BLASTX nr result

ID: Bupleurum21_contig00021063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021063
         (982 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80513.1| hypothetical protein VITISV_026067 [Vitis vinifera]   328   9e-88
ref|XP_002268594.2| PREDICTED: ATP-dependent Clp protease ATP-bi...   326   5e-87
emb|CBI29632.3| unnamed protein product [Vitis vinifera]              326   5e-87
emb|CBI16961.3| unnamed protein product [Vitis vinifera]              322   9e-86
emb|CAN64542.1| hypothetical protein VITISV_013764 [Vitis vinifera]   322   9e-86

>emb|CAN80513.1| hypothetical protein VITISV_026067 [Vitis vinifera]
          Length = 469

 Score =  328 bits (842), Expect = 9e-88
 Identities = 169/244 (69%), Positives = 197/244 (80%), Gaps = 2/244 (0%)
 Frame = -1

Query: 982 PDTRARKHPRGDTIQIDTKDILFICGGAFIDLEKTISERREESSIGFGASIRANMRVAGL 803
           PD   RKHPRGD IQIDTKDILFICGGAF+DLEKTISERR++SSIGFGA +RANMR  GL
Sbjct: 225 PDKGGRKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRTGGL 284

Query: 802 TNAVVTSSLLETVETGDLIAYGLIPEFIGRFPVLVSLSALDEDQLVQVLTEPKNALCRQY 623
           T+AVVTSSLLE+VE+GDLIAYGLIPEFIGRFP+LVSLSAL+EDQLVQVLTEPKNAL +QY
Sbjct: 285 TDAVVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGKQY 344

Query: 622 RKLFSMNNVKLHFTDTXXXXXXXXXXXKNTGARGLRGILESILAEAMFEIPDVKSAENRI 443
           +K+ SMNNVKLHFT+            KNTGAR LR ILE IL EAMFEIPDVK+  + +
Sbjct: 345 KKMLSMNNVKLHFTENALRLIAKKAIAKNTGARSLRAILEKILTEAMFEIPDVKTGTDMV 404

Query: 442 DGVVVDEEAIRSADKSGCGAKILYGDHALEQFLQQRKPENEMG--EAAKDVSEVEQEVPI 269
           D V+VDEEA+ S ++ GCGAK+L G+ ALEQFL + K  N +G  E A+++ + E EV  
Sbjct: 405 DAVLVDEEAVESIEEQGCGAKVLRGEGALEQFLHETKSSNPLGRDEMAQELLQREMEVSS 464

Query: 268 RAMS 257
           RAMS
Sbjct: 465 RAMS 468


>ref|XP_002268594.2| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
            [Vitis vinifera]
          Length = 637

 Score =  326 bits (836), Expect = 5e-87
 Identities = 168/244 (68%), Positives = 196/244 (80%), Gaps = 2/244 (0%)
 Frame = -1

Query: 982  PDTRARKHPRGDTIQIDTKDILFICGGAFIDLEKTISERREESSIGFGASIRANMRVAGL 803
            PD   RKHPRGD IQIDTKDILFICGGAF+DLEKTISERR++SSIGFGA +RANMR  GL
Sbjct: 393  PDKGGRKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRTGGL 452

Query: 802  TNAVVTSSLLETVETGDLIAYGLIPEFIGRFPVLVSLSALDEDQLVQVLTEPKNALCRQY 623
            T+AVVTSSLLE+VE+GDLIAYGLIPEFIGRFP+LVSLSAL+EDQLVQVLTEPKNAL +QY
Sbjct: 453  TDAVVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGKQY 512

Query: 622  RKLFSMNNVKLHFTDTXXXXXXXXXXXKNTGARGLRGILESILAEAMFEIPDVKSAENRI 443
            +K+ SMNNVKLHFT+            KNTGAR LR ILE IL EAMFEIPDVK+  + +
Sbjct: 513  KKMLSMNNVKLHFTENALRLIAKKAIAKNTGARSLRAILEKILTEAMFEIPDVKTGTDMV 572

Query: 442  DGVVVDEEAIRSADKSGCGAKILYGDHALEQFLQQRKPENEMG--EAAKDVSEVEQEVPI 269
            D V+VDEEA+ S ++ GCGAK+L G+ ALEQFL + K  N +G  E A+++   E EV  
Sbjct: 573  DAVLVDEEAVESIEEQGCGAKVLRGEGALEQFLHETKSSNPLGRDEMAQELLPREMEVSS 632

Query: 268  RAMS 257
            RA+S
Sbjct: 633  RALS 636


>emb|CBI29632.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score =  326 bits (836), Expect = 5e-87
 Identities = 168/244 (68%), Positives = 196/244 (80%), Gaps = 2/244 (0%)
 Frame = -1

Query: 982  PDTRARKHPRGDTIQIDTKDILFICGGAFIDLEKTISERREESSIGFGASIRANMRVAGL 803
            PD   RKHPRGD IQIDTKDILFICGGAF+DLEKTISERR++SSIGFGA +RANMR  GL
Sbjct: 301  PDKGGRKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRTGGL 360

Query: 802  TNAVVTSSLLETVETGDLIAYGLIPEFIGRFPVLVSLSALDEDQLVQVLTEPKNALCRQY 623
            T+AVVTSSLLE+VE+GDLIAYGLIPEFIGRFP+LVSLSAL+EDQLVQVLTEPKNAL +QY
Sbjct: 361  TDAVVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGKQY 420

Query: 622  RKLFSMNNVKLHFTDTXXXXXXXXXXXKNTGARGLRGILESILAEAMFEIPDVKSAENRI 443
            +K+ SMNNVKLHFT+            KNTGAR LR ILE IL EAMFEIPDVK+  + +
Sbjct: 421  KKMLSMNNVKLHFTENALRLIAKKAIAKNTGARSLRAILEKILTEAMFEIPDVKTGTDMV 480

Query: 442  DGVVVDEEAIRSADKSGCGAKILYGDHALEQFLQQRKPENEMG--EAAKDVSEVEQEVPI 269
            D V+VDEEA+ S ++ GCGAK+L G+ ALEQFL + K  N +G  E A+++   E EV  
Sbjct: 481  DAVLVDEEAVESIEEQGCGAKVLRGEGALEQFLHETKSSNPLGRDEMAQELLPREMEVSS 540

Query: 268  RAMS 257
            RA+S
Sbjct: 541  RALS 544


>emb|CBI16961.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  322 bits (825), Expect = 9e-86
 Identities = 169/247 (68%), Positives = 197/247 (79%), Gaps = 4/247 (1%)
 Frame = -1

Query: 982  PDTRARKHPRGDTIQIDTKDILFICGGAFIDLEKTISERREESSIGFGASIRANMRVAGL 803
            P+  ARKHPRGD IQIDTKDILFICGGAF+DLEKTIS+RR++SSIGFGA +RANMR  GL
Sbjct: 316  PEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRTGGL 375

Query: 802  TNAVVTSSLLETVETGDLIAYGLIPEFIGRFPVLVSLSALDEDQLVQVLTEPKNALCRQY 623
            TNAVVTSSLLE+VE+ DLIAYGLIPEFIGRFP+LVSLSAL EDQLV+VLTEPKNAL +QY
Sbjct: 376  TNAVVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLVKVLTEPKNALGKQY 435

Query: 622  RKLFSMNNVKLHFTDTXXXXXXXXXXXKNTGARGLRGILESILAEAMFEIPDVKSAENRI 443
            +KLFSMNNVKLHFT+            KNTGARGLR +LESIL EAM+EIPDVK+ ++R+
Sbjct: 436  KKLFSMNNVKLHFTEKALRQIAKKAMVKNTGARGLRALLESILTEAMYEIPDVKTGKDRV 495

Query: 442  DGVVVDEEAIRSADKSGCGAKILYGDHALEQFLQQRK---PENEMGEAAK-DVSEVEQEV 275
            D VVVDEE++ S +  GCG KIL GD AL+ +L + K   P    GEA   ++ E E EV
Sbjct: 496  DAVVVDEESVGSVNAPGCGGKILRGDGALDCYLAETKLKDPVESGGEAGDGELQEAESEV 555

Query: 274  PIRAMSL 254
              RAMS+
Sbjct: 556  SSRAMSM 562


>emb|CAN64542.1| hypothetical protein VITISV_013764 [Vitis vinifera]
          Length = 730

 Score =  322 bits (825), Expect = 9e-86
 Identities = 169/247 (68%), Positives = 197/247 (79%), Gaps = 4/247 (1%)
 Frame = -1

Query: 982  PDTRARKHPRGDTIQIDTKDILFICGGAFIDLEKTISERREESSIGFGASIRANMRVAGL 803
            P+  ARKHPRGD IQIDTKDILFICGGAF+DLEKTIS+RR++SSIGFGA +RANMR  GL
Sbjct: 484  PEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRTGGL 543

Query: 802  TNAVVTSSLLETVETGDLIAYGLIPEFIGRFPVLVSLSALDEDQLVQVLTEPKNALCRQY 623
            TNAVVTSSLLE+VE+ DLIAYGLIPEFIGRFP+LVSLSAL EDQLV+VLTEPKNAL +QY
Sbjct: 544  TNAVVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLVKVLTEPKNALGKQY 603

Query: 622  RKLFSMNNVKLHFTDTXXXXXXXXXXXKNTGARGLRGILESILAEAMFEIPDVKSAENRI 443
            +KLFSMNNVKLHFT+            KNTGARGLR +LESIL EAM+EIPDVK+ ++R+
Sbjct: 604  KKLFSMNNVKLHFTEKALRQIAKKAMVKNTGARGLRALLESILTEAMYEIPDVKTGKDRV 663

Query: 442  DGVVVDEEAIRSADKSGCGAKILYGDHALEQFLQQRK---PENEMGEAAK-DVSEVEQEV 275
            D VVVDEE++ S +  GCG KIL GD AL+ +L + K   P    GEA   ++ E E EV
Sbjct: 664  DAVVVDEESVGSVNAPGCGGKILRGDGALDCYLAETKLKDPVESGGEAGDGELQEAESEV 723

Query: 274  PIRAMSL 254
              RAMS+
Sbjct: 724  SSRAMSM 730


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