BLASTX nr result

ID: Bupleurum21_contig00021138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021138
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269481.2| PREDICTED: leucine-rich repeat receptor prot...   238   4e-61
emb|CAN80441.1| hypothetical protein VITISV_007245 [Vitis vinifera]   238   4e-61
ref|XP_003632603.1| PREDICTED: receptor-like protein 12-like [Vi...   236   2e-60
gb|ACJ61469.1| GbVe [Gossypium barbadense]                            234   5e-60
ref|XP_002270356.2| PREDICTED: LRR receptor-like serine/threonin...   232   4e-59

>ref|XP_002269481.2| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like
            [Vitis vinifera]
          Length = 1054

 Score =  238 bits (608), Expect = 4e-61
 Identities = 114/187 (60%), Positives = 142/187 (75%)
 Frame = +1

Query: 1    LYKCTKLEVLNLGNNQISDSFPCFLKNSSNLRVLVLRLNQFHGEIHCPRPRSHWPKLQII 180
            L  C  LEVLNLGNN+++D FPC+LKN S+LRVLVLR N+FHG I CP   S WP LQI+
Sbjct: 725  LANCKALEVLNLGNNRMNDIFPCWLKNISSLRVLVLRANKFHGPIGCPNSNSTWPMLQIV 784

Query: 181  DIASNNFTGKVPENCFLDWTAMMEDKDAAVLEDNHLRYKVLKLNNFYYQDSVTVTSKGVE 360
            D+A NNF+G +PE CF +W AMM  +D    + NHLR+KVL  +  YYQD+VTVTSKG E
Sbjct: 785  DLAWNNFSGVLPEKCFSNWRAMMAGEDDVQSKSNHLRFKVLAFSQLYYQDAVTVTSKGQE 844

Query: 361  VKLVKILTIFNSIDISGNQFEGNIPETMGKLKRLYLLNISHNAFRGSIPSSIGNLEQLEA 540
            ++LVK+LT+F SID S N F+G+IPE +G LK LY+LN+S N F G IPSS+G L QLE+
Sbjct: 845  MELVKVLTLFTSIDFSCNNFQGDIPEDIGDLKLLYVLNLSGNGFTGQIPSSLGQLRQLES 904

Query: 541  LDFSMNK 561
            LD S+NK
Sbjct: 905  LDLSLNK 911



 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 1/179 (0%)
 Frame = +1

Query: 28   LNLGNNQISDSFPCFLKNSSNLRVLV-LRLNQFHGEIHCPRPRSHWPKLQIIDIASNNFT 204
            ++  NN+ + S P  +    N+ V   L  N   G I      +H+  LQ++D + N+ +
Sbjct: 613  VDYSNNRFTSSIPDDIGTYMNVTVFFSLSKNNITGIIPASICNAHY--LQVLDFSDNSLS 670

Query: 205  GKVPENCFLDWTAMMEDKDAAVLEDNHLRYKVLKLNNFYYQDSVTVTSKGVEVKLVKILT 384
            GK+P       + ++E+ D AVL         L+ N F          KG          
Sbjct: 671  GKIP-------SCLIENGDLAVLN--------LRRNKF----------KGTIPGEFPGHC 705

Query: 385  IFNSIDISGNQFEGNIPETMGKLKRLYLLNISHNAFRGSIPSSIGNLEQLEALDFSMNK 561
            +  ++D++GN  EG IPE++   K L +LN+ +N      P  + N+  L  L    NK
Sbjct: 706  LLQTLDLNGNLLEGKIPESLANCKALEVLNLGNNRMNDIFPCWLKNISSLRVLVLRANK 764


>emb|CAN80441.1| hypothetical protein VITISV_007245 [Vitis vinifera]
          Length = 874

 Score =  238 bits (608), Expect = 4e-61
 Identities = 114/187 (60%), Positives = 142/187 (75%)
 Frame = +1

Query: 1    LYKCTKLEVLNLGNNQISDSFPCFLKNSSNLRVLVLRLNQFHGEIHCPRPRSHWPKLQII 180
            L  C  LEVLNLGNN+++D FPC+LKN S+LRVLVLR N+FHG I CP   S WP LQI+
Sbjct: 558  LANCKALEVLNLGNNRMNDIFPCWLKNISSLRVLVLRANKFHGPIGCPNSNSTWPMLQIV 617

Query: 181  DIASNNFTGKVPENCFLDWTAMMEDKDAAVLEDNHLRYKVLKLNNFYYQDSVTVTSKGVE 360
            D+A NNF+G +PE CF +W AMM  +D    + NHLR+KVL  +  YYQD+VTVTSKG E
Sbjct: 618  DLAWNNFSGVLPEKCFSNWRAMMAGEDDVQSKSNHLRFKVLAFSQLYYQDAVTVTSKGQE 677

Query: 361  VKLVKILTIFNSIDISGNQFEGNIPETMGKLKRLYLLNISHNAFRGSIPSSIGNLEQLEA 540
            ++LVK+LT+F SID S N F+G+IPE +G LK LY+LN+S N F G IPSS+G L QLE+
Sbjct: 678  MELVKVLTLFTSIDFSCNNFQGDIPEDIGDLKLLYVLNLSGNGFTGQIPSSLGQLRQLES 737

Query: 541  LDFSMNK 561
            LD S+NK
Sbjct: 738  LDLSLNK 744



 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 1/179 (0%)
 Frame = +1

Query: 28  LNLGNNQISDSFPCFLKNSSNLRVLV-LRLNQFHGEIHCPRPRSHWPKLQIIDIASNNFT 204
           ++  NN+ + S P  +    N+ V   L  N   G I      +H+  LQ++D + N+ +
Sbjct: 446 VDYSNNRFTSSIPDDIGTYMNVTVFFSLSKNNITGIIPASICNAHY--LQVLDFSDNSLS 503

Query: 205 GKVPENCFLDWTAMMEDKDAAVLEDNHLRYKVLKLNNFYYQDSVTVTSKGVEVKLVKILT 384
           GK+P       + ++E+ D AVL         L+ N F          KG          
Sbjct: 504 GKIP-------SCLIENGDLAVLN--------LRRNKF----------KGTIPGEFPGHC 538

Query: 385 IFNSIDISGNQFEGNIPETMGKLKRLYLLNISHNAFRGSIPSSIGNLEQLEALDFSMNK 561
           +  ++D++GN  EG IPE++   K L +LN+ +N      P  + N+  L  L    NK
Sbjct: 539 LLQTLDLNGNLLEGKIPESLANCKALEVLNLGNNRMNDIFPCWLKNISSLRVLVLRANK 597


>ref|XP_003632603.1| PREDICTED: receptor-like protein 12-like [Vitis vinifera]
          Length = 1075

 Score =  236 bits (602), Expect = 2e-60
 Identities = 112/187 (59%), Positives = 142/187 (75%)
 Frame = +1

Query: 1    LYKCTKLEVLNLGNNQISDSFPCFLKNSSNLRVLVLRLNQFHGEIHCPRPRSHWPKLQII 180
            L  C +LE+LNLGNNQI D FPC+LKN +NLRVLVLR N+FHG I C R  S W  LQI+
Sbjct: 746  LANCKELEILNLGNNQIDDIFPCWLKNITNLRVLVLRGNKFHGPIGCLRSNSTWAMLQIV 805

Query: 181  DIASNNFTGKVPENCFLDWTAMMEDKDAAVLEDNHLRYKVLKLNNFYYQDSVTVTSKGVE 360
            D+A NNF+GK+PE CF  WTAMM  ++    +  HL+++VL+ +  YYQD+VTVTSKG+E
Sbjct: 806  DLADNNFSGKLPEKCFSTWTAMMAGENEVQSKLKHLQFRVLQFSQLYYQDAVTVTSKGLE 865

Query: 361  VKLVKILTIFNSIDISGNQFEGNIPETMGKLKRLYLLNISHNAFRGSIPSSIGNLEQLEA 540
            ++LVK+LT++ SID+S N F+G+IPE MG    LY LN+SHN F G IPSSIGNL QLE+
Sbjct: 866  MELVKVLTLYTSIDLSCNNFQGDIPEVMGNFTSLYGLNLSHNGFTGHIPSSIGNLRQLES 925

Query: 541  LDFSMNK 561
            LD S N+
Sbjct: 926  LDLSQNR 932


>gb|ACJ61469.1| GbVe [Gossypium barbadense]
          Length = 1128

 Score =  234 bits (598), Expect = 5e-60
 Identities = 114/186 (61%), Positives = 143/186 (76%)
 Frame = +1

Query: 1    LYKCTKLEVLNLGNNQISDSFPCFLKNSSNLRVLVLRLNQFHGEIHCPRPRSHWPKLQII 180
            L  C  LEVL+LGNNQI+D+FPC LKN S+LRVLVLR N+F+G +HC   RS WP LQI+
Sbjct: 735  LVSCKMLEVLDLGNNQINDTFPCHLKNISSLRVLVLRGNKFNGNVHCSE-RSPWPMLQIV 793

Query: 181  DIASNNFTGKVPENCFLDWTAMMEDKDAAVLEDNHLRYKVLKLNNFYYQDSVTVTSKGVE 360
            D++SN+F+G++ E C   W AM   +   + E NHL++KVLKLN FYYQD++TVT KG+E
Sbjct: 794  DLSSNSFSGRLHEACLSTWKAMRAAESETLSELNHLQFKVLKLNQFYYQDAITVTMKGLE 853

Query: 361  VKLVKILTIFNSIDISGNQFEGNIPETMGKLKRLYLLNISHNAFRGSIPSSIGNLEQLEA 540
            ++L+KILT+F SIDIS N FEG IPE +G  K LY+LN SHNAF GSIP S+GNL QLE+
Sbjct: 854  LELLKILTVFTSIDISRNNFEGPIPEVIGTFKALYVLNFSHNAFTGSIPPSLGNLSQLES 913

Query: 541  LDFSMN 558
            LD S N
Sbjct: 914  LDLSSN 919



 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
 Frame = +1

Query: 7   KCTKLEVLNLGNNQISD-SFPCFLKNSSNLRVLVLRLNQFHGEIHCPRPRSHWPKLQIID 183
           K   L++L+L NN++ + SF  F  N S L+ L L   +F G++  P    +  +L  I+
Sbjct: 278 KIPTLQILDLSNNELLEGSFQEFPSNGS-LQTLTLSGTKFGGQV--PDSIGNLGQLTRIE 334

Query: 184 IASNNFTGKVPENC-------FLDWTAMMEDKDAAVLEDNHLRYKVLKLNNFYYQDSVTV 342
           +AS NF+G +P+         +LD+++   +  +  +        + +LN  Y + + T+
Sbjct: 335 LASCNFSGPIPKAVKKLTQLVYLDFSS---NSFSGPIPSFSSSRNLTQLNLAYNRLNGTI 391

Query: 343 TSKGVEVKLVKILTIFNSIDISGNQFEGNIPETMGKLKRLYLLNISHNAFRGSIPSSIGN 522
            S    V     L+   SID+  N+  G IP T+  +  L  +++S N F GS+    G 
Sbjct: 392 HSTDWSV-----LSNLVSIDLRNNKLSGTIPPTLFGIPSLQKISLSQNRFNGSLGDLRGK 446

Query: 523 LE-QLEALDFSMN 558
               L+ LD S N
Sbjct: 447 TTLLLDTLDLSSN 459


>ref|XP_002270356.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            FLS2-like [Vitis vinifera]
          Length = 1057

 Score =  232 bits (591), Expect = 4e-59
 Identities = 110/183 (60%), Positives = 137/183 (74%)
 Frame = +1

Query: 10   CTKLEVLNLGNNQISDSFPCFLKNSSNLRVLVLRLNQFHGEIHCPRPRSHWPKLQIIDIA 189
            C +LEVLNLGNN+I D FPC+LKN S+LRVLVLR N+FHG I CP   S WP LQI+D+A
Sbjct: 731  CKELEVLNLGNNRIDDKFPCWLKNMSSLRVLVLRANRFHGPIGCPNSNSTWPMLQIVDLA 790

Query: 190  SNNFTGKVPENCFLDWTAMMEDKDAAVLEDNHLRYKVLKLNNFYYQDSVTVTSKGVEVKL 369
             NNF+GK+P   FL W AMM  +D    + NH+++K+L+ +  YYQD+VTVTSKG E++L
Sbjct: 791  YNNFSGKLPAKGFLTWKAMMASEDEVQSKLNHIQFKILEFSELYYQDAVTVTSKGQEMEL 850

Query: 370  VKILTIFNSIDISGNQFEGNIPETMGKLKRLYLLNISHNAFRGSIPSSIGNLEQLEALDF 549
            VK+LT+F SID S N+FEG IPE MG    LY+LN+S N F G IPSS+G L QLE+LD 
Sbjct: 851  VKVLTLFTSIDFSSNKFEGQIPEEMGNFISLYVLNLSGNGFTGQIPSSMGQLRQLESLDL 910

Query: 550  SMN 558
            S N
Sbjct: 911  SRN 913


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