BLASTX nr result

ID: Bupleurum21_contig00021002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021002
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270640.2| PREDICTED: DELLA protein GAI1-like [Vitis vi...    82   5e-14
emb|CBI36955.3| unnamed protein product [Vitis vinifera]               82   5e-14
ref|XP_002515278.1| DELLA protein RGL2, putative [Ricinus commun...    81   8e-14
ref|XP_002302767.1| GRAS family transcription factor [Populus tr...    81   8e-14
ref|XP_002316033.1| GRAS family transcription factor [Populus tr...    78   7e-13

>ref|XP_002270640.2| PREDICTED: DELLA protein GAI1-like [Vitis vinifera]
          Length = 616

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/94 (41%), Positives = 61/94 (64%)
 Frame = -1

Query: 323 YIQFPTKDLDRITTFIHPYGSALSSLSKEETRGXXXXXXXXXXXDEVSNSKFDSARRLLA 144
           Y++F ++  D  T  +HP+G AL  LS+EET+            ++V   +F+ A R L 
Sbjct: 192 YVEFSSQRGDDFTLHMHPFGFALMGLSQEETKDVELVHFLLSAAEKVGCQQFERASRFLT 251

Query: 143 RCQCMASKSGNPIERLVSYFSEALQERISRETGN 42
           RC+ +AS +GNP+ER+V YF++AL+E+I RETG+
Sbjct: 252 RCEWIASDTGNPVERIVFYFAKALREKIDRETGH 285


>emb|CBI36955.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/94 (41%), Positives = 61/94 (64%)
 Frame = -1

Query: 323 YIQFPTKDLDRITTFIHPYGSALSSLSKEETRGXXXXXXXXXXXDEVSNSKFDSARRLLA 144
           Y++F ++  D  T  +HP+G AL  LS+EET+            ++V   +F+ A R L 
Sbjct: 158 YVEFSSQRGDDFTLHMHPFGFALMGLSQEETKDVELVHFLLSAAEKVGCQQFERASRFLT 217

Query: 143 RCQCMASKSGNPIERLVSYFSEALQERISRETGN 42
           RC+ +AS +GNP+ER+V YF++AL+E+I RETG+
Sbjct: 218 RCEWIASDTGNPVERIVFYFAKALREKIDRETGH 251


>ref|XP_002515278.1| DELLA protein RGL2, putative [Ricinus communis]
           gi|223545758|gb|EEF47262.1| DELLA protein RGL2, putative
           [Ricinus communis]
          Length = 642

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/93 (44%), Positives = 59/93 (63%)
 Frame = -1

Query: 323 YIQFPTKDLDRITTFIHPYGSALSSLSKEETRGXXXXXXXXXXXDEVSNSKFDSARRLLA 144
           YIQF  +  D  +  +HP+G ALS LS+EETR            ++V   +FD A RLL+
Sbjct: 224 YIQFSDQRYDDFSMLMHPFGYALSGLSEEETRDVELAHLLLAAAEKVGYQQFDRASRLLS 283

Query: 143 RCQCMASKSGNPIERLVSYFSEALQERISRETG 45
           RC+ +AS+  NP++R+V  F+EAL+ERI + TG
Sbjct: 284 RCEWIASQRANPVQRVVYCFAEALRERIDKATG 316


>ref|XP_002302767.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222844493|gb|EEE82040.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 553

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/93 (44%), Positives = 59/93 (63%)
 Frame = -1

Query: 323 YIQFPTKDLDRITTFIHPYGSALSSLSKEETRGXXXXXXXXXXXDEVSNSKFDSARRLLA 144
           +IQF  +  D  +  +HP+G ALS LS+EETR            ++V   +FD A RLL+
Sbjct: 135 FIQFSDQRYDDFSMLMHPFGYALSGLSEEETRDVELTHLLLATAEKVGYQQFDRASRLLS 194

Query: 143 RCQCMASKSGNPIERLVSYFSEALQERISRETG 45
           RC+ +AS+  NP++R+V YF+EALQ RI + TG
Sbjct: 195 RCEWVASERSNPLQRVVYYFAEALQGRIHKATG 227


>ref|XP_002316033.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222865073|gb|EEF02204.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 561

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/88 (45%), Positives = 58/88 (65%)
 Frame = -1

Query: 275 HPYGSALSSLSKEETRGXXXXXXXXXXXDEVSNSKFDSARRLLARCQCMASKSGNPIERL 96
           +PY  + S LS EET+            ++V N ++DSARRLL +C  ++S +GNP++R+
Sbjct: 166 YPYDLSFSGLSDEETKNVELAECMLASAEKVGNQQYDSARRLLNQCDLLSSNTGNPVQRV 225

Query: 95  VSYFSEALQERISRETGNRRIKMVSENL 12
           V YFSEAL++RI RETG    K+ SE+L
Sbjct: 226 VYYFSEALRKRIDRETG----KVASESL 249


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