BLASTX nr result

ID: Bupleurum21_contig00021023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021023
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like...   218   3e-55
ref|XP_003543338.1| PREDICTED: pre-mRNA-processing factor 6-like...   218   3e-55
gb|ADN34237.1| pre-mRNA splicing factor [Cucumis melo subsp. melo]    216   1e-54
ref|XP_003540356.1| PREDICTED: pre-mRNA-processing factor 6-like...   214   6e-54
emb|CBI28774.3| unnamed protein product [Vitis vinifera]              211   6e-53

>ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like [Cucumis sativus]
            gi|449514699|ref|XP_004164455.1| PREDICTED:
            pre-mRNA-processing factor 6-like [Cucumis sativus]
          Length = 1023

 Score =  218 bits (556), Expect = 3e-55
 Identities = 107/152 (70%), Positives = 124/152 (81%), Gaps = 1/152 (0%)
 Frame = -3

Query: 501  EAEILMAKALWDQCPNNGISWVALIDIIPRLQRKTKRADAIKKCDHDPHV-TEVDKLFWH 325
            EA+ILMAKAL  +CPN+GI W A I+++PR QRKTK  DAIKKCDHDPHV   V KLFW+
Sbjct: 869  EADILMAKAL-QECPNSGILWAASIEMVPRPQRKTKSMDAIKKCDHDPHVIAAVAKLFWY 927

Query: 324  GKKVDKASNWLSRTVTLAPHIGNFWALYYKVELQHVSEENQKDVLKGCNAAEPKHGEKLQ 145
             +KVDKA NWL+R VTLAP +G+FWALYYK ELQH  +ENQKDVLK C AAEPKHGEK Q
Sbjct: 928  DRKVDKARNWLNRAVTLAPDVGDFWALYYKFELQHGGDENQKDVLKRCIAAEPKHGEKWQ 987

Query: 144  TISKVVENFHQPTRTILKKEVIALGKENDSLK 49
            TISK VEN HQPT +ILKK V+ALGKE  +++
Sbjct: 988  TISKAVENSHQPTESILKKVVVALGKEEGAVE 1019


>ref|XP_003543338.1| PREDICTED: pre-mRNA-processing factor 6-like [Glycine max]
          Length = 1034

 Score =  218 bits (556), Expect = 3e-55
 Identities = 109/150 (72%), Positives = 122/150 (81%), Gaps = 1/150 (0%)
 Frame = -3

Query: 501  EAEILMAKALWDQCPNNGISWVALIDIIPRLQRKTKRADAIKKCDHDPHV-TEVDKLFWH 325
            EA+ILMAKAL  +CPN+GI W A I+++PR QRKTK ADAIKKCDHDPHV   V KLFWH
Sbjct: 880  EADILMAKAL-QECPNSGILWAASIEMVPRPQRKTKSADAIKKCDHDPHVIAAVAKLFWH 938

Query: 324  GKKVDKASNWLSRTVTLAPHIGNFWALYYKVELQHVSEENQKDVLKGCNAAEPKHGEKLQ 145
             +KVDKA  WLSR VTLAP IG+FWAL YK ELQH +EENQKDVLK C AAEPKHGEK Q
Sbjct: 939  DRKVDKARTWLSRAVTLAPDIGDFWALLYKFELQHGTEENQKDVLKRCIAAEPKHGEKWQ 998

Query: 144  TISKVVENFHQPTRTILKKEVIALGKENDS 55
             ISK VEN HQPT +ILKK V+ALGKE ++
Sbjct: 999  AISKAVENSHQPTESILKKVVVALGKEENA 1028


>gb|ADN34237.1| pre-mRNA splicing factor [Cucumis melo subsp. melo]
          Length = 727

 Score =  216 bits (551), Expect = 1e-54
 Identities = 105/152 (69%), Positives = 126/152 (82%), Gaps = 1/152 (0%)
 Frame = -3

Query: 501  EAEILMAKALWDQCPNNGISWVALIDIIPRLQRKTKRADAIKKCDHDPHV-TEVDKLFWH 325
            EA+ILMAKAL  +CPN+GI W A I+++PR QRKTK  DA+KKCDHDPHV   V KLFW+
Sbjct: 573  EADILMAKAL-QECPNSGILWAASIEMVPRPQRKTKSMDALKKCDHDPHVIAAVAKLFWY 631

Query: 324  GKKVDKASNWLSRTVTLAPHIGNFWALYYKVELQHVSEENQKDVLKGCNAAEPKHGEKLQ 145
             +KVDKA +WL+R VTLAP +G+FWALYYK ELQH ++ENQKDVLK C AAEPKHGEK Q
Sbjct: 632  DRKVDKARSWLNRAVTLAPDVGDFWALYYKFELQHGADENQKDVLKRCIAAEPKHGEKWQ 691

Query: 144  TISKVVENFHQPTRTILKKEVIALGKENDSLK 49
            TISK VEN HQPT +ILKK V+ALGKE+ +++
Sbjct: 692  TISKAVENSHQPTESILKKVVVALGKEDGAVE 723


>ref|XP_003540356.1| PREDICTED: pre-mRNA-processing factor 6-like [Glycine max]
          Length = 1041

 Score =  214 bits (545), Expect = 6e-54
 Identities = 108/150 (72%), Positives = 121/150 (80%), Gaps = 1/150 (0%)
 Frame = -3

Query: 501  EAEILMAKALWDQCPNNGISWVALIDIIPRLQRKTKRADAIKKCDHDPHV-TEVDKLFWH 325
            EA+ILMAKAL  +CPN+GI W A I+++PR QRKTK ADAIKKCDHDPHV   V KLFW 
Sbjct: 887  EADILMAKAL-QECPNSGILWAASIEMVPRPQRKTKSADAIKKCDHDPHVIAAVAKLFWL 945

Query: 324  GKKVDKASNWLSRTVTLAPHIGNFWALYYKVELQHVSEENQKDVLKGCNAAEPKHGEKLQ 145
             +KVDKA  WLSR VTLAP IG+FWAL YK ELQH +EENQKDVLK C AAEPKHGEK Q
Sbjct: 946  DRKVDKARTWLSRAVTLAPDIGDFWALLYKFELQHGTEENQKDVLKRCIAAEPKHGEKWQ 1005

Query: 144  TISKVVENFHQPTRTILKKEVIALGKENDS 55
             ISK VEN HQPT +ILKK V+ALGKE ++
Sbjct: 1006 AISKAVENSHQPTESILKKVVVALGKEENA 1035


>emb|CBI28774.3| unnamed protein product [Vitis vinifera]
          Length = 747

 Score =  211 bits (536), Expect = 6e-53
 Identities = 104/147 (70%), Positives = 117/147 (79%), Gaps = 1/147 (0%)
 Frame = -3

Query: 501 EAEILMAKALWDQCPNNGISWVALIDIIPRLQRKTKRADAIKKCDHDPHV-TEVDKLFWH 325
           EA+ILMAKAL  +CP +GI W A I+++PR QRKTK  DA+KKCDHDPHV   V KLFWH
Sbjct: 525 EADILMAKAL-QECPTSGILWAASIEMVPRPQRKTKSLDALKKCDHDPHVIAAVAKLFWH 583

Query: 324 GKKVDKASNWLSRTVTLAPHIGNFWALYYKVELQHVSEENQKDVLKGCNAAEPKHGEKLQ 145
            +KVDKA  WL+R VTLAP IG+FWALYYK E+QH SEENQKDVL+ C AAEPKHGEK Q
Sbjct: 584 DRKVDKARTWLNRAVTLAPDIGDFWALYYKFEVQHGSEENQKDVLRRCVAAEPKHGEKWQ 643

Query: 144 TISKVVENFHQPTRTILKKEVIALGKE 64
            ISK VEN H PT  ILKK V+ALGKE
Sbjct: 644 VISKAVENSHLPTEAILKKAVVALGKE 670


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