BLASTX nr result

ID: Bupleurum21_contig00021117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021117
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152267.1| PREDICTED: mediator of RNA polymerase II tra...   137   7e-31
ref|XP_002523099.1| conserved hypothetical protein [Ricinus comm...   137   1e-30
ref|XP_002268380.1| PREDICTED: uncharacterized protein LOC100246...   134   6e-30
ref|XP_003525092.1| PREDICTED: uncharacterized protein LOC100815...   131   5e-29
ref|XP_002321001.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29

>ref|XP_004152267.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           28-like [Cucumis sativus]
           gi|449484322|ref|XP_004156851.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 28-like [Cucumis
           sativus]
          Length = 141

 Score =  137 bits (346), Expect = 7e-31
 Identities = 72/100 (72%), Positives = 78/100 (78%)
 Frame = -1

Query: 302 SPLPGEDMIACVTXXXXXXXXXXXXXXLQAIDRSPHPSHQIDVERHARDFMEAAKKLQLY 123
           S  P EDMIA V               LQAIDRSPHPSHQ+DVERHARDFMEAAKKLQLY
Sbjct: 20  SQSPREDMIAYVMALEAALLPCLPARELQAIDRSPHPSHQVDVERHARDFMEAAKKLQLY 79

Query: 122 FIGLQREDQPTTVELLRKDIAAMEEELKTKNELIKKQERL 3
           FIGLQREDQPT VE LRK+I+A+EEELK KNE+IKKQE+L
Sbjct: 80  FIGLQREDQPTKVETLRKEISAIEEELKVKNEIIKKQEKL 119


>ref|XP_002523099.1| conserved hypothetical protein [Ricinus communis]
           gi|223537661|gb|EEF39284.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 140

 Score =  137 bits (344), Expect = 1e-30
 Identities = 71/95 (74%), Positives = 74/95 (77%)
 Frame = -1

Query: 287 EDMIACVTXXXXXXXXXXXXXXLQAIDRSPHPSHQIDVERHARDFMEAAKKLQLYFIGLQ 108
           EDMI CV               LQAIDRSPHPSHQIDVERHARDFMEAAKKLQLYFIGLQ
Sbjct: 24  EDMIECVMALEAALLPCLPARELQAIDRSPHPSHQIDVERHARDFMEAAKKLQLYFIGLQ 83

Query: 107 REDQPTTVELLRKDIAAMEEELKTKNELIKKQERL 3
           REDQPT  E LRK+IA MEEELK K+E+IKKQERL
Sbjct: 84  REDQPTAAETLRKEIAVMEEELKIKDEIIKKQERL 118


>ref|XP_002268380.1| PREDICTED: uncharacterized protein LOC100246950 [Vitis vinifera]
          Length = 139

 Score =  134 bits (338), Expect = 6e-30
 Identities = 70/99 (70%), Positives = 74/99 (74%)
 Frame = -1

Query: 299 PLPGEDMIACVTXXXXXXXXXXXXXXLQAIDRSPHPSHQIDVERHARDFMEAAKKLQLYF 120
           P P +DMIACV               LQAIDRSPHPSHQIDVERHARDFMEAAKKLQ+YF
Sbjct: 19  PPPRQDMIACVMALEAALLPCLPARELQAIDRSPHPSHQIDVERHARDFMEAAKKLQVYF 78

Query: 119 IGLQREDQPTTVELLRKDIAAMEEELKTKNELIKKQERL 3
           I LQREDQPT  E LRK+IA MEEEL+ K ELI KQERL
Sbjct: 79  ISLQREDQPTKAETLRKEIAVMEEELRLKTELINKQERL 117


>ref|XP_003525092.1| PREDICTED: uncharacterized protein LOC100815419 [Glycine max]
          Length = 141

 Score =  131 bits (330), Expect = 5e-29
 Identities = 68/100 (68%), Positives = 76/100 (76%)
 Frame = -1

Query: 302 SPLPGEDMIACVTXXXXXXXXXXXXXXLQAIDRSPHPSHQIDVERHARDFMEAAKKLQLY 123
           SP   +DM++CV               LQAIDRSPHPSHQIDV+R+ARDFMEAAKKLQLY
Sbjct: 20  SPPSKDDMVSCVMALEAALLPCLPARELQAIDRSPHPSHQIDVDRYARDFMEAAKKLQLY 79

Query: 122 FIGLQREDQPTTVELLRKDIAAMEEELKTKNELIKKQERL 3
           FI LQRED+PT VE+LRK+IA MEEEL  KNELIKKQE L
Sbjct: 80  FISLQREDKPTKVEMLRKEIALMEEELNIKNELIKKQENL 119


>ref|XP_002321001.1| predicted protein [Populus trichocarpa] gi|222861774|gb|EEE99316.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score =  131 bits (330), Expect = 5e-29
 Identities = 69/93 (74%), Positives = 71/93 (76%)
 Frame = -1

Query: 281 MIACVTXXXXXXXXXXXXXXLQAIDRSPHPSHQIDVERHARDFMEAAKKLQLYFIGLQRE 102
           MI CV               LQAIDRSPHPSHQIDVERHARDFMEAAKKLQLYFIGLQRE
Sbjct: 1   MIGCVMALEAALLPCLPARELQAIDRSPHPSHQIDVERHARDFMEAAKKLQLYFIGLQRE 60

Query: 101 DQPTTVELLRKDIAAMEEELKTKNELIKKQERL 3
           DQPT  E LRKDI  MEEELK K+ELIK+QERL
Sbjct: 61  DQPTMSETLRKDIGMMEEELKVKDELIKRQERL 93


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