BLASTX nr result

ID: Bupleurum21_contig00021116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021116
         (1161 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285824.1| PREDICTED: protein grpE [Vitis vinifera] gi|...   286   9e-75
ref|XP_002513845.1| Protein grpE, putative [Ricinus communis] gi...   281   2e-73
ref|XP_002301021.1| predicted protein [Populus trichocarpa] gi|2...   272   1e-70
gb|AFK33471.1| unknown [Lotus japonicus]                              245   1e-62
ref|XP_002307407.1| predicted protein [Populus trichocarpa] gi|2...   245   1e-62

>ref|XP_002285824.1| PREDICTED: protein grpE [Vitis vinifera] gi|302141888|emb|CBI19091.3|
            unnamed protein product [Vitis vinifera]
          Length = 298

 Score =  286 bits (731), Expect = 9e-75
 Identities = 150/254 (59%), Positives = 183/254 (72%)
 Frame = -2

Query: 1103 SFNSSLSVKATNSASQINDQDEVYVDNLENSEIVEEKIPALKSLLKVYKEAVLIGDESTA 924
            SF   L+++ +   +   ++   Y      SE  ++ +  LKSL+K YK+AVL GDE   
Sbjct: 45   SFKPFLALQDSTPYTNNEEEGSRYDVKTSKSEADQKPLSVLKSLIKAYKDAVLDGDEKAV 104

Query: 923  SIVESRICQVENEKNELVTKNSALASEMNSGKERYIRLQADFDNFRKRSEKEKLTIRSDA 744
            S +E+ I  +E+EK EL  K SAL++E+ SGKE+YIRLQADFDNFRKRSEKE+LT+R+DA
Sbjct: 105  SEIEAMIDTIESEKAELAQKVSALSAEITSGKEKYIRLQADFDNFRKRSEKERLTVRTDA 164

Query: 743  EGEVIRSMLPMVDSFERAXXXXXXXXXXXXKIDASYQGIYKQFVEIMRSLRVAVVATVGK 564
            +GEV+ S+LPM+D+FERA            KID SYQGIYKQFVEIMRS  VA VATVGK
Sbjct: 165  QGEVVESLLPMIDNFERAKQQIKPETEKEKKIDTSYQGIYKQFVEIMRSCHVAAVATVGK 224

Query: 563  PFDPLLHEAIAREQSHEFKEGIIVQEFRRGFLLGDKLLRPATVKVSAGPGKKNASTVIKE 384
            PFDP LHEAIARE+S EFKEGII+QE RRGFLLGD+LLRPA VKVS GPG+K  S V  +
Sbjct: 225  PFDPALHEAIAREESQEFKEGIIIQEIRRGFLLGDRLLRPAMVKVSTGPGRKKTSAVADK 284

Query: 383  PAEQPAAAAGDDSR 342
               QPA AAG D R
Sbjct: 285  STGQPATAAGVDER 298


>ref|XP_002513845.1| Protein grpE, putative [Ricinus communis]
           gi|223546931|gb|EEF48428.1| Protein grpE, putative
           [Ricinus communis]
          Length = 315

 Score =  281 bits (719), Expect = 2e-73
 Identities = 149/217 (68%), Positives = 172/217 (79%)
 Frame = -2

Query: 992 IPALKSLLKVYKEAVLIGDESTASIVESRICQVENEKNELVTKNSALASEMNSGKERYIR 813
           +P+L  L+ +YKEA+L+GDE T + +E+RI  +EN   ELV K S L++E+ SGKE+YIR
Sbjct: 103 LPSLTKLINIYKEAILLGDERTVTDIEARIKIIENTNYELVQKVSDLSTEITSGKEKYIR 162

Query: 812 LQADFDNFRKRSEKEKLTIRSDAEGEVIRSMLPMVDSFERAXXXXXXXXXXXXKIDASYQ 633
           LQADFDNFRKRSEKE+ TIRSDA+GEVI S+LPMVDSFERA            KID SYQ
Sbjct: 163 LQADFDNFRKRSEKERHTIRSDAQGEVIESLLPMVDSFERAKQQIKPETEMEKKIDTSYQ 222

Query: 632 GIYKQFVEIMRSLRVAVVATVGKPFDPLLHEAIAREQSHEFKEGIIVQEFRRGFLLGDKL 453
           GIYKQFVEIMRSL+VAVVATVGKPFDP LHEAIARE+S E+KEGII+QEFRRGFLLG +L
Sbjct: 223 GIYKQFVEIMRSLQVAVVATVGKPFDPSLHEAIAREESQEYKEGIIIQEFRRGFLLGGRL 282

Query: 452 LRPATVKVSAGPGKKNASTVIKEPAEQPAAAAGDDSR 342
           LRPA VKVSAGPG+K A       AEQPA AAG D R
Sbjct: 283 LRPAMVKVSAGPGRKKAPV----GAEQPATAAGVDDR 315


>ref|XP_002301021.1| predicted protein [Populus trichocarpa] gi|222842747|gb|EEE80294.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  272 bits (696), Expect = 1e-70
 Identities = 138/226 (61%), Positives = 178/226 (78%), Gaps = 2/226 (0%)
 Frame = -2

Query: 1019 ENSEIVE--EKIPALKSLLKVYKEAVLIGDESTASIVESRICQVENEKNELVTKNSALAS 846
            EN+EI E  ++ P+LK+L+K+Y++A+  GDE T   +E++   +E E +E + K S+L++
Sbjct: 48   ENNEIQEGQKRGPSLKNLMKIYRQAIFYGDEKTILDIEAKAATIEKENHEFLQKVSSLSA 107

Query: 845  EMNSGKERYIRLQADFDNFRKRSEKEKLTIRSDAEGEVIRSMLPMVDSFERAXXXXXXXX 666
            E+ SGKE+YIRLQADFDNFRKRS+KE++ IRSDA+GEVI S+LPMVDSFERA        
Sbjct: 108  EITSGKEKYIRLQADFDNFRKRSDKERVNIRSDAQGEVIESLLPMVDSFERAKQQIQPET 167

Query: 665  XXXXKIDASYQGIYKQFVEIMRSLRVAVVATVGKPFDPLLHEAIAREQSHEFKEGIIVQE 486
                KID+SYQGIYKQ V+IMR+L+VA V TVGKPFDP LHEAIARE+S E+KEGII+QE
Sbjct: 168  EKEKKIDSSYQGIYKQLVDIMRNLQVAAVPTVGKPFDPSLHEAIAREESQEYKEGIIIQE 227

Query: 485  FRRGFLLGDKLLRPATVKVSAGPGKKNASTVIKEPAEQPAAAAGDD 348
            FRRGFL+G++L+RPA VKVS+GPG K +S   +  AEQPA AAG D
Sbjct: 228  FRRGFLIGNRLIRPAMVKVSSGPGNKKSSVGTETRAEQPATAAGMD 273


>gb|AFK33471.1| unknown [Lotus japonicus]
          Length = 313

 Score =  245 bits (626), Expect = 1e-62
 Identities = 137/263 (52%), Positives = 181/263 (68%), Gaps = 1/263 (0%)
 Frame = -2

Query: 1127 FPNTKTPF-SFNSSLSVKATNSASQINDQDEVYVDNLENSEIVEEKIPALKSLLKVYKEA 951
            F N +T F SF +S    ++        Q++V V N +  +   + +P+L  L++ YK+A
Sbjct: 54   FRNQRTLFKSFVASHDSLSSTCDETGETQNDVRVANDDEDK---KPLPSLMVLIEAYKDA 110

Query: 950  VLIGDESTASIVESRICQVENEKNELVTKNSALASEMNSGKERYIRLQADFDNFRKRSEK 771
            +L GDE T S +E R+  V NEKN+L  + S L++   S KE+Y+RLQADFDNFRKR +K
Sbjct: 111  ILSGDEVTVSQIEERLHLVANEKNKLAQELSTLSANQVSSKEKYLRLQADFDNFRKRYDK 170

Query: 770  EKLTIRSDAEGEVIRSMLPMVDSFERAXXXXXXXXXXXXKIDASYQGIYKQFVEIMRSLR 591
            EKL I++DA+ E I  +L MVD+FERA            KID SYQGIY+QFVE++RS +
Sbjct: 171  EKLNIQADAQKEFIEKLLLMVDNFERAKQQIKAHTEKEKKIDVSYQGIYRQFVEVLRSHQ 230

Query: 590  VAVVATVGKPFDPLLHEAIAREQSHEFKEGIIVQEFRRGFLLGDKLLRPATVKVSAGPGK 411
            V+VVATVGKPF+PLLHEAIARE+S EFKEGII++E RRGFLL D++LRPA VKVS+GPG 
Sbjct: 231  VSVVATVGKPFNPLLHEAIAREESAEFKEGIIIKERRRGFLLKDQVLRPAQVKVSSGPGN 290

Query: 410  KNASTVIKEPAEQPAAAAGDDSR 342
            K +     +  EQP+ AAG D R
Sbjct: 291  KKSPVAPAKSMEQPSTAAGIDER 313


>ref|XP_002307407.1| predicted protein [Populus trichocarpa] gi|222856856|gb|EEE94403.1|
            predicted protein [Populus trichocarpa]
          Length = 229

 Score =  245 bits (626), Expect = 1e-62
 Identities = 131/218 (60%), Positives = 162/218 (74%)
 Frame = -2

Query: 1001 EEKIPALKSLLKVYKEAVLIGDESTASIVESRICQVENEKNELVTKNSALASEMNSGKER 822
            +++ P LK+LLK+Y++A+  GDE T   +E+++  VE E NE V K S  ++E+ SGKE+
Sbjct: 16   QKRGPGLKNLLKIYRQAISCGDEKTMLDIEAKVGIVEKENNESVKKVSPSSAEITSGKEK 75

Query: 821  YIRLQADFDNFRKRSEKEKLTIRSDAEGEVIRSMLPMVDSFERAXXXXXXXXXXXXKIDA 642
             IRLQADFDN RKR+EKEKL IRSDA+GEVI S+LP+VDSFERA            KID 
Sbjct: 76   CIRLQADFDNVRKRTEKEKLNIRSDAQGEVIESLLPVVDSFERAKQQVQPETDKEKKIDT 135

Query: 641  SYQGIYKQFVEIMRSLRVAVVATVGKPFDPLLHEAIAREQSHEFKEGIIVQEFRRGFLLG 462
             YQG YK F ++MRSL+VA V TVGKPFDP LHEAIARE+S E+KEGII+QEFRR FLLG
Sbjct: 136  GYQGRYKHFADMMRSLQVAAVPTVGKPFDPSLHEAIAREESLEYKEGIIIQEFRRVFLLG 195

Query: 461  DKLLRPATVKVSAGPGKKNASTVIKEPAEQPAAAAGDD 348
            ++L++PATVKVS+G G K AS      AEQPA  AG D
Sbjct: 196  NRLIKPATVKVSSGLGSKKASV----GAEQPATTAGMD 229


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