BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021014
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   140   1e-31
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               137   1e-30
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   136   2e-30
gb|EAZ45328.1| hypothetical protein OsJ_29974 [Oryza sativa Japo...   135   3e-30
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   134   6e-30

>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/149 (46%), Positives = 99/149 (66%)
 Frame = +1

Query: 7    NILDMIVSEDLILQTIKSMKKGKAPGPDGFNAEFFIHSWDIVGEDFIKAIQYFFNTGYIP 186
            NIL   V+ + I + + +M   K+PGPDG+ +EFF  +W + G DFI AIQ FF  G++P
Sbjct: 744  NILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLP 803

Query: 187  TAFQATAIAMIPKCATPTEMTEFRPISLCMTIYKCISKILANRLKTVMASIIDKAQAAFI 366
                AT +A+IPK     EM ++RPIS C  +YK ISKILANRLK ++ S I + Q+AF+
Sbjct: 804  KGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFV 863

Query: 367  PGRKISDNILLAQELFRGYNRSSGSPKCA 453
              R + +N+LLA EL + Y++ S +P+CA
Sbjct: 864  KERLLMENVLLATELVKDYHKESVTPRCA 892


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/148 (45%), Positives = 98/148 (66%)
 Frame = +1

Query: 10  ILDMIVSEDLILQTIKSMKKGKAPGPDGFNAEFFIHSWDIVGEDFIKAIQYFFNTGYIPT 189
           +L  +VS + I + + SM   K+PGPDGF +EFF  SW+I+G +FI AIQ FF  G++P 
Sbjct: 1   MLTRVVSAEEIKKVLFSMPNDKSPGPDGFTSEFFKESWEILGPEFILAIQSFFALGFLPK 60

Query: 190 AFQATAIAMIPKCATPTEMTEFRPISLCMTIYKCISKILANRLKTVMASIIDKAQAAFIP 369
              +T +A+IPK     EM ++RPIS C  +YK ISKILANRLK ++   I   Q++F+ 
Sbjct: 61  GVNSTILALIPKKLESKEMKDYRPISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVK 120

Query: 370 GRKISDNILLAQELFRGYNRSSGSPKCA 453
            R + +N+LLA +L + Y++ S S +CA
Sbjct: 121 DRLLIENVLLATDLVKDYHKDSISERCA 148


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/148 (44%), Positives = 99/148 (66%)
 Frame = +1

Query: 10  ILDMIVSEDLILQTIKSMKKGKAPGPDGFNAEFFIHSWDIVGEDFIKAIQYFFNTGYIPT 189
           +L  +V+ + I + I SM K K+PGPDG+ +EF+  SW+I+G++ I AIQ FF  G++P 
Sbjct: 169 LLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPK 228

Query: 190 AFQATAIAMIPKCATPTEMTEFRPISLCMTIYKCISKILANRLKTVMASIIDKAQAAFIP 369
              +T +A+IPK     E+ ++RPIS C  +YK ISKILANRLK ++   I   Q+AF+ 
Sbjct: 229 GVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVK 288

Query: 370 GRKISDNILLAQELFRGYNRSSGSPKCA 453
            R + +N+LLA EL + Y++ S S +CA
Sbjct: 289 DRLLIENVLLATELVKDYHKDSISTRCA 316


>gb|EAZ45328.1| hypothetical protein OsJ_29974 [Oryza sativa Japonica Group]
          Length = 469

 Score =  135 bits (340), Expect = 3e-30
 Identities = 66/144 (45%), Positives = 92/144 (63%), Gaps = 2/144 (1%)
 Frame = +1

Query: 28  SEDLILQTIKSMKKGKAPGPDGFNAEFFIHSWDIVGEDFIKAIQYFFNTGYIPTAFQATA 207
           S++ I   +  +   KAPGPDGF A F+  +W ++  D ++A++ FF+TG +P    ATA
Sbjct: 112 SDEEIADALFQIGPLKAPGPDGFPARFYQRNWGLIKSDVVRAVKEFFHTGIMPDGINATA 171

Query: 208 IAMIPKCATPTEMTEFRPISLCMTIYKCISKILANRLKTVMASIIDKAQAAFIPGRKISD 387
           I +IPK   P E+ EFRPISLC  IYK +SK L NRL+ ++  +I + Q+AF+PGR I+D
Sbjct: 172 IVLIPKVNQPMELKEFRPISLCNVIYKIVSKCLVNRLRPILDDLISQNQSAFVPGRMITD 231

Query: 388 NILLAQELFRGY--NRSSGSPKCA 453
           N LLA E F     N+S G   CA
Sbjct: 232 NALLAFECFHSIQRNKSPGKAACA 255


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  134 bits (338), Expect = 6e-30
 Identities = 65/143 (45%), Positives = 95/143 (66%)
 Frame = +1

Query: 25  VSEDLILQTIKSMKKGKAPGPDGFNAEFFIHSWDIVGEDFIKAIQYFFNTGYIPTAFQAT 204
           VS + I + + SM   K+PGPDG+ AEF+  +W+I+G +FI AIQ FF  G++P    +T
Sbjct: 341 VSAEEIHKVVFSMPNDKSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINST 400

Query: 205 AIAMIPKCATPTEMTEFRPISLCMTIYKCISKILANRLKTVMASIIDKAQAAFIPGRKIS 384
            +A+IPK     EM ++RPIS C  +YK ISKI+ANRLK V+   I   Q+AF+  R + 
Sbjct: 401 ILALIPKKKEAKEMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLI 460

Query: 385 DNILLAQELFRGYNRSSGSPKCA 453
           +N+LLA E+ + Y++ S S +CA
Sbjct: 461 ENVLLATEIVKDYHKDSVSSRCA 483