BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021082
         (2306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                       964   0.0  
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     822   0.0  
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   781   0.0  
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   751   0.0  
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     751   0.0  

>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score =  964 bits (2493), Expect = 0.0
 Identities = 484/765 (63%), Positives = 586/765 (76%), Gaps = 8/765 (1%)
 Frame = +3

Query: 33   ICSGTLQDNLYILRPTQSILQLS-ESNNTSSNINKRKVPSEMNQTLLWHLRLGHINLRRI 209
            ICS   ++NLY LRPT++ + L+ E   T    NK++  S  +   LWHLRLGHINL RI
Sbjct: 400  ICSAIRENNLYKLRPTRANVVLNTEMFRTLETQNKKQKVS--SNAYLWHLRLGHINLNRI 457

Query: 210  QRLVADGPLGSLVVEPLPVCESCLEGKMTNRPFKAKGNRAKEVLELIHSDLCGPMNVQAR 389
            +RLV  G L  L    LP CESCLEGKMT R F  KG RAK  LEL+HSDLCGPMNV+AR
Sbjct: 458  ERLVKSGILNQLEDNSLPPCESCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKAR 517

Query: 390  GGYEYFVTFIDDYSRYGYIYLLHRKSECFDKFKEYKSVTEKRHGKYIKSLRSDRGGEYML 569
            GGYEYF++FIDD+SRYG++YLLH KSE F+KFKEYK+  E   GK IK+LRSDRGGEYM 
Sbjct: 518  GGYEYFISFIDDFSRYGHVYLLHHKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMD 577

Query: 570  GEFRDYLSEHGIESQLSAPGTPQQNGVAERRNRTLLESVRSMMSYSDLPISFWGLALEKA 749
             +F+DYL E GI+SQLSAP TPQQNGV+ERRNRTLL+ VRSMMSY+ LP SFWG ALE A
Sbjct: 578  SKFQDYLIEFGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETA 637

Query: 750  AYLLNLVPSKSVPKTPLELWTGDKPSLRHIRTWGCPAHVLNKNVTKLESRTEVRLLVGYP 929
             ++LN VPSKSV +TP ELW G K SLR+ R WGCPAHVL +N  KLE R+++ L VGYP
Sbjct: 638  IHILNNVPSKSVLETPYELWKGRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYP 697

Query: 930  KGTKGYLFYSPESRDVIVSTNARFLEEDYIINHKPKSSVVLEQLEGGNAGPQP-----VV 1094
            K ++G LFY P+   V VSTNA FLEED+  NH+P+S +VL+++   NA  +P     VV
Sbjct: 698  KESRGGLFYHPQENKVFVSTNATFLEEDHXRNHQPRSKIVLKEMFK-NATDKPSSSTKVV 756

Query: 1095 QEPQ--DDAQPDNNTQVPRRSGRVVRQPERFMFLGESSDLVSDEHEDDPRTYEEALQDID 1268
             +    D +      +VPRRSGRVV QP R++ L E+  ++ D+  +DP TY++A+ D+D
Sbjct: 757  DKANISDQSHTSQELRVPRRSGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVD 816

Query: 1269 ANKWQKAMKDEMESMYSNHVWELVEPPKGVRPIGCKWIYKRKRGPKGEVKAFKARLVAKG 1448
             ++W KAM  EMESMY N VW LV+ P  V+PIGCKWIYKRKR   G+V+ FKARLVAKG
Sbjct: 817  RDQWIKAMNLEMESMYFNSVWTLVDLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKG 876

Query: 1449 YTQKEGIDYEETFSPVAMLKSIRILLSIAAHLNWEIWQMDVKTAFLNGTLEEIIYMQQPE 1628
            YTQKEG+DYEETFSPVAMLKSIRILLSIA   N+EIWQMDVKTAFLNG LEE IYM QPE
Sbjct: 877  YTQKEGVDYEETFSPVAMLKSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPE 936

Query: 1629 GFIKKGQEHLVCKLTKSIYGLKQASKCWNAHFDHVIQTFGFDQCMSEACVYKKGDGNSVV 1808
            GFI + QE  VCKL KSIYGLKQAS+ WN  FD  I+++GF+Q + E CVYKK   + V 
Sbjct: 937  GFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVA 996

Query: 1809 FLVLYVDDILLIGNNVNMMKDVKAWLFQNFEMKDLGEADYILGIKVKRDRSKRMLALSQE 1988
            FL+LYVDDILLIGN+V  + DVK WL   F+MKDLGEA YILGI++ R+R  + LA+SQ 
Sbjct: 997  FLILYVDDILLIGNDVEYLTDVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTLAMSQA 1056

Query: 1989 AYIDTVLARFNMQNFKKGNLPFRHGLVLSKDQCPKTPDQIESMKAVPYASACGSLMYAM* 2168
            +YID VL+R+ MQN KKG LPFRHG+ LSK+QCPKTP ++E M+ +PY+SA GSLMYAM 
Sbjct: 1057 SYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAML 1116

Query: 2169 CTRPDICFAVGMISRYQSNPGQEHWSAVKAILKYLRRTKEYMLVY 2303
            CTRPDIC++VG++SRYQSNPG++HW+AVK ILKYLRRT+ YMLVY
Sbjct: 1117 CTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTRNYMLVY 1161


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  822 bits (2122), Expect = 0.0
 Identities = 420/762 (55%), Positives = 536/762 (70%), Gaps = 6/762 (0%)
 Frame = +3

Query: 36   CSGTLQDNLYILRP-TQSILQLSESNNTSSNIN-KRKVPSEMNQTLLWHLRLGHINLRRI 209
            CS  L+D  Y   P    +  L+   +   NIN +R++ +++N T +WH RLGHIN +R+
Sbjct: 393  CSIYLRDMFYFHAPLVNGLYVLNLEASPIYNINTERQLSNDINPTFIWHCRLGHINKKRM 452

Query: 210  QRLVADGPLGSLVVEPLPVCESCLEGKMTNRPFKAKGNRAKEVLELIHSDLCGPMNVQAR 389
            ++L  DG L S   E    CESCL GKMT  PF     RA ++L L+H+D+CGPM+  AR
Sbjct: 453  EKLHKDGLLHSFDFESFETCESCLLGKMTKAPFTGHSERASDLLALVHTDVCGPMSSTAR 512

Query: 390  GGYEYFVTFIDDYSRYGYIYLLHRKSECFDKFKEYKSVTEKRHGKYIKSLRSDRGGEYML 569
            GGY+YF+TF DD+SRYGYIYL+  KSE F+KFKE+++  +   GK IK LRSDRGGEY+ 
Sbjct: 513  GGYQYFITFTDDFSRYGYIYLMRHKSESFEKFKEFQNEVQNHLGKTIKFLRSDRGGEYVS 572

Query: 570  GEFRDYLSEHGIESQLSAPGTPQQNGVAERRNRTLLESVRSMMSYSDLPISFWGLALEKA 749
             EF ++L + GI  QL+ PGTPQ NGV+ERRNRTLL+ VRSMMS SDLP+SFWG ALE A
Sbjct: 573  QEFGNHLKDCGIVPQLTPPGTPQWNGVSERRNRTLLDMVRSMMSQSDLPLSFWGYALETA 632

Query: 750  AYLLNLVPSKSVPKTPLELWTGDKPSLRHIRTWGCPAHVLNKNVTKLESRTEVRLLVGYP 929
            A  LN VPSKSV KTP E+WTG  PSL  ++ WGC A+V      KL  +++   +VGYP
Sbjct: 633  ALTLNRVPSKSVEKTPYEIWTGQPPSLSFLKIWGCEAYVKRLQSDKLTPKSDKCFVVGYP 692

Query: 930  KGTKGYLFYSPESRDVIVSTNARFLEEDYIINHKPKSSVVLEQL----EGGNAGPQPVVQ 1097
            K TKGY FY+ E   V V+ +  FLE++++        V LE++    E  +A  +P  Q
Sbjct: 693  KETKGYYFYNREQAKVFVARHGVFLEKEFLSRRVSGIRVHLEEVQETPETVSATTEPQ-Q 751

Query: 1098 EPQDDAQPDNNTQVPRRSGRVVRQPERFMFLGESSDLVSDEHEDDPRTYEEALQDIDANK 1277
            E Q  A P  +T  PRRS R  R P+R+    +   L+ D   D+P+TYEEA+   D+NK
Sbjct: 752  EDQSVAPPVVDTPAPRRSERSRRAPDRYTGAEQRDILLLDN--DEPKTYEEAMVGHDSNK 809

Query: 1278 WQKAMKDEMESMYSNHVWELVEPPKGVRPIGCKWIYKRKRGPKGEVKAFKARLVAKGYTQ 1457
            W  AMK E+ESMY N VW LV+PP GV+ I CKW++K+K    G V  +KARLVAKG+ Q
Sbjct: 810  WLGAMKSEIESMYDNQVWNLVDPPDGVKTIECKWLFKKKADMDGNVHIYKARLVAKGFKQ 869

Query: 1458 KEGIDYEETFSPVAMLKSIRILLSIAAHLNWEIWQMDVKTAFLNGTLEEIIYMQQPEGFI 1637
             +G+DY+ETFSPVAMLKSIRI+L+IAA+ ++EIWQMDVKTAFLNG L E +YM QP+GF+
Sbjct: 870  IQGVDYDETFSPVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGNLSEDVYMIQPQGFV 929

Query: 1638 KKGQEHLVCKLTKSIYGLKQASKCWNAHFDHVIQTFGFDQCMSEACVYKKGDGNSVVFLV 1817
                   +CKL KSIYGLKQAS+ WN  FD VI+ FGF +   EACVYKK  G+++VFL+
Sbjct: 930  DPESPGKICKLQKSIYGLKQASRSWNIRFDEVIKGFGFIKNEEEACVYKKVSGSAIVFLI 989

Query: 1818 LYVDDILLIGNNVNMMKDVKAWLFQNFEMKDLGEADYILGIKVKRDRSKRMLALSQEAYI 1997
            LYVDDILLIGN++ M++ VK+ L  +F MKDLGEA YILGI++ RDRSKR++ LSQ  YI
Sbjct: 990  LYVDDILLIGNDIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYI 1049

Query: 1998 DTVLARFNMQNFKKGNLPFRHGLVLSKDQCPKTPDQIESMKAVPYASACGSLMYAM*CTR 2177
            D VL RFNM + KKG LP  HG+ LSK+QCP+T D+   M  VPYASA GS+MYAM CTR
Sbjct: 1050 DKVLKRFNMHDSKKGFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTR 1109

Query: 2178 PDICFAVGMISRYQSNPGQEHWSAVKAILKYLRRTKEYMLVY 2303
            PD+ +A+   SRYQS+PG+ HW+AVK ILKYLRRTK+  LVY
Sbjct: 1110 PDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLVY 1151


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  781 bits (2018), Expect = 0.0
 Identities = 404/775 (52%), Positives = 511/775 (65%), Gaps = 15/775 (1%)
 Frame = +3

Query: 24   KQIICSGTLQDNLYILRPTQSILQLSESNNTSSNINKRKVPS-EMNQTLLWHLRLGHINL 200
            K   CS    D  Y   P  + L +   +    NI  +K  S ++N T LWH RLGHIN 
Sbjct: 34   KNKCCSFDRDDMFYGSAPLDNGLHVLNQSMPIYNIRTKKFKSNDLNPTFLWHCRLGHINE 93

Query: 201  RRIQRLVADGPLGSLVVEPLPVCESCLEGKMTNRPFKAKGNRAKEVLELIHSDLCGPMNV 380
            + IQ+L +DG L S   E    CESCL GKMT  PF     RA ++L LIH+D+CGPM+ 
Sbjct: 94   KHIQKLHSDGLLNSFDYESYETCESCLLGKMTKAPFTGHSERASDLLGLIHTDVCGPMST 153

Query: 381  QARGGYEYFVTFIDDYSRYGYIYLLHRKSECFDKFKEYKSVTEKRHGKYIKSLRSDRGGE 560
             ARG Y+YF+TF DD+SRYGY+YL+  KS+ F+ FKE+++  + + GK IK+LRSDRGGE
Sbjct: 154  SARGNYQYFITFTDDFSRYGYVYLMKHKSKSFENFKEFQNEVQNQFGKSIKALRSDRGGE 213

Query: 561  YMLGEFRDYLSEHGIESQLSAPGTPQQNGVAERRNRTLLESVRSMMSYSDLPISFWGLAL 740
            Y+   F D+L E GI SQL+ PGTPQ NGV+ERRNRTLL+ VRSMMS++DLP  FWG AL
Sbjct: 214  YLSQVFSDHLRECGIVSQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHTDLPSPFWGYAL 273

Query: 741  EKAAYLLNLVPSKSVPKTPLELWTGDKPSLRHIRTWGCPAHVLNKNVTKLESRTEVRLLV 920
            E +A++LN  PSKSV KTP E+WTG  P+L  ++ WGC ++       KL  +++    V
Sbjct: 274  ETSAFMLNRCPSKSVEKTPYEIWTGKVPNLSFLKIWGCESYAKRLITDKLGPKSDKCYFV 333

Query: 921  GYPKGTKGYLFYSPESRDVIVSTNARFLEEDYIINHKPKSSVVLEQLEGGNAGPQPVVQE 1100
            GYPK TKGY FY P    V V  N  FLE +++      S V+LE++      PQ  V  
Sbjct: 334  GYPKETKGYYFYHPTDNKVFVVRNGAFLEREFLSKGTSGSKVLLEEVRE----PQGDVPT 389

Query: 1101 PQDDAQPDNNTQVP--------RRSGRVVRQPERFMFLGESSDLVSDEH------EDDPR 1238
             Q++ Q D    V         RRS R   +P+RF       D V D+H       D+P 
Sbjct: 390  SQEEHQLDLRRVVEPILVEPEVRRSERSRHEPDRFR------DWVMDDHALFMIESDEPT 443

Query: 1239 TYEEALQDIDANKWQKAMKDEMESMYSNHVWELVEPPKGVRPIGCKWIYKRKRGPKGEVK 1418
            +YEEAL   D++KW +A K EMESM  N VW LV+ P GV+PI CKWI+K+K    G ++
Sbjct: 444  SYEEALMGPDSDKWLEAAKSEMESMSQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQ 503

Query: 1419 AFKARLVAKGYTQKEGIDYEETFSPVAMLKSIRILLSIAAHLNWEIWQMDVKTAFLNGTL 1598
             +KA LVAKGY Q  GIDY+ET+SPVAMLKSIRILL+ AAH ++EIWQMDVKTAFLNG L
Sbjct: 504  IYKAGLVAKGYKQVHGIDYDETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNL 563

Query: 1599 EEIIYMQQPEGFIKKGQEHLVCKLTKSIYGLKQASKCWNAHFDHVIQTFGFDQCMSEACV 1778
            EE +YM QPEGF        VCKL +SIYGLKQAS+ WN  F+  I+ F F +   E CV
Sbjct: 564  EEHVYMTQPEGFTVPEAARKVCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCV 623

Query: 1779 YKKGDGNSVVFLVLYVDDILLIGNNVNMMKDVKAWLFQNFEMKDLGEADYILGIKVKRDR 1958
            YKK  G++V FLVLYVDDILL+GN++ +++ VK WL   F MKD+GEA YILGI++ RDR
Sbjct: 624  YKKTSGSAVAFLVLYVDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDR 683

Query: 1959 SKRMLALSQEAYIDTVLARFNMQNFKKGNLPFRHGLVLSKDQCPKTPDQIESMKAVPYAS 2138
              +++ LSQ+ YID VL RFNM + KKG +P  HG+ LSK QCP T D+ E M  +PYAS
Sbjct: 684  LNKIIGLSQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYAS 743

Query: 2139 ACGSLMYAM*CTRPDICFAVGMISRYQSNPGQEHWSAVKAILKYLRRTKEYMLVY 2303
            A GS+MYAM  TRPD+  A+ M SRYQS+PG+ HW  V+ I KYLRRTK+  LVY
Sbjct: 744  AIGSIMYAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVY 798


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  751 bits (1939), Expect = 0.0
 Identities = 394/770 (51%), Positives = 508/770 (65%), Gaps = 14/770 (1%)
 Frame = +3

Query: 36   CSGTLQDNLYILRPTQSILQLSESNNTSS-NIN-KRKVPSEMNQTLLWHLRLGHINLRRI 209
            CS    D  Y   P  + L +   +  S  NIN KR+ P+ +N T +WH  LGHIN +RI
Sbjct: 358  CSVYYNDIFYFHAPMMNGLYIVNLDGCSVYNINAKRQRPNNLNPTFIWHCCLGHINEKRI 417

Query: 210  QRLVADGPLGSLVVEPLPVCESCLEGKMTNRPFKAKGNRAKEVLELIHSDLCGPMNVQAR 389
            ++L  DG L S   E    CESCL GKMT  PF  +  RA E+L L+H+D+CGPM+  AR
Sbjct: 418  EKLHRDGLLHSFDFESFKTCESCLLGKMTKAPFTGQSERASELLGLVHTDVCGPMSSTAR 477

Query: 390  GGYEYFVTFIDDYSRYGYIYLLHRKSECFDKFKEYKSVTEKRHGKYIKSLRSDRGGEYML 569
            GG+ YF+TF D++SRYGY+YL+  KSE F+KF+E+++  +   GK IK LRSDRGGEY+ 
Sbjct: 478  GGFGYFITFTDEFSRYGYVYLMRHKSESFEKFQEFQNEVQNHLGKTIKYLRSDRGGEYLS 537

Query: 570  GEFRDYLSEHGIESQLSAPGTPQQNGVAERRNRTLLESVRSMMSYSDLPISFWGLALEKA 749
             E+ ++L E GI  QL+ PGTPQ N V+ERRNR LL+ VRSMMS +D+P+SFWG ALE A
Sbjct: 538  LEYGNHLKECGIVPQLTPPGTPQWNAVSERRNRILLDMVRSMMSQTDMPLSFWGYALETA 597

Query: 750  AYLLNLVPSKSVPKTPLELWTGDKPSLRHIRTWGCPAHVLNKNVTKLESRTEVRLLVGYP 929
            A+ LN VPSKSV KTP E+WTG +PSL  ++ W C                         
Sbjct: 598  AFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKIWCC------------------------- 632

Query: 930  KGTKGYLFYSPESRDVIVSTNARFLEEDYIINHKPKSSVVLEQL----EGGNAGPQPVVQ 1097
            + TKGY FY+ E   V V+ +  FLE+++I      S V L+++    E  +   QP V+
Sbjct: 633  EETKGYYFYNREEGKVFVARHGVFLEKEFISRKDSGSMVRLKEIQETPENASTSTQPQVE 692

Query: 1098 EP------QDDAQPDNNTQVPRRSGRVVRQPERFMFL--GESSDLVSDEHEDDPRTYEEA 1253
            +       Q   +P       RRS R+ R P R+  L  G+   L+ D   D+P TYEEA
Sbjct: 693  QDVVQQVEQVVVEPVVEAPASRRSERIRRTPARYALLTSGQRDILLLDN--DEPTTYEEA 750

Query: 1254 LQDIDANKWQKAMKDEMESMYSNHVWELVEPPKGVRPIGCKWIYKRKRGPKGEVKAFKAR 1433
            +   D  KW  AMK E+ESM+ N VW LV+PP GV+ I CKWI+K+     G V  + AR
Sbjct: 751  MVGPDTEKWLGAMKSEIESMHVNQVWNLVDPPDGVKAIECKWIFKKMTDVDGTVHIYNAR 810

Query: 1434 LVAKGYTQKEGIDYEETFSPVAMLKSIRILLSIAAHLNWEIWQMDVKTAFLNGTLEEIIY 1613
            LVAKG+ Q +G+DY+ETFSPVAMLKSIRI+L+IAA+ ++EIWQMDVKTAFLNG L+E +Y
Sbjct: 811  LVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVY 870

Query: 1614 MQQPEGFIKKGQEHLVCKLTKSIYGLKQASKCWNAHFDHVIQTFGFDQCMSEACVYKKGD 1793
            M QP+GF+       +CKL KSIY LKQAS+ WN  FD V++  GF +   E CVYKK  
Sbjct: 871  MTQPKGFVDPQSAKKICKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKIS 930

Query: 1794 GNSVVFLVLYVDDILLIGNNVNMMKDVKAWLFQNFEMKDLGEADYILGIKVKRDRSKRML 1973
            G+++VFL+LYVDDILLIGN++ M++ VK  L  +F MKDLGEA YILGI++ RDRSKR++
Sbjct: 931  GSALVFLILYVDDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLI 990

Query: 1974 ALSQEAYIDTVLARFNMQNFKKGNLPFRHGLVLSKDQCPKTPDQIESMKAVPYASACGSL 2153
             LSQ  YID VL RFNMQ+ KKG LP  HG+ L K+QCP+T D+   M  +PYASA GS+
Sbjct: 991  GLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSI 1050

Query: 2154 MYAM*CTRPDICFAVGMISRYQSNPGQEHWSAVKAILKYLRRTKEYMLVY 2303
            MYAM CTR D+ +A+   SRYQS+ G+ HW AVK ILKYLRRTK+  LVY
Sbjct: 1051 MYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVY 1100


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  751 bits (1939), Expect = 0.0
 Identities = 394/770 (51%), Positives = 508/770 (65%), Gaps = 14/770 (1%)
 Frame = +3

Query: 36   CSGTLQDNLYILRPTQSILQLSESNNTSS-NIN-KRKVPSEMNQTLLWHLRLGHINLRRI 209
            CS    D  Y   P  + L +   +  S  NIN KR+ P+ +N T +WH  LGHIN +RI
Sbjct: 271  CSVYYNDIFYFHAPMMNGLYIVNLDGCSVYNINAKRQRPNNLNPTFIWHCCLGHINEKRI 330

Query: 210  QRLVADGPLGSLVVEPLPVCESCLEGKMTNRPFKAKGNRAKEVLELIHSDLCGPMNVQAR 389
            ++L  DG L S   E    CESCL GKMT  PF  +  RA E+L L+H+D+CGPM+  AR
Sbjct: 331  EKLHRDGLLHSFDFESFKTCESCLLGKMTKAPFTGQSERASELLGLVHTDVCGPMSSTAR 390

Query: 390  GGYEYFVTFIDDYSRYGYIYLLHRKSECFDKFKEYKSVTEKRHGKYIKSLRSDRGGEYML 569
            GG+ YF+TF D++SRYGY+YL+  KSE F+KF+E+++  +   GK IK LRSDRGGEY+ 
Sbjct: 391  GGFGYFITFTDEFSRYGYVYLMRHKSESFEKFQEFQNEVQNHLGKTIKYLRSDRGGEYLS 450

Query: 570  GEFRDYLSEHGIESQLSAPGTPQQNGVAERRNRTLLESVRSMMSYSDLPISFWGLALEKA 749
             E+ ++L E GI  QL+ PGTPQ N V+ERRNR LL+ VRSMMS +D+P+SFWG ALE A
Sbjct: 451  LEYGNHLKECGIVPQLTPPGTPQWNAVSERRNRILLDMVRSMMSQTDMPLSFWGYALETA 510

Query: 750  AYLLNLVPSKSVPKTPLELWTGDKPSLRHIRTWGCPAHVLNKNVTKLESRTEVRLLVGYP 929
            A+ LN VPSKSV KTP E+WTG +PSL  ++ W C                         
Sbjct: 511  AFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKIWCC------------------------- 545

Query: 930  KGTKGYLFYSPESRDVIVSTNARFLEEDYIINHKPKSSVVLEQL----EGGNAGPQPVVQ 1097
            + TKGY FY+ E   V V+ +  FLE+++I      S V L+++    E  +   QP V+
Sbjct: 546  EETKGYYFYNREEGKVFVARHGVFLEKEFISRKDSGSMVRLKEIQETPENASTSTQPQVE 605

Query: 1098 EP------QDDAQPDNNTQVPRRSGRVVRQPERFMFL--GESSDLVSDEHEDDPRTYEEA 1253
            +       Q   +P       RRS R+ R P R+  L  G+   L+ D   D+P TYEEA
Sbjct: 606  QDVVQQVEQVVVEPVVEAPASRRSERIRRTPARYALLTSGQRDILLLDN--DEPTTYEEA 663

Query: 1254 LQDIDANKWQKAMKDEMESMYSNHVWELVEPPKGVRPIGCKWIYKRKRGPKGEVKAFKAR 1433
            +   D  KW  AMK E+ESM+ N VW LV+PP GV+ I CKWI+K+     G V  + AR
Sbjct: 664  MVGPDTEKWLGAMKSEIESMHVNQVWNLVDPPDGVKAIECKWIFKKMTDVDGTVHIYNAR 723

Query: 1434 LVAKGYTQKEGIDYEETFSPVAMLKSIRILLSIAAHLNWEIWQMDVKTAFLNGTLEEIIY 1613
            LVAKG+ Q +G+DY+ETFSPVAMLKSIRI+L+IAA+ ++EIWQMDVKTAFLNG L+E +Y
Sbjct: 724  LVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVY 783

Query: 1614 MQQPEGFIKKGQEHLVCKLTKSIYGLKQASKCWNAHFDHVIQTFGFDQCMSEACVYKKGD 1793
            M QP+GF+       +CKL KSIY LKQAS+ WN  FD V++  GF +   E CVYKK  
Sbjct: 784  MTQPKGFVDPQSAKKICKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKIS 843

Query: 1794 GNSVVFLVLYVDDILLIGNNVNMMKDVKAWLFQNFEMKDLGEADYILGIKVKRDRSKRML 1973
            G+++VFL+LYVDDILLIGN++ M++ VK  L  +F MKDLGEA YILGI++ RDRSKR++
Sbjct: 844  GSALVFLILYVDDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLI 903

Query: 1974 ALSQEAYIDTVLARFNMQNFKKGNLPFRHGLVLSKDQCPKTPDQIESMKAVPYASACGSL 2153
             LSQ  YID VL RFNMQ+ KKG LP  HG+ L K+QCP+T D+   M  +PYASA GS+
Sbjct: 904  GLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSI 963

Query: 2154 MYAM*CTRPDICFAVGMISRYQSNPGQEHWSAVKAILKYLRRTKEYMLVY 2303
            MYAM CTR D+ +A+   SRYQS+ G+ HW AVK ILKYLRRTK+  LVY
Sbjct: 964  MYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVY 1013