BLASTX nr result
ID: Bupleurum21_contig00021133
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00021133
(825 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat... 168 2e-39
ref|XP_002532531.1| pentatricopeptide repeat-containing protein,... 167 3e-39
ref|XP_002302938.1| predicted protein [Populus trichocarpa] gi|2... 159 6e-37
ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat... 157 2e-36
ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat... 157 2e-36
>ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera] gi|296087085|emb|CBI33459.3|
unnamed protein product [Vitis vinifera]
Length = 592
Score = 168 bits (425), Expect = 2e-39
Identities = 80/104 (76%), Positives = 91/104 (87%)
Frame = +1
Query: 1 VKRGFKLLKEMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNI 180
VK GFKLLKEMQ DGHVPGVVTYNVL+NGLCKQGQMKNA+MLLDAMLNLGVVPDD+TYNI
Sbjct: 486 VKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNI 545
Query: 181 LLEGHCRHADPENSGKLRNEKGLVLDYASYKSIINDLSQKQKQR 312
LLEGHC+H + E+ KL++EKGLV DY SY S+I DL + K+R
Sbjct: 546 LLEGHCKHGNREDFDKLQSEKGLVQDYGSYTSLIGDLRKTCKER 589
Score = 71.6 bits (174), Expect = 2e-10
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Frame = +1
Query: 7 RGFKLLKEMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNILL 186
+GF+L + M + P V TY+VL+NGLCK+GQ+ +A+ L M + G+VP+DVT+ L+
Sbjct: 278 QGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337
Query: 187 EGHCRHADPENSGKLRNE---KGLVLDYASYKSIINDL 291
GHC + ++ + KG+ D +Y ++IN L
Sbjct: 338 NGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375
Score = 71.6 bits (174), Expect = 2e-10
Identities = 34/95 (35%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Frame = +1
Query: 10 GFKLLKEMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNILLE 189
G ++ ++M G P V+TYN L+NGLCK G ++ A L+ M G+ PD TY +L++
Sbjct: 349 GMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLID 408
Query: 190 GHCRHADPENSGKLRNE---KGLVLDYASYKSIIN 285
G C+ D E++ ++R E +G+ LD ++ ++I+
Sbjct: 409 GCCKEGDLESALEIRKEMVKEGIELDNVAFTALIS 443
Score = 60.1 bits (144), Expect = 6e-07
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Frame = +1
Query: 1 VKRGFKLLKEMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNI 180
++ ++ KEM +G V + L++G C++GQ+ A+ L ML G+ PDD TY +
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475
Query: 181 LLEGHCRHADPENSGKLRNE---KGLVLDYASYKSIINDLSQKQKQRS 315
++ G C+ D + KL E G V +Y ++N L ++ + ++
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKN 523
>ref|XP_002532531.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527743|gb|EEF29847.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 212
Score = 167 bits (423), Expect = 3e-39
Identities = 77/104 (74%), Positives = 93/104 (89%)
Frame = +1
Query: 1 VKRGFKLLKEMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNI 180
+K GFKLLKEMQ+DGHVPGVVTYNVLMNG CKQ QMKNA+MLLDAM+NLGVVPDD+TYNI
Sbjct: 106 MKTGFKLLKEMQSDGHVPGVVTYNVLMNGYCKQSQMKNANMLLDAMMNLGVVPDDITYNI 165
Query: 181 LLEGHCRHADPENSGKLRNEKGLVLDYASYKSIINDLSQKQKQR 312
LLEGHC+H + ++ KL++EKG+V DYASYKS++N+LS+ K R
Sbjct: 166 LLEGHCKHGNLQDFHKLQSEKGVVADYASYKSLLNELSRSSKDR 209
>ref|XP_002302938.1| predicted protein [Populus trichocarpa] gi|222844664|gb|EEE82211.1|
predicted protein [Populus trichocarpa]
Length = 599
Score = 159 bits (403), Expect = 6e-37
Identities = 73/104 (70%), Positives = 90/104 (86%)
Frame = +1
Query: 1 VKRGFKLLKEMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNI 180
VK GFKLLKEMQ+DGH+PGV+TYNVLMNGLCKQGQ+KNADMLL+AMLNLGVVPDD+TYNI
Sbjct: 493 VKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNI 552
Query: 181 LLEGHCRHADPENSGKLRNEKGLVLDYASYKSIINDLSQKQKQR 312
LL+GHC+H + ++ E GLV DYASY+S++++LS+ K R
Sbjct: 553 LLQGHCKHGKLGDFQNVKTEMGLVSDYASYRSLLHELSKASKDR 596
Score = 63.9 bits (154), Expect = 4e-08
Identities = 31/94 (32%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Frame = +1
Query: 28 EMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNILLEGHCRHA 207
E+ G+ P V T+NVLMN LCK+G++K+A ++ D + G+ P V++N L+ G+C+
Sbjct: 222 EILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSG 281
Query: 208 DPENSGKLR---NEKGLVLDYASYKSIINDLSQK 300
+ E +L+ E + D +Y ++I+ L ++
Sbjct: 282 NLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKE 315
Score = 63.9 bits (154), Expect = 4e-08
Identities = 33/100 (33%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Frame = +1
Query: 1 VKRGFKLLKEMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNI 180
++ GF+L M+ P V TY+ L++GLCK+ Q+++A+ L M + G+VP+DVT+
Sbjct: 283 LEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTT 342
Query: 181 LLEGHCRHADPENSGKLRNE---KGLVLDYASYKSIINDL 291
L+ G C++ + + ++ + KGL D Y ++I+ L
Sbjct: 343 LINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGL 382
Score = 63.2 bits (152), Expect = 7e-08
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Frame = +1
Query: 1 VKRGFKLLKEMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNI 180
V ++ ++M G +V YN L++GLCK G + A + M G++PD TY
Sbjct: 353 VDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTT 412
Query: 181 LLEGHCRHADPENSGKLRNE---KGLVLDYASYKSIINDLSQKQK 306
LL+G C+ D E + ++R E +G+ LD ++ +II+ L + K
Sbjct: 413 LLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGK 457
>ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 157 bits (398), Expect = 2e-36
Identities = 73/104 (70%), Positives = 89/104 (85%)
Frame = +1
Query: 1 VKRGFKLLKEMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNI 180
VK GFKLLKEMQ +GH PGV+TYNVLMNGLCKQGQMKNA+MLL+AMLNLGV PDD+TYNI
Sbjct: 484 VKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNI 543
Query: 181 LLEGHCRHADPENSGKLRNEKGLVLDYASYKSIINDLSQKQKQR 312
LLEGHC++ E+ KLRNEKGL++DYA Y S++++ ++ K R
Sbjct: 544 LLEGHCKNGKAEDLLKLRNEKGLIVDYAYYTSLVSEYNKSLKDR 587
Score = 74.7 bits (182), Expect = 2e-11
Identities = 36/98 (36%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Frame = +1
Query: 28 EMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNILLEGHCRHA 207
+M G P +V YN L+NGLCK G + A L+D M +G+ PD +TY L++G+C+
Sbjct: 353 QMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEG 412
Query: 208 DPENSGKLR---NEKGLVLDYASYKSIINDLSQKQKQR 312
D E++ ++R NE+G+VLD ++ ++I+ + + R
Sbjct: 413 DLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVR 450
Score = 60.5 bits (145), Expect = 5e-07
Identities = 31/97 (31%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Frame = +1
Query: 10 GFKLLKEMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNILLE 189
GF+L K M+ + P V TY+VL++GLCK+G++ A+ L D M G+ P+ +T+ L++
Sbjct: 277 GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALID 336
Query: 190 GHCRHADPENSGKLRNE---KGLVLDYASYKSIINDL 291
G R +++ ++ G+ D Y +++N L
Sbjct: 337 GQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373
Score = 58.9 bits (141), Expect = 1e-06
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Frame = +1
Query: 1 VKRGFKLLKEMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNI 180
V + KL+ EM+ G P +TY L++G CK+G +++A + M GVV D+V +
Sbjct: 379 VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 438
Query: 181 LLEGHCRHA---DPENSGKLRNEKGLVLDYASYKSIINDLSQK 300
L+ G CR D E + + E G+ D A+Y +I+ +K
Sbjct: 439 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKK 481
>ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 157 bits (398), Expect = 2e-36
Identities = 73/104 (70%), Positives = 89/104 (85%)
Frame = +1
Query: 1 VKRGFKLLKEMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNI 180
VK GFKLLKEMQ +GH PGV+TYNVLMNGLCKQGQMKNA+MLL+AMLNLGV PDD+TYNI
Sbjct: 484 VKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNI 543
Query: 181 LLEGHCRHADPENSGKLRNEKGLVLDYASYKSIINDLSQKQKQR 312
LLEGHC++ E+ KLRNEKGL++DYA Y S++++ ++ K R
Sbjct: 544 LLEGHCKNGKAEDLLKLRNEKGLIVDYAYYTSLVSEYNKSLKDR 587
Score = 74.7 bits (182), Expect = 2e-11
Identities = 36/98 (36%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Frame = +1
Query: 28 EMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNILLEGHCRHA 207
+M G P +V YN L+NGLCK G + A L+D M +G+ PD +TY L++G+C+
Sbjct: 353 QMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEG 412
Query: 208 DPENSGKLR---NEKGLVLDYASYKSIINDLSQKQKQR 312
D E++ ++R NE+G+VLD ++ ++I+ + + R
Sbjct: 413 DLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVR 450
Score = 64.3 bits (155), Expect = 3e-08
Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Frame = +1
Query: 10 GFKLLKEMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNILLE 189
GF+L K M+ + P V TY+VL++GLCK+G++ A+ L D M G+ P+ +T+ L++
Sbjct: 277 GFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALID 336
Query: 190 GHCRHADPENSGKLRNE---KGLVLDYASYKSIINDL 291
G CR +++ ++ G+ D Y +++N L
Sbjct: 337 GQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373
Score = 58.9 bits (141), Expect = 1e-06
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Frame = +1
Query: 1 VKRGFKLLKEMQADGHVPGVVTYNVLMNGLCKQGQMKNADMLLDAMLNLGVVPDDVTYNI 180
V + KL+ EM+ G P +TY L++G CK+G +++A + M GVV D+V +
Sbjct: 379 VNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 438
Query: 181 LLEGHCRHA---DPENSGKLRNEKGLVLDYASYKSIINDLSQK 300
L+ G CR D E + + E G+ D A+Y +I+ +K
Sbjct: 439 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKK 481