BLASTX nr result

ID: Bupleurum21_contig00021037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021037
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278293.1| PREDICTED: uncharacterized protein At5g12080...    59   4e-07
ref|XP_002514064.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_002278293.1| PREDICTED: uncharacterized protein At5g12080-like [Vitis vinifera]
          Length = 772

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 59/156 (37%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
 Frame = +2

Query: 2   GTSGKK--DDDEVLVTIMGGEQISRSQNENDICNSLENLPSGSYSFSKYLPEDTTFVSEL 175
           G + KK   ++EV+VTI      S S+   D   S+     GS  FSK    D+    EL
Sbjct: 6   GATRKKGNSENEVVVTI------SSSEESTDAKASVAT-EDGSNLFSK----DSQGSIEL 54

Query: 176 AVYENLTSTTQMPALTNASVVEIMNLSPAVNRSPRVPEESGVARRRSLARSVYSKSKSRL 355
              E L S  Q+      S  +I   SP  ++ P+VP ES V RRRSL  S YSK KSRL
Sbjct: 55  ---ERLNSRVQVTPKATPSSPDIAR-SPNASKPPKVPTES-VVRRRSLGSSAYSKPKSRL 109

Query: 356 AEPAYP---------KQVPTTSPHGNSTPTASPLNS 436
            EP+YP         + +P+ SP  +S   ASP++S
Sbjct: 110 LEPSYPIETSVGEKTQLLPSNSPIADS---ASPVHS 142


>ref|XP_002514064.1| conserved hypothetical protein [Ricinus communis]
           gi|223546520|gb|EEF48018.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 753

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 5/149 (3%)
 Frame = +2

Query: 2   GTSGKKDDDEVLVTIMGGEQISRSQNENDICNSLENLPSGSYSFSKYL-----PEDTTFV 166
           G + KK  D+V++ I        S N+     + EN  S  Y+ SK       P ++   
Sbjct: 6   GVAEKKGPDDVVLQI--------STNQEPFLTTQENRDSKFYTLSKSSQLGSSPRNSDLE 57

Query: 167 SELAVYENLTSTTQMPALTNASVVEIMNLSPAVNRSPRVPEESGVARRRSLARSVYSKSK 346
                   L   T   A + +S +   + +P   R P++P    + RR+S +RS +SK K
Sbjct: 58  LSALGNPRLRIQTSTFATSPSSEIAKQSPTPTPTRPPKIPATQSITRRKSFSRSEFSKPK 117

Query: 347 SRLAEPAYPKQVPTTSPHGNSTPTASPLN 433
           SR  EP YP          +   ++SP N
Sbjct: 118 SRFVEPFYPNDAQLKEEKNHLANSSSPYN 146


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