BLASTX nr result

ID: Bupleurum21_contig00021107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021107
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530889.1| conserved hypothetical protein [Ricinus comm...   150   4e-34
gb|AEC12445.1| DNA N-glycosylase/DNA-(apurinic or apyrimidinic s...   140   4e-31
ref|XP_004164145.1| PREDICTED: transcriptional activator DEMETER...   139   9e-31
ref|XP_004150492.1| PREDICTED: transcriptional activator DEMETER...   139   9e-31
ref|XP_002871102.1| hypothetical protein ARALYDRAFT_487239 [Arab...   139   1e-30

>ref|XP_002530889.1| conserved hypothetical protein [Ricinus communis]
            gi|223529542|gb|EEF31495.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1876

 Score =  150 bits (380), Expect = 4e-34
 Identities = 85/155 (54%), Positives = 110/155 (70%), Gaps = 6/155 (3%)
 Frame = -3

Query: 567  DLISKVECLNIYD-ECQQLVVQDQKFHAETLVKIGFP--KMRKALPKVALDSETLRMSKL 397
            ++I ++E LN+ + + +Q  +   K     +   GF   K RK  PKV LD ET R+ KL
Sbjct: 812  EIIYRMEHLNLNEVKGEQTAIVPYKGDGALIPYDGFEIIKKRKPRPKVDLDPETERVWKL 871

Query: 396  L--DNGGKDSEDMEGDKKEWWAKEREVFCGRANSFIARMHLMQGDRRFSKWKGSVVDSVV 223
            L    GG+  E  + +KK+WW +ER VF GRA+SFIARMHL+QGDRRFSKWKGSVVDSV+
Sbjct: 872  LMWKEGGEGLEGTDQEKKQWWEEERRVFGGRADSFIARMHLVQGDRRFSKWKGSVVDSVI 931

Query: 222  GVYLTQNVTDFLSSSVFINLAAKYPVKS-RNKVAE 121
            GV+LTQNV+D LSSS F+NLAAK+P+KS RN+  E
Sbjct: 932  GVFLTQNVSDHLSSSAFMNLAAKFPLKSMRNRTCE 966


>gb|AEC12445.1| DNA N-glycosylase/DNA-(apurinic or apyrimidinic site) lyase
            [Gossypium hirsutum]
          Length = 2055

 Score =  140 bits (354), Expect = 4e-31
 Identities = 74/115 (64%), Positives = 92/115 (80%), Gaps = 2/115 (1%)
 Frame = -3

Query: 468  GFPKMRKAL-PKVALDSETLRMSKLLDNGGKDSEDMEG-DKKEWWAKEREVFCGRANSFI 295
            GF  ++K + P+V LD ET R+  LL   GK+ ED EG DK++WW +ER VF GR +SFI
Sbjct: 1008 GFESIKKKVRPRVDLDPETNRVWNLLM--GKEGEDTEGTDKEKWWEEERRVFHGRVDSFI 1065

Query: 294  ARMHLMQGDRRFSKWKGSVVDSVVGVYLTQNVTDFLSSSVFINLAAKYPVKSRNK 130
            ARMHL+QGDRRFSKWKGSVVDSV+GV+LTQNV+D LSSS F++LAAK+P+KS  K
Sbjct: 1066 ARMHLVQGDRRFSKWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLAAKFPLKSSCK 1120


>ref|XP_004164145.1| PREDICTED: transcriptional activator DEMETER-like [Cucumis sativus]
          Length = 1736

 Score =  139 bits (351), Expect = 9e-31
 Identities = 70/119 (58%), Positives = 93/119 (78%), Gaps = 2/119 (1%)
 Frame = -3

Query: 477  VKIGFPKMRKALPKVALDSETLRMSKLL--DNGGKDSEDMEGDKKEWWAKEREVFCGRAN 304
            V+  + + RKA P+V +D ET R+  LL    G +  E  E DK++WW +ER+VF GRA+
Sbjct: 691  VESEYLRKRKARPRVDIDPETERIWNLLMGKEGSEGIESHEKDKEKWWEEERKVFRGRAD 750

Query: 303  SFIARMHLMQGDRRFSKWKGSVVDSVVGVYLTQNVTDFLSSSVFINLAAKYPVKSRNKV 127
            SFIARMHL+QGDRRFS+WKGSVVDSV+GV+LTQNV+D LSSS F++LAA++PVKS + +
Sbjct: 751  SFIARMHLVQGDRRFSRWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLAARFPVKSASNL 809


>ref|XP_004150492.1| PREDICTED: transcriptional activator DEMETER-like [Cucumis sativus]
          Length = 1679

 Score =  139 bits (351), Expect = 9e-31
 Identities = 70/119 (58%), Positives = 93/119 (78%), Gaps = 2/119 (1%)
 Frame = -3

Query: 477 VKIGFPKMRKALPKVALDSETLRMSKLL--DNGGKDSEDMEGDKKEWWAKEREVFCGRAN 304
           V+  + + RKA P+V +D ET R+  LL    G +  E  E DK++WW +ER+VF GRA+
Sbjct: 634 VESEYLRKRKARPRVDIDPETERIWNLLMGKEGSEGIESHEKDKEKWWEEERKVFRGRAD 693

Query: 303 SFIARMHLMQGDRRFSKWKGSVVDSVVGVYLTQNVTDFLSSSVFINLAAKYPVKSRNKV 127
           SFIARMHL+QGDRRFS+WKGSVVDSV+GV+LTQNV+D LSSS F++LAA++PVKS + +
Sbjct: 694 SFIARMHLVQGDRRFSRWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLAARFPVKSASNL 752


>ref|XP_002871102.1| hypothetical protein ARALYDRAFT_487239 [Arabidopsis lyrata subsp.
            lyrata] gi|297316939|gb|EFH47361.1| hypothetical protein
            ARALYDRAFT_487239 [Arabidopsis lyrata subsp. lyrata]
          Length = 1997

 Score =  139 bits (349), Expect = 1e-30
 Identities = 81/158 (51%), Positives = 107/158 (67%), Gaps = 6/158 (3%)
 Frame = -3

Query: 573  LMDLISKVECLNIYDECQQLVVQDQK----FHAETLVKIGFPKMRKALPKVALDSETLRM 406
            + ++I +++ LN+ D+ ++   Q+Q     +  +  V     K +K  PKV LD ET R+
Sbjct: 914  IAEIIYRMQNLNLGDKNRE---QEQNALVLYRGDGAVVPYESKKQKPRPKVDLDDETTRI 970

Query: 405  SKLLDNGGKDSEDMEGDKKE--WWAKEREVFCGRANSFIARMHLMQGDRRFSKWKGSVVD 232
              LL   G+   D E DKK+  WW +ER VF GRA+SFIARMHL+QGDRRFS WKGSVVD
Sbjct: 971  WNLLMGKGEKEGDEEMDKKKEKWWEEERRVFRGRADSFIARMHLVQGDRRFSPWKGSVVD 1030

Query: 231  SVVGVYLTQNVTDFLSSSVFINLAAKYPVKSRNKVAED 118
            SV+GV+LTQNVTD LSSS F++LAA++P KS N   ED
Sbjct: 1031 SVIGVFLTQNVTDHLSSSAFMSLAARFPPKS-NSSRED 1067


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