGR S+V+G ++ALRVKATSSFELAYN ACSLIE  KY DAE
Sbjct: 143 QKSKIESLEINLVAGLVSAGRGSDVQGTLDALRVKATSSFELAYNTACSLIERSKYKDAE 202

Query: 88  QLLLSARRIGQETLMDDSFADDDIEIELA 2
           QLLLSARR+GQETLM+D+ ADD+IEIELA
Sbjct: 203 QLLLSARRVGQETLMEDNLADDEIEIELA 231


>ref|XP_004135297.1| PREDICTED: signal recognition particle 72 kDa protein-like [Cucumis
           sativus] gi|449530207|ref|XP_004172087.1| PREDICTED:
           signal recognition particle 72 kDa protein-like [Cucumis
           sativus]
          Length = 667

 Score =  293 bits (751), Expect = 2e-77
 Identities = 152/207 (73%), Positives = 175/207 (84%), Gaps = 1/207 (0%)
 Frame = -2

Query: 619 DLFTSINRHVQRSEFEQVVKVADQVLSVAPADEDAIRCKVVALIKCDKIDDALEVIQKA- 443
           D FTS+NRH+QRSEF Q VKVADQ+LSVAP DEDA+RCK+VALIK DKID+AL  IQ + 
Sbjct: 23  DQFTSLNRHIQRSEFSQAVKVADQILSVAPGDEDALRCKIVALIKDDKIDNALSAIQSSK 82

Query: 442 SHDISFCKAYCLYRQNKLNEAMESLKGLDENSATMLLESQILFRMGKMDASVDIYRKLQN 263
           + D SF KAYCLYRQNKL+EA+ SL+  + NS TMLLESQIL+R+GKMDA VD Y+KL  
Sbjct: 83  TADFSFFKAYCLYRQNKLDEALSSLRDQERNSMTMLLESQILYRLGKMDACVDTYQKLAK 142

Query: 262 SKIDLLEINVVAGLVSAGRISEVKGMMEALRVKATSSFELAYNAACSLIEEHKYTDAEQL 83
           SKID LEIN VA L  AGR SEV+G MEALRVKATSSFELAYN ACSL++ +KYTDAEQL
Sbjct: 143 SKIDSLEINYVAALTVAGRASEVQGAMEALRVKATSSFELAYNTACSLVDVNKYTDAEQL 202

Query: 82  LLSARRIGQETLMDDSFADDDIEIELA 2
           LLSARRIGQETLM+++  D+DIEIELA
Sbjct: 203 LLSARRIGQETLMEENLPDEDIEIELA 229


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