BLASTX nr result

ID: Bupleurum21_contig00021070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021070
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531427.1| conserved hypothetical protein [Ricinus comm...   372   e-113
ref|XP_002304069.1| predicted protein [Populus trichocarpa] gi|2...   372   e-112
ref|XP_002273123.1| PREDICTED: F-box protein At1g10780 [Vitis vi...   369   e-111
emb|CAN82469.1| hypothetical protein VITISV_039785 [Vitis vinifera]   369   e-111
ref|XP_002299669.1| predicted protein [Populus trichocarpa] gi|2...   363   e-110

>ref|XP_002531427.1| conserved hypothetical protein [Ricinus communis]
           gi|223528977|gb|EEF30969.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 419

 Score =  372 bits (956), Expect(2) = e-113
 Identities = 176/242 (72%), Positives = 209/242 (86%)
 Frame = +3

Query: 3   SICQLEELVVYCPFTSVGLASWLLLQGSSIRNLELRMDNLVDQPDCIDSPSKLDCLRVAS 182
           SI +LEELVVY PF+S GLASWLLL GSS+R+LELRMDNL +   CI+SPSKL+C+  A 
Sbjct: 68  SIVRLEELVVYSPFSSTGLASWLLLAGSSLRHLELRMDNLAEYQTCIESPSKLECISAAK 127

Query: 183 NVESLRLWGVLMIKSPNWDSFLRLKSLEIVGARLEDPALADSLRACPNLTHLSLLGCEGL 362
           N+ESL+LWGVLMI SP WD+F +L++LE+VGARLEDPAL  +L+ACPNL +L LLGCEG+
Sbjct: 128 NLESLKLWGVLMINSPKWDNFSKLQNLEVVGARLEDPALCAALQACPNLKNLLLLGCEGV 187

Query: 363 RSVSIELPQLEQCKLDFYGVGNCSLSLISPKLEFLEVQGCGWLRVPETKCLRTLSIANNS 542
           RS+SIEL  LEQCKLDFYG+GNCSL+L  PK+E LEVQGC W+RV ET CLR LSI+NN+
Sbjct: 188 RSISIELLHLEQCKLDFYGLGNCSLTLTCPKMECLEVQGCSWIRVRETNCLRKLSISNNA 247

Query: 543 GKVYRVDFGKLSVLDSLSIRGVQWCWDAISKILQMASEVKHLFMKVEFTGDFDTLLPFPE 722
           G+VY VDFG+L+ L+ LSIRGVQWCWDAISK+LQ ASEVK L+MKVEFTGDFD LLPFPE
Sbjct: 248 GRVYMVDFGRLAALEFLSIRGVQWCWDAISKMLQWASEVKQLYMKVEFTGDFDALLPFPE 307

Query: 723 ID 728
           +D
Sbjct: 308 VD 309



 Score = 62.8 bits (151), Expect(2) = e-113
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = +2

Query: 731 VEFFNNHQKLHRFDIHGAMFAALCQKNSLKHV 826
           VEFFN+HQKL +FD+HGAMFAALCQKNSLK+V
Sbjct: 311 VEFFNSHQKLQKFDVHGAMFAALCQKNSLKNV 342


>ref|XP_002304069.1| predicted protein [Populus trichocarpa] gi|222841501|gb|EEE79048.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  372 bits (955), Expect(2) = e-112
 Identities = 175/242 (72%), Positives = 212/242 (87%)
 Frame = +3

Query: 3   SICQLEELVVYCPFTSVGLASWLLLQGSSIRNLELRMDNLVDQPDCIDSPSKLDCLRVAS 182
           S+ +LEELVVY PF+S+GLASW+LL GSS+++LELRMDNL +  +C +SPSKL+C+  A 
Sbjct: 68  SVVKLEELVVYSPFSSIGLASWMLLVGSSLKHLELRMDNLAEYQNCTESPSKLECISTAK 127

Query: 183 NVESLRLWGVLMIKSPNWDSFLRLKSLEIVGARLEDPALADSLRACPNLTHLSLLGCEGL 362
           N+ESL+LWGVLM+ SP WD+F +L+SLEIVGA+LEDPAL  +L+ACPNL +L LLGCEG+
Sbjct: 128 NLESLKLWGVLMMNSPKWDAFPKLQSLEIVGAKLEDPALTAALQACPNLKNLLLLGCEGV 187

Query: 363 RSVSIELPQLEQCKLDFYGVGNCSLSLISPKLEFLEVQGCGWLRVPETKCLRTLSIANNS 542
           RSV IELP LEQCKLDFYGVGN SL+L SPK+EFLEVQGC W+ V ET CLR+LSI+NN+
Sbjct: 188 RSVLIELPSLEQCKLDFYGVGNYSLTLTSPKIEFLEVQGCSWISVRETACLRSLSISNNA 247

Query: 543 GKVYRVDFGKLSVLDSLSIRGVQWCWDAISKILQMASEVKHLFMKVEFTGDFDTLLPFPE 722
           G+VY VDFGKL+ L+ LSIRGVQWCW+AISK+LQ+ASEVKHL+MKVEFTGDFD L PFPE
Sbjct: 248 GRVYMVDFGKLAALEFLSIRGVQWCWNAISKMLQLASEVKHLYMKVEFTGDFDNLQPFPE 307

Query: 723 ID 728
           ID
Sbjct: 308 ID 309



 Score = 59.7 bits (143), Expect(2) = e-112
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = +2

Query: 731 VEFFNNHQKLHRFDIHGAMFAALCQKNSLKHV 826
           V+FFN+H KL +FDIHGAMFAALCQKNSLK+V
Sbjct: 311 VDFFNSHPKLQKFDIHGAMFAALCQKNSLKNV 342


>ref|XP_002273123.1| PREDICTED: F-box protein At1g10780 [Vitis vinifera]
          Length = 422

 Score =  369 bits (946), Expect(2) = e-111
 Identities = 179/245 (73%), Positives = 208/245 (84%), Gaps = 3/245 (1%)
 Frame = +3

Query: 3   SICQLEELVVYCPFTSVGLASWLLLQGSSIRNLELRMDNLVDQP---DCIDSPSKLDCLR 173
           SI +LE+LVVYCPF+S GLASWL   GSS+R+LELRMDN+ + P   +    PSKLDC+ 
Sbjct: 68  SIVKLEQLVVYCPFSSAGLASWLSYAGSSLRHLELRMDNIAEHPIGFEDSSKPSKLDCIA 127

Query: 174 VASNVESLRLWGVLMIKSPNWDSFLRLKSLEIVGARLEDPALADSLRACPNLTHLSLLGC 353
            A N+ESL+LWGVLM   P WD F  L++LEIVGARLEDPAL+++L+ACPNLTHL LLGC
Sbjct: 128 YARNLESLKLWGVLMTHPPKWDFFQSLRNLEIVGARLEDPALSNALQACPNLTHLLLLGC 187

Query: 354 EGLRSVSIELPQLEQCKLDFYGVGNCSLSLISPKLEFLEVQGCGWLRVPETKCLRTLSIA 533
           EG+RSVSIELP LEQCKLDFYG GNCSLS+ISPKLE LEVQGC W+RV ET+ LR LSIA
Sbjct: 188 EGVRSVSIELPHLEQCKLDFYGWGNCSLSVISPKLELLEVQGCSWIRVRETQYLRNLSIA 247

Query: 534 NNSGKVYRVDFGKLSVLDSLSIRGVQWCWDAISKILQMASEVKHLFMKVEFTGDFDTLLP 713
           NN+G+VY VDFGKL+ L+ LSIRGVQWCWDAISK+LQ AS+VKHL+MKVEFTGDF+ LLP
Sbjct: 248 NNAGRVYMVDFGKLASLEFLSIRGVQWCWDAISKMLQWASDVKHLYMKVEFTGDFEALLP 307

Query: 714 FPEID 728
           FPEID
Sbjct: 308 FPEID 312



 Score = 59.7 bits (143), Expect(2) = e-111
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = +2

Query: 731 VEFFNNHQKLHRFDIHGAMFAALCQKNSLKHV 826
           V+FFN+H KL +FDIHGAMFAALCQKNSLK+V
Sbjct: 314 VDFFNSHPKLQKFDIHGAMFAALCQKNSLKNV 345


>emb|CAN82469.1| hypothetical protein VITISV_039785 [Vitis vinifera]
          Length = 405

 Score =  369 bits (946), Expect(2) = e-111
 Identities = 179/245 (73%), Positives = 208/245 (84%), Gaps = 3/245 (1%)
 Frame = +3

Query: 3   SICQLEELVVYCPFTSVGLASWLLLQGSSIRNLELRMDNLVDQP---DCIDSPSKLDCLR 173
           SI +LE+LVVYCPF+S GLASWL   GSS+R+LELRMDN+ + P   +    PSKLDC+ 
Sbjct: 51  SIVKLEQLVVYCPFSSAGLASWLSYAGSSLRHLELRMDNIAEHPIGFEDSSKPSKLDCIA 110

Query: 174 VASNVESLRLWGVLMIKSPNWDSFLRLKSLEIVGARLEDPALADSLRACPNLTHLSLLGC 353
            A N+ESL+LWGVLM   P WD F  L++LEIVGARLEDPAL+++L+ACPNLTHL LLGC
Sbjct: 111 YARNLESLKLWGVLMTHPPKWDFFQSLRNLEIVGARLEDPALSNALQACPNLTHLLLLGC 170

Query: 354 EGLRSVSIELPQLEQCKLDFYGVGNCSLSLISPKLEFLEVQGCGWLRVPETKCLRTLSIA 533
           EG+RSVSIELP LEQCKLDFYG GNCSLS+ISPKLE LEVQGC W+RV ET+ LR LSIA
Sbjct: 171 EGVRSVSIELPHLEQCKLDFYGWGNCSLSVISPKLELLEVQGCSWIRVRETQYLRNLSIA 230

Query: 534 NNSGKVYRVDFGKLSVLDSLSIRGVQWCWDAISKILQMASEVKHLFMKVEFTGDFDTLLP 713
           NN+G+VY VDFGKL+ L+ LSIRGVQWCWDAISK+LQ AS+VKHL+MKVEFTGDF+ LLP
Sbjct: 231 NNAGRVYMVDFGKLASLEFLSIRGVQWCWDAISKMLQWASDVKHLYMKVEFTGDFEALLP 290

Query: 714 FPEID 728
           FPEID
Sbjct: 291 FPEID 295



 Score = 59.7 bits (143), Expect(2) = e-111
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = +2

Query: 731 VEFFNNHQKLHRFDIHGAMFAALCQKNSLKHV 826
           V+FFN+H KL +FDIHGAMFAALCQKNSLK+V
Sbjct: 297 VDFFNSHPKLQKFDIHGAMFAALCQKNSLKNV 328


>ref|XP_002299669.1| predicted protein [Populus trichocarpa] gi|222846927|gb|EEE84474.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  363 bits (933), Expect(2) = e-110
 Identities = 175/242 (72%), Positives = 207/242 (85%)
 Frame = +3

Query: 3   SICQLEELVVYCPFTSVGLASWLLLQGSSIRNLELRMDNLVDQPDCIDSPSKLDCLRVAS 182
           SI +LEELVVY PF+S GLASWLLL  SS+++LELR+DNL +   CI+SPSKLDC+  A 
Sbjct: 68  SIVKLEELVVYSPFSSTGLASWLLLVSSSLKHLELRLDNLAEYQSCIESPSKLDCISAAK 127

Query: 183 NVESLRLWGVLMIKSPNWDSFLRLKSLEIVGARLEDPALADSLRACPNLTHLSLLGCEGL 362
           N+ESL+LWGVLM+KSP WD+F +L+SLEIVGARLEDPAL  +L+ACPNL +L LLGCEG+
Sbjct: 128 NLESLKLWGVLMVKSPKWDAFPKLQSLEIVGARLEDPALTAALQACPNLKNLLLLGCEGV 187

Query: 363 RSVSIELPQLEQCKLDFYGVGNCSLSLISPKLEFLEVQGCGWLRVPETKCLRTLSIANNS 542
           RSVS+EL  LEQCKLDFYG GN SL+L SPK+EFLEVQGC W+ V ET  LR LSI+NN+
Sbjct: 188 RSVSLELLNLEQCKLDFYGGGNYSLTLTSPKIEFLEVQGCSWISVRETTRLRNLSISNNA 247

Query: 543 GKVYRVDFGKLSVLDSLSIRGVQWCWDAISKILQMASEVKHLFMKVEFTGDFDTLLPFPE 722
           G+VY VDFGKL+ L+ LSIRGVQWCW+AISK+L +ASEVKHL+MKVEFTGDFD L PFPE
Sbjct: 248 GRVYMVDFGKLAALEFLSIRGVQWCWNAISKMLHLASEVKHLYMKVEFTGDFDNLQPFPE 307

Query: 723 ID 728
           ID
Sbjct: 308 ID 309



 Score = 61.2 bits (147), Expect(2) = e-110
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +2

Query: 728 LVEFFNNHQKLHRFDIHGAMFAALCQKNSLKHV 826
           LV+FFN+H KL +FDIHGAMFAALCQKNSLK+V
Sbjct: 310 LVDFFNSHPKLQKFDIHGAMFAALCQKNSLKNV 342


Top