BLASTX nr result

ID: Bupleurum21_contig00021080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021080
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    84   9e-15
ref|XP_002533065.1| conserved hypothetical protein [Ricinus comm...    80   1e-13
gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japo...    73   2e-11
gb|EEC71228.1| hypothetical protein OsI_03168 [Oryza sativa Indi...    73   2e-11
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    73   3e-11

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/114 (34%), Positives = 63/114 (55%)
 Frame = +2

Query: 35  MENNKVSSLMTVNQNDWDKEILRDLFYERDQVCIREIKIAEHGERDELYWCRERHGSYSV 214
           +E+  V+ ++ +N+  WD +IL DLF  RD+  I  I +      D  YW  +  G+Y V
Sbjct: 350 LEDATVAGILQINERRWDGDILVDLFNGRDKRLIESIPLTNRNVEDSWYWLFDDKGNYLV 409

Query: 215 RSAYKLLQVQKSYWSLSDNNSFWSKIWRIKAPAKILNLVWRSLSYCLPTIVMLK 376
           ++ Y+LLQ            SFW+K W++K P K+ NL+W+  S C+ T + L+
Sbjct: 410 KNCYRLLQGDLG----RPETSFWNKFWKLKIPTKVRNLMWKICSNCIRTAMNLR 459


>ref|XP_002533065.1| conserved hypothetical protein [Ricinus communis]
           gi|223527129|gb|EEF29304.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/108 (40%), Positives = 62/108 (57%)
 Frame = +2

Query: 50  VSSLMTVNQNDWDKEILRDLFYERDQVCIREIKIAEHGERDELYWCRERHGSYSVRSAYK 229
           VS L      +WD +IL DLF +RD+  I  I ++   E D +YW R+  G++SVR AY+
Sbjct: 97  VSCLFKTGTFEWDNKILDDLFNDRDKRLIHNIVLSHVAELDRVYWHRDVKGNFSVRDAYR 156

Query: 230 LLQVQKSYWSLSDNNSFWSKIWRIKAPAKILNLVWRSLSYCLPTIVML 373
           L Q   S  S S ++  WSK+WR+   +K    +WR+L   LPT V L
Sbjct: 157 LQQHDLSS-SYSGDSVVWSKLWRLNITSKCKIFMWRALLNILPTRVNL 203


>gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japonica Group]
          Length = 1049

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 11/120 (9%)
 Frame = +2

Query: 50   VSSLMTVNQNDWDKEILRDLFYERDQVCIREIKIAEHGERDELYWCRERHGSYSVRSAYK 229
            V  LM   +N WD+EI++ +F +     + ++ I+ HG  D + W  ++ G ++VRSAY 
Sbjct: 683  VDWLMNPERNAWDEEIVKAVFNDDIAREVLQVPISRHGGEDFVSWPHDKRGLFTVRSAYN 742

Query: 230  LLQVQKSYWSLSDN-----------NSFWSKIWRIKAPAKILNLVWRSLSYCLPTIVMLK 376
            L++      + S N           + FW  +W I AP K+L  +WRS+  CLPT   L+
Sbjct: 743  LVRSNLFVVAQSSNGRGQHSGANVDSQFWKALWTINAPGKMLIHLWRSVHDCLPTGFQLR 802


>gb|EEC71228.1| hypothetical protein OsI_03168 [Oryza sativa Indica Group]
          Length = 995

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 11/120 (9%)
 Frame = +2

Query: 50  VSSLMTVNQNDWDKEILRDLFYERDQVCIREIKIAEHGERDELYWCRERHGSYSVRSAYK 229
           V  LM   +N WD+EI++ +F +     + ++ I+ HG  D + W  ++ G ++VRSAY 
Sbjct: 629 VDWLMNPERNAWDEEIVKAVFNDDIAREVLQVPISRHGGEDFVSWPHDKRGLFTVRSAYN 688

Query: 230 LLQVQKSYWSLSDN-----------NSFWSKIWRIKAPAKILNLVWRSLSYCLPTIVMLK 376
           L++      + S N           + FW  +W I AP K+L  +WRS+  CLPT   L+
Sbjct: 689 LVRSNLFVVAQSSNGRGQHSGANVDSQFWKALWTINAPGKMLIHLWRSVHDCLPTGFQLR 748


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
 Frame = +2

Query: 47  KVSSLMTVNQNDWDKEILRDLFYERDQVCIREIKIAEHGERDELYWCRERHGSYSVRSAY 226
           KV  L+T  +  W ++ +RD F  RD   I  I +      D++ W  +  G Y+ RS Y
Sbjct: 428 KVDELIT--EGLWREDFIRDKFMARDADLILSIPLPMSSREDQISWSFDARGEYTARSGY 485

Query: 227 KLLQVQKSYWSLS----DNNSFWSKIWRIKAPAKILNLVWRSLSYCLPT 361
             L+  +   +L     D+N  W+++W++ AP KILN  WR+   CLPT
Sbjct: 486 GALRCFRQSTALVASDVDSNFVWAQLWKVTAPPKILNFAWRAARNCLPT 534


Top