BLASTX nr result

ID: Bupleurum21_contig00021066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021066
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271102.1| PREDICTED: GRAM domain-containing protein 1A...   255   3e-66
ref|XP_003535199.1| PREDICTED: GRAM domain-containing protein 1A...   245   4e-63
ref|XP_003556873.1| PREDICTED: uncharacterized protein LOC100819...   241   4e-62
gb|ACU01863.1| vascular associated death 1 [Glycine max]              241   4e-62
ref|NP_171714.2| GRAM domain family protein [Arabidopsis thalian...   226   2e-57

>ref|XP_002271102.1| PREDICTED: GRAM domain-containing protein 1A [Vitis vinifera]
           gi|297734616|emb|CBI16667.3| unnamed protein product
           [Vitis vinifera]
          Length = 639

 Score =  255 bits (652), Expect = 3e-66
 Identities = 116/182 (63%), Positives = 145/182 (79%), Gaps = 4/182 (2%)
 Frame = +2

Query: 2   PKVPECYTLVAEAKFPLKXXXXXXXXXXXXALGFLESYHKKCGDKELRCSPWRPHEKYGY 181
           PKVPE Y+ VAEAKFP+K            A+ F+ES+HK+CGDKE RC+ W PH+K+G+
Sbjct: 275 PKVPEYYSNVAEAKFPIKVEEFFTFFFSDDAVDFIESFHKRCGDKEFRCTSWSPHDKFGH 334

Query: 182 VRDISFKHPIKIYLGARYGSPRAIQKLRLYRNSHLIIETTQEISDVPYGDYFCVEVLWDV 361
            RD SF+HPIK+Y GA++GS R  QK R+Y+NSHLIIET+QE++DVPYGDYF VE LW+V
Sbjct: 335 ARDKSFQHPIKLYFGAKFGSCREAQKFRVYKNSHLIIETSQEVNDVPYGDYFTVEGLWNV 394

Query: 362 ERNGD----GCTLRIYVNVVFSKNTMWKGKIIQSTIDECRDAYAIWIAHAHDLLKQMNLE 529
           E +GD    GC LR+YVNV FSK TMWKGKI+QST++ECR+AYAIWI+ AH+LLKQ NLE
Sbjct: 395 ESDGDESNGGCILRVYVNVAFSKKTMWKGKIVQSTVEECREAYAIWISLAHELLKQKNLE 454

Query: 530 KE 535
           K+
Sbjct: 455 KQ 456


>ref|XP_003535199.1| PREDICTED: GRAM domain-containing protein 1A-like [Glycine max]
          Length = 633

 Score =  245 bits (625), Expect = 4e-63
 Identities = 114/183 (62%), Positives = 139/183 (75%), Gaps = 4/183 (2%)
 Frame = +2

Query: 8   VPECYTLVAEAKFPLKXXXXXXXXXXXXALGFLESYHKKCGDKELRCSPWRPHEKYGYVR 187
           V E YT VA++ FP+K            AL FLES+ +KCGDK+ RCSPW P EK+GY R
Sbjct: 284 VLEAYTCVADSVFPMKVEDFFRYLFSDDALNFLESFRQKCGDKDFRCSPWHPQEKFGYAR 343

Query: 188 DISFKHPIKIYLGARYGSPRAIQKLRLYRNSHLIIETTQEISDVPYGDYFCVEVLWDVER 367
           ++SF+HPIKIYLGA++G    +QK R+YRNSHL+IET+QE+SDVPY DYF VE LW VER
Sbjct: 344 ELSFQHPIKIYLGAKFGGCHEVQKFRVYRNSHLVIETSQEVSDVPYADYFRVEGLWSVER 403

Query: 368 NGDG----CTLRIYVNVVFSKNTMWKGKIIQSTIDECRDAYAIWIAHAHDLLKQMNLEKE 535
           + D     CTLR+YVNV FSK T+WKGKIIQSTI+ECRDAYA WI  AH++LKQ NLEK+
Sbjct: 404 DKDESKECCTLRVYVNVAFSKKTIWKGKIIQSTIEECRDAYATWINMAHEMLKQKNLEKQ 463

Query: 536 GRN 544
            +N
Sbjct: 464 AQN 466


>ref|XP_003556873.1| PREDICTED: uncharacterized protein LOC100819859 [Glycine max]
          Length = 803

 Score =  241 bits (616), Expect = 4e-62
 Identities = 112/185 (60%), Positives = 138/185 (74%), Gaps = 4/185 (2%)
 Frame = +2

Query: 2    PKVPECYTLVAEAKFPLKXXXXXXXXXXXXALGFLESYHKKCGDKELRCSPWRPHEKYGY 181
            P + E YT VA++ FP+K            AL FLES+ +KCGDK+ RCS W P EK+GY
Sbjct: 451  PSILEAYTCVADSVFPIKVEDFFRYLFSDDALNFLESFRQKCGDKDFRCSSWHPQEKFGY 510

Query: 182  VRDISFKHPIKIYLGARYGSPRAIQKLRLYRNSHLIIETTQEISDVPYGDYFCVEVLWDV 361
             R++SF+HPIKIYLGA++G    +QK R+YRNSHL+IET+QE+SDVPY DYF VE LW V
Sbjct: 511  ARELSFQHPIKIYLGAKFGGCHEVQKFRVYRNSHLVIETSQEVSDVPYADYFRVEGLWSV 570

Query: 362  ERNGDG----CTLRIYVNVVFSKNTMWKGKIIQSTIDECRDAYAIWIAHAHDLLKQMNLE 529
            ER+ D     C LR+YVNV FSK T+WKGKIIQSTI+ECRDAYA WI  AH++LKQ NLE
Sbjct: 571  ERDKDESKECCFLRVYVNVAFSKKTIWKGKIIQSTIEECRDAYATWINMAHEMLKQKNLE 630

Query: 530  KEGRN 544
            K+ +N
Sbjct: 631  KQAQN 635


>gb|ACU01863.1| vascular associated death 1 [Glycine max]
          Length = 618

 Score =  241 bits (616), Expect = 4e-62
 Identities = 112/185 (60%), Positives = 138/185 (74%), Gaps = 4/185 (2%)
 Frame = +2

Query: 2   PKVPECYTLVAEAKFPLKXXXXXXXXXXXXALGFLESYHKKCGDKELRCSPWRPHEKYGY 181
           P + E YT VA++ FP+K            AL FLES+ +KCGDK+ RCS W P EK+GY
Sbjct: 266 PSILEAYTCVADSVFPIKVEDFFRYLFSDDALNFLESFRQKCGDKDFRCSSWHPQEKFGY 325

Query: 182 VRDISFKHPIKIYLGARYGSPRAIQKLRLYRNSHLIIETTQEISDVPYGDYFCVEVLWDV 361
            R++SF+HPIKIYLGA++G    +QK R+YRNSHL+IET+QE+SDVPY DYF VE LW V
Sbjct: 326 ARELSFQHPIKIYLGAKFGGCHEVQKFRVYRNSHLVIETSQEVSDVPYADYFRVEGLWSV 385

Query: 362 ERNGDG----CTLRIYVNVVFSKNTMWKGKIIQSTIDECRDAYAIWIAHAHDLLKQMNLE 529
           ER+ D     C LR+YVNV FSK T+WKGKIIQSTI+ECRDAYA WI  AH++LKQ NLE
Sbjct: 386 ERDKDESKECCFLRVYVNVAFSKKTIWKGKIIQSTIEECRDAYATWINMAHEMLKQKNLE 445

Query: 530 KEGRN 544
           K+ +N
Sbjct: 446 KQAQN 450


>ref|NP_171714.2| GRAM domain family protein [Arabidopsis thaliana]
           gi|332189265|gb|AEE27386.1| GRAM domain family protein
           [Arabidopsis thaliana]
          Length = 598

 Score =  226 bits (575), Expect = 2e-57
 Identities = 104/185 (56%), Positives = 135/185 (72%), Gaps = 4/185 (2%)
 Frame = +2

Query: 2   PKVPECYTLVAEAKFPLKXXXXXXXXXXXXALGFLESYHKKCGDKELRCSPWRPHEKYGY 181
           PK+   +T VAEAKF +             A+ F+ES+HK CGDKE RC+ W+PHEK G+
Sbjct: 267 PKLSSDFTKVAEAKFSIPVEEFFRLFFSDGAVSFVESFHKNCGDKEFRCTSWQPHEKLGH 326

Query: 182 VRDISFKHPIKIYLGARYGSPRAIQKLRLYRNSHLIIETTQEISDVPYGDYFCVEVLWDV 361
            R++SF+HPIKIY GA++G  +  QK R+YRNSHL+IET+QEISDVPY DYF VE +WD+
Sbjct: 327 TRNVSFQHPIKIYFGAKFGGCQESQKFRMYRNSHLVIETSQEISDVPYADYFTVEGVWDL 386

Query: 362 ER----NGDGCTLRIYVNVVFSKNTMWKGKIIQSTIDECRDAYAIWIAHAHDLLKQMNLE 529
           +R    + +GC L +YVNV FSK T+WKGKI+QST++ECR+AYA WI  AH+LLKQ  LE
Sbjct: 387 KRDCRDSVEGCILDVYVNVAFSKRTVWKGKIVQSTLEECREAYAHWIRMAHELLKQKKLE 446

Query: 530 KEGRN 544
            +  N
Sbjct: 447 NQEGN 451


Top