BLASTX nr result

ID: Bupleurum21_contig00020964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020964
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317536.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
gb|ABK93857.1| unknown [Populus trichocarpa]                          105   5e-21
emb|CAN75850.1| hypothetical protein VITISV_041106 [Vitis vinifera]   104   6e-21
ref|XP_002279848.1| PREDICTED: uncharacterized protein LOC100249...   104   8e-21
ref|XP_002279728.1| PREDICTED: uncharacterized protein LOC100259...   101   5e-20

>ref|XP_002317536.1| predicted protein [Populus trichocarpa] gi|222860601|gb|EEE98148.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  105 bits (261), Expect = 5e-21
 Identities = 57/99 (57%), Positives = 72/99 (72%), Gaps = 5/99 (5%)
 Frame = +3

Query: 3   MAVDWIAGDLDR--PAVVPAGSAMRVTFLKIKQGLSEEESDKLVEVIGESKDEVSAIDQI 176
           MAVDW+ GDL+     V P+GSA+R+TFLK+K+GL +E  D+++ VI   KD    ID I
Sbjct: 91  MAVDWVTGDLNGGDSLVPPSGSAIRLTFLKLKEGLGDEVKDEILGVIQGIKDTFGGIDHI 150

Query: 177 SFGKNFSPERAKGYSIASLAVFRDLSEL---DANSEIVN 284
           S G+NFSP RAKGYSIASLAVFR LSEL   D++ E+ N
Sbjct: 151 SCGENFSPARAKGYSIASLAVFRGLSELEAVDSDKELAN 189


>gb|ABK93857.1| unknown [Populus trichocarpa]
          Length = 224

 Score =  105 bits (261), Expect = 5e-21
 Identities = 57/99 (57%), Positives = 72/99 (72%), Gaps = 5/99 (5%)
 Frame = +3

Query: 3   MAVDWIAGDLDR--PAVVPAGSAMRVTFLKIKQGLSEEESDKLVEVIGESKDEVSAIDQI 176
           MAVDW+ GDL+     V P+GSA+R+TFLK+K+GL +E  D+++ VI   KD    ID I
Sbjct: 101 MAVDWVTGDLNGGDSLVPPSGSAIRLTFLKLKEGLGDEVKDEILGVIQGIKDTFGGIDHI 160

Query: 177 SFGKNFSPERAKGYSIASLAVFRDLSEL---DANSEIVN 284
           S G+NFSP RAKGYSIASLAVFR LSEL   D++ E+ N
Sbjct: 161 SCGENFSPARAKGYSIASLAVFRGLSELEAVDSDKELAN 199


>emb|CAN75850.1| hypothetical protein VITISV_041106 [Vitis vinifera]
          Length = 225

 Score =  104 bits (260), Expect = 6e-21
 Identities = 48/96 (50%), Positives = 74/96 (77%), Gaps = 3/96 (3%)
 Frame = +3

Query: 3   MAVDWIAGDLDRPAVVPAGSAMRVTFLKIKQGLSEEESDKLVEVIGESKDEVSAIDQISF 182
           MAVDW+A ++  P V   GSAMR+TF+++ +GL +EE +K++  +GE KD + ++DQ+++
Sbjct: 101 MAVDWVADNJSGPVVPRPGSAMRLTFMRLNEGLGDEEKEKVLGAVGEIKDCLGSLDQMTY 160

Query: 183 GKNFSPERAKGYSIASLAVFRDLSE---LDANSEIV 281
           G+NFSP RAKG+SIAS+A+F  L+E   LD+N E+V
Sbjct: 161 GENFSPARAKGFSIASIAIFPGLNELEALDSNPEVV 196


>ref|XP_002279848.1| PREDICTED: uncharacterized protein LOC100249118 [Vitis vinifera]
          Length = 261

 Score =  104 bits (259), Expect = 8e-21
 Identities = 48/96 (50%), Positives = 74/96 (77%), Gaps = 3/96 (3%)
 Frame = +3

Query: 3   MAVDWIAGDLDRPAVVPAGSAMRVTFLKIKQGLSEEESDKLVEVIGESKDEVSAIDQISF 182
           MAVDW+A ++  P V   GSAMR+TF+++ +GL +EE +K++  +GE KD + ++DQ+++
Sbjct: 137 MAVDWVADNISGPVVPRPGSAMRLTFMRLNEGLGDEEKEKVLGAVGEIKDCLGSLDQMTY 196

Query: 183 GKNFSPERAKGYSIASLAVFRDLSE---LDANSEIV 281
           G+NFSP RAKG+SIAS+A+F  L+E   LD+N E+V
Sbjct: 197 GENFSPARAKGFSIASIAIFPGLNELEALDSNPEVV 232


>ref|XP_002279728.1| PREDICTED: uncharacterized protein LOC100259336 isoform 1 [Vitis
           vinifera] gi|359484443|ref|XP_003633110.1| PREDICTED:
           uncharacterized protein LOC100259336 isoform 2 [Vitis
           vinifera]
          Length = 223

 Score =  101 bits (252), Expect = 5e-20
 Identities = 50/96 (52%), Positives = 72/96 (75%), Gaps = 3/96 (3%)
 Frame = +3

Query: 3   MAVDWIAGDLDRPAVVPAGSAMRVTFLKIKQGLSEEESDKLVEVIGESKDEVSAIDQISF 182
           MAVDW+A DL  P V   GSAMR+T +K+K GL +EE  K++  IG+ KD + +++Q+++
Sbjct: 98  MAVDWVADDLSGPVVPRPGSAMRLTIMKLKGGLGDEEKAKILGAIGDIKDCLGSLNQMTY 157

Query: 183 GKNFSPERAKGYSIASLAVFRDLSE---LDANSEIV 281
           G+NFSP RAKG+SIAS+A+F  L+E   LD+N E+V
Sbjct: 158 GENFSPARAKGFSIASVAIFPGLNELEALDSNPELV 193


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