BLASTX nr result

ID: Bupleurum21_contig00021049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021049
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   166   1e-39
gb|AEI98633.1| hypothetical protein 111O18.20 [Coffea canephora]      165   3e-39
ref|XP_003537581.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   165   4e-39
ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW...   162   3e-38
ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   159   2e-37

>ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
          Length = 943

 Score =  166 bits (421), Expect = 1e-39
 Identities = 86/123 (69%), Positives = 101/123 (82%), Gaps = 1/123 (0%)
 Frame = -3

Query: 368  KPVHVYRLATAQSVEGRILKRAYNKLKLEHVVIVKGQFMQEKAKVDTAD-VDETDLLALL 192
            KPVHVYRL+TAQS+EGR+LKRA++KLKLEHVVI KGQF QE+ K  + D ++E D+LALL
Sbjct: 814  KPVHVYRLSTAQSIEGRMLKRAFSKLKLEHVVIEKGQFHQERTKPASMDEIEEDDVLALL 873

Query: 191  RDDETEEDKMIQTDISDEDLEKLLDRSDLLAADNESEDGKPRYSTSVLPLKGPGWEVVVP 12
            RD+ET EDKMI TDISDEDLEKLLDRSDL+   N+  D   +   SV PLKGPGWEVV+P
Sbjct: 874  RDEETAEDKMIHTDISDEDLEKLLDRSDLIV--NDFNDDNFKAPVSVFPLKGPGWEVVIP 931

Query: 11   TAT 3
            TAT
Sbjct: 932  TAT 934


>gb|AEI98633.1| hypothetical protein 111O18.20 [Coffea canephora]
          Length = 744

 Score =  165 bits (418), Expect = 3e-39
 Identities = 85/122 (69%), Positives = 105/122 (86%), Gaps = 1/122 (0%)
 Frame = -3

Query: 368 KPVHVYRLATAQSVEGRILKRAYNKLKLEHVVIVKGQFMQEKAKVDTAD-VDETDLLALL 192
           KPVHVYRLATAQSVEGR+LKRA++KLKLEHVVI KGQF QE+ K ++ + V+E DLLALL
Sbjct: 614 KPVHVYRLATAQSVEGRMLKRAFSKLKLEHVVIGKGQFKQERTKPNSMEAVEEEDLLALL 673

Query: 191 RDDETEEDKMIQTDISDEDLEKLLDRSDLLAADNESEDGKPRYSTSVLPLKGPGWEVVVP 12
           RD+ T E+K IQTDIS++DLE++LDRSDL+A  +E +DGK    ++VLPLKGPGWEVV+P
Sbjct: 674 RDEGTAEEKWIQTDISEDDLERVLDRSDLVAVSSE-QDGKTGSDSTVLPLKGPGWEVVIP 732

Query: 11  TA 6
           TA
Sbjct: 733 TA 734


>ref|XP_003537581.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
          Length = 757

 Score =  165 bits (417), Expect = 4e-39
 Identities = 85/123 (69%), Positives = 100/123 (81%), Gaps = 1/123 (0%)
 Frame = -3

Query: 368 KPVHVYRLATAQSVEGRILKRAYNKLKLEHVVIVKGQFMQEKAKVDTAD-VDETDLLALL 192
           KPVHVYRL+TAQS+EGR+LKRA++KLKLEHVVI KGQF QE+ K  + D ++E D+LALL
Sbjct: 628 KPVHVYRLSTAQSIEGRMLKRAFSKLKLEHVVIEKGQFHQERTKPASMDEIEEDDVLALL 687

Query: 191 RDDETEEDKMIQTDISDEDLEKLLDRSDLLAADNESEDGKPRYSTSVLPLKGPGWEVVVP 12
           RD+ET EDK I TDISDEDLEKLLDRSDL+   N+S D   +   S  PLKGPGWEVV+P
Sbjct: 688 RDEETAEDKKIHTDISDEDLEKLLDRSDLIV--NDSNDDNFKAPVSAFPLKGPGWEVVIP 745

Query: 11  TAT 3
           TAT
Sbjct: 746 TAT 748


>ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW1, putative [Ricinus
            communis] gi|223539284|gb|EEF40877.1| ISWI chromatin
            remodeling complex ATPase ISW1, putative [Ricinus
            communis]
          Length = 788

 Score =  162 bits (410), Expect = 3e-38
 Identities = 84/123 (68%), Positives = 103/123 (83%), Gaps = 1/123 (0%)
 Frame = -3

Query: 368  KPVHVYRLATAQSVEGRILKRAYNKLKLEHVVIVKGQFMQEKAKVDT-ADVDETDLLALL 192
            KPVHVYRLATAQSVEGRILKRA++KLKLEHVVI KGQF QE+ K ++  D++E D+LALL
Sbjct: 659  KPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERMKSNSIVDMEEEDILALL 718

Query: 191  RDDETEEDKMIQTDISDEDLEKLLDRSDLLAADNESEDGKPRYSTSVLPLKGPGWEVVVP 12
            R++ET EDK+IQTDISDEDLE++LDRSDL+   N ++D +       +PLKGPGWEVV+P
Sbjct: 719  RNEETAEDKLIQTDISDEDLERILDRSDLVG--NLADDKENDAVMDAIPLKGPGWEVVIP 776

Query: 11   TAT 3
            TAT
Sbjct: 777  TAT 779


>ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 828

 Score =  159 bits (403), Expect = 2e-37
 Identities = 81/123 (65%), Positives = 102/123 (82%), Gaps = 1/123 (0%)
 Frame = -3

Query: 368  KPVHVYRLATAQSVEGRILKRAYNKLKLEHVVIVKGQFMQEKAKVDTAD-VDETDLLALL 192
            KPVHVYRLATAQS+EGRILKRA++KLKLEHVVI KGQF QE+ K   AD V+E D+LALL
Sbjct: 698  KPVHVYRLATAQSIEGRILKRAFSKLKLEHVVIEKGQFHQERTKPTAADIVEEEDILALL 757

Query: 191  RDDETEEDKMIQTDISDEDLEKLLDRSDLLAADNESEDGKPRYSTSVLPLKGPGWEVVVP 12
            R++++ EDKMIQT+ISD DLE++LDRSDL+     S++ K + S ++ PLKGPGWEVV+P
Sbjct: 758  REEDSAEDKMIQTEISDADLERILDRSDLIVPTG-SDNEKSKVSGNLYPLKGPGWEVVIP 816

Query: 11   TAT 3
             +T
Sbjct: 817  AST 819


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