BLASTX nr result

ID: Bupleurum21_contig00021087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021087
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36857.3| unnamed protein product [Vitis vinifera]              322   7e-86
ref|XP_002268579.1| PREDICTED: uncharacterized protein LOC100267...   322   7e-86
ref|XP_002523069.1| DNA binding protein, putative [Ricinus commu...   279   9e-73
ref|XP_002319512.1| predicted protein [Populus trichocarpa] gi|2...   244   2e-62
ref|XP_002330167.1| predicted protein [Populus trichocarpa] gi|2...   236   6e-60

>emb|CBI36857.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score =  322 bits (826), Expect = 7e-86
 Identities = 153/262 (58%), Positives = 189/262 (72%), Gaps = 10/262 (3%)
 Frame = +2

Query: 134 MDDTNV---------ENSLICCSICLDLVADHEERSVAKLQCGHEFHLDCIGSAFNMKGA 286
           MDD +V         E S + CSICLDLV D+ ERS AKLQCGHEFHLDCIGSAFNMKGA
Sbjct: 1   MDDDDVGGVEPPSHGEVSFVSCSICLDLVTDNGERSRAKLQCGHEFHLDCIGSAFNMKGA 60

Query: 287 MQCPNCRKIEGGRWLYATGSAHLAADFSIDDWPLSEEQLEYNFPEIPFGVHWCPFSGLTG 466
           MQCPNCRKIE GRWL+A GSA    +FS+DDW   EE  ++N+ E+PF V WCPFSG T 
Sbjct: 61  MQCPNCRKIERGRWLFANGSARSFPEFSMDDWTPDEETYDFNYSEMPFRVQWCPFSGFTQ 120

Query: 467 IHSPFEDVDPPSTTHHELQGNHAIFGEHITPPALARSHVAYVQPIPRAISNASENVDNPF 646
           + S FE+V+ PSTTHH+LQG+HAI  EH    + A S+VAY  PIP   SN+SE+VD+  
Sbjct: 121 VRSSFEEVESPSTTHHDLQGHHAILSEHAAASSAAHSYVAYFGPIPPTHSNSSESVDDLN 180

Query: 647 LRHRGNGQFAHNEIYNPNVFPAMNFQFQSWGHHVPPIFASRSHLNGADQG-SVPPTLRST 823
             H  N   AH+EI++ + FPA++ Q+QSWGHH PP   + SH+NGA+Q  ++P TLRS 
Sbjct: 181 FNHHWNSLSAHSEIFSSHAFPAIDIQYQSWGHHSPPFSPTSSHINGAEQAPALPATLRSM 240

Query: 824 RVDSDAISRSGPFAHPYLYGPG 889
           R +SDA++RSG F HP L+GPG
Sbjct: 241 RGESDAMTRSGSFVHPLLFGPG 262


>ref|XP_002268579.1| PREDICTED: uncharacterized protein LOC100267498 [Vitis vinifera]
          Length = 407

 Score =  322 bits (826), Expect = 7e-86
 Identities = 153/262 (58%), Positives = 189/262 (72%), Gaps = 10/262 (3%)
 Frame = +2

Query: 134 MDDTNV---------ENSLICCSICLDLVADHEERSVAKLQCGHEFHLDCIGSAFNMKGA 286
           MDD +V         E S + CSICLDLV D+ ERS AKLQCGHEFHLDCIGSAFNMKGA
Sbjct: 11  MDDDDVGGVEPPSHGEVSFVSCSICLDLVTDNGERSRAKLQCGHEFHLDCIGSAFNMKGA 70

Query: 287 MQCPNCRKIEGGRWLYATGSAHLAADFSIDDWPLSEEQLEYNFPEIPFGVHWCPFSGLTG 466
           MQCPNCRKIE GRWL+A GSA    +FS+DDW   EE  ++N+ E+PF V WCPFSG T 
Sbjct: 71  MQCPNCRKIERGRWLFANGSARSFPEFSMDDWTPDEETYDFNYSEMPFRVQWCPFSGFTQ 130

Query: 467 IHSPFEDVDPPSTTHHELQGNHAIFGEHITPPALARSHVAYVQPIPRAISNASENVDNPF 646
           + S FE+V+ PSTTHH+LQG+HAI  EH    + A S+VAY  PIP   SN+SE+VD+  
Sbjct: 131 VRSSFEEVESPSTTHHDLQGHHAILSEHAAASSAAHSYVAYFGPIPPTHSNSSESVDDLN 190

Query: 647 LRHRGNGQFAHNEIYNPNVFPAMNFQFQSWGHHVPPIFASRSHLNGADQG-SVPPTLRST 823
             H  N   AH+EI++ + FPA++ Q+QSWGHH PP   + SH+NGA+Q  ++P TLRS 
Sbjct: 191 FNHHWNSLSAHSEIFSSHAFPAIDIQYQSWGHHSPPFSPTSSHINGAEQAPALPATLRSM 250

Query: 824 RVDSDAISRSGPFAHPYLYGPG 889
           R +SDA++RSG F HP L+GPG
Sbjct: 251 RGESDAMTRSGSFVHPLLFGPG 272


>ref|XP_002523069.1| DNA binding protein, putative [Ricinus communis]
           gi|223537631|gb|EEF39254.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 430

 Score =  279 bits (713), Expect = 9e-73
 Identities = 126/251 (50%), Positives = 171/251 (68%)
 Frame = +2

Query: 137 DDTNVENSLICCSICLDLVADHEERSVAKLQCGHEFHLDCIGSAFNMKGAMQCPNCRKIE 316
           D+    +S I CSICLD V D+  RS AKLQCGHEFHLDCIGSAFNMKGAMQCPNCRK+E
Sbjct: 40  DEDEPSSSGISCSICLDTVLDNGGRSRAKLQCGHEFHLDCIGSAFNMKGAMQCPNCRKVE 99

Query: 317 GGRWLYATGSAHLAADFSIDDWPLSEEQLEYNFPEIPFGVHWCPFSGLTGIHSPFEDVDP 496
            G+WLYA GS  +  + S+DDW   E+  + ++ E+P+ VHWCPF  L  + S F +V+ 
Sbjct: 100 KGQWLYANGSNRMLPEMSMDDWIPEEDFYDLSYSEMPYRVHWCPFGELARVGSSFGEVES 159

Query: 497 PSTTHHELQGNHAIFGEHITPPALARSHVAYVQPIPRAISNASENVDNPFLRHRGNGQFA 676
           PSTT+H+L+G+H+++ EH    ++A S+VAYV PIP   S +++ +D+P   H  NG   
Sbjct: 160 PSTTYHDLRGHHSVYAEHTAASSVAHSYVAYVGPIPPNPSRSNDGIDDPNFNHHWNGLSG 219

Query: 677 HNEIYNPNVFPAMNFQFQSWGHHVPPIFASRSHLNGADQGSVPPTLRSTRVDSDAISRSG 856
            +EI++ + FPA+N Q+ +WG   PP   S SH+NG D  SVP T RS+  +SD  +RS 
Sbjct: 220 RHEIFSTHAFPAINIQYHNWGRRSPPFSVSSSHINGVDPASVPMTFRSSVGESDTRTRST 279

Query: 857 PFAHPYLYGPG 889
            F HP ++G G
Sbjct: 280 SFPHPIVFGHG 290


>ref|XP_002319512.1| predicted protein [Populus trichocarpa] gi|222857888|gb|EEE95435.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  244 bits (623), Expect = 2e-62
 Identities = 124/251 (49%), Positives = 159/251 (63%), Gaps = 5/251 (1%)
 Frame = +2

Query: 164 ICCSICLDLVADHEERSVAKLQCGHEFHLDCIGSAFNMKGAMQCPNCRKIEGGRWLYATG 343
           + CSICL++VAD+ +RS AKLQCGH+FHLDCIGSAFN+KGAMQCPNCRKIE G+WLYA G
Sbjct: 21  VSCSICLEVVADNGDRSWAKLQCGHQFHLDCIGSAFNVKGAMQCPNCRKIEKGQWLYANG 80

Query: 344 SAHLAADFSIDDWPLSEEQLEYNFPEIPFGVHWCPFSGLTGIHSPFEDVDPPSTTHHELQ 523
              L  +FS+DDW   E+  + ++ E+ FGVHWCPF  L  + S FE+ +  S  +H+L 
Sbjct: 81  CRSL-PEFSMDDWAHDEDLYDLSYSEMSFGVHWCPFGSLARLPSSFEEGEFSSNAYHDLL 139

Query: 524 GNHAIFGEHITPPALAR---SHVAYVQPIPRAISNASENV-DNPFLRHRGNGQFAHNEIY 691
           G H IFGEH    + A     ++AY  PI  + SN+S +V D        NG    +EI 
Sbjct: 140 GQHPIFGEHTAAVSSATHPCPYIAYFGPIHPSSSNSSGSVSDVSSFNSHWNGPSVPSEIP 199

Query: 692 NPNVFPAMNFQFQSWGHHVPPIFASRSHLNGADQGSVPP-TLRSTRVDSDAISRSGPFAH 868
           +   FPAM+  + SW HH PP   + + +  ADQ SVPP T RS R  SD   RSG F H
Sbjct: 200 SSYAFPAMDVHYHSWEHHSPPFSTTGNRIGNADQPSVPPVTQRSARTSSDLPPRSGSFIH 259

Query: 869 PYLYGPGYAES 901
           P+L G GY  +
Sbjct: 260 PFLVGHGYGSN 270


>ref|XP_002330167.1| predicted protein [Populus trichocarpa] gi|222871623|gb|EEF08754.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  236 bits (602), Expect = 6e-60
 Identities = 121/245 (49%), Positives = 156/245 (63%), Gaps = 5/245 (2%)
 Frame = +2

Query: 164 ICCSICLDLVADHEERSVAKLQCGHEFHLDCIGSAFNMKGAMQCPNCRKIEGGRWLYATG 343
           + CSICL++V D+ +RS AKLQCGH+FHLDCIGSAFN+KGAMQCPNCRKIE G+WLYA G
Sbjct: 32  VSCSICLEVVTDNGDRSWAKLQCGHQFHLDCIGSAFNVKGAMQCPNCRKIEKGQWLYANG 91

Query: 344 SAHLAADFSIDDWPLSEEQLEYNFPEIPFGVHWCPFSGLTGIHSPFEDVDPPSTTHHELQ 523
              L  +F++DDW   E+  + ++ E+ FGVHWCPF  L  + S FE+ + PS  +H+L 
Sbjct: 92  CRSL-PEFTMDDWAHDEDLYDLSYSEMSFGVHWCPFGSLARLPSSFEEGEFPSNAYHDLL 150

Query: 524 GNHAIFGEHITPPALAR---SHVAYVQPIPRAISNASENV-DNPFLRHRGNGQFAHNEIY 691
           G HAIF EH    + A     ++AY  PI  + SNAS +V D     +  NG    +EI 
Sbjct: 151 G-HAIFAEHTAAVSSATHQCPYIAYFGPIHPSSSNASVSVSDGSSFNNHWNGPSVPSEIP 209

Query: 692 NPNVFPAMNFQFQSWGHHVPPIFASRSHLNGADQGSVPP-TLRSTRVDSDAISRSGPFAH 868
           +   FPAM+  + SW HH PP   + + +  ADQ SVPP T RS R  SD   RSG   H
Sbjct: 210 SSYAFPAMDIHYHSWEHHSPPFSTTGNRIGNADQPSVPPVTQRSARTSSDLPPRSGSLMH 269

Query: 869 PYLYG 883
           P+L G
Sbjct: 270 PFLVG 274


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