BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020946
         (854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containi...   194   3e-47
ref|XP_003609027.1| Pentatricopeptide repeat-containing protein ...   190   3e-46
ref|XP_002330195.1| predicted protein [Populus trichocarpa] gi|2...   185   1e-44
ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containi...   183   4e-44
ref|XP_002512435.1| pentatricopeptide repeat-containing protein,...   179   5e-43

>ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  194 bits (492), Expect = 3e-47
 Identities = 92/135 (68%), Positives = 112/135 (82%)
 Frame = +1

Query: 7   NIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNVR 186
           ++VTYNI V+ALC  G++R AV+LL+EMF++GL PSH+TYN ++DGY REGN   ALNVR
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVR 532

Query: 187 RRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMMEK 366
             MEK+G + N VTYNVLIK  C K KLEEAN  LN+MLEKGLIPN+TTYDI+++ MMEK
Sbjct: 533 TLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEK 592

Query: 367 GFIPDIDGHLYNSSV 411
           GFIPDIDGHLYN S+
Sbjct: 593 GFIPDIDGHLYNVSI 607



 Score =  104 bits (260), Expect = 2e-20
 Identities = 52/126 (41%), Positives = 76/126 (60%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           P+++TYN  ++  C  GK   A  LL+EM    + P+ IT+NI++DG+CR+ N+  A  V
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMME 363
              M++QGLQPN VTYN LI  LC   KL+EA    ++M   GL PN  TY+ +  G  +
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381

Query: 364 KGFIPD 381
           K  + +
Sbjct: 382 KKMLKE 387



 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 49/129 (37%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PN +T+NI ++  C +     A K+ EEM   GL+P+ +TYN +++G C  G L  AL +
Sbjct: 297 PNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGL 356

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIV-----K 348
           + +M   GL+PN VTYN LI   C+K+ L+EA   L+ + ++GL PN  T++ +     K
Sbjct: 357 QDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGK 416

Query: 349 EGMMEKGFI 375
            G M+  F+
Sbjct: 417 AGRMDDAFL 425



 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 46/122 (37%), Positives = 75/122 (61%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PN++T+N  ++A    G+  DA  L   M D G+ P+  TYN ++ G+CREGN++ A  +
Sbjct: 402 PNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKL 461

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMME 363
            + ME  GL+ + VTYN+L+  LC+K +  +A   L++M E GL P+  TY+ + +G   
Sbjct: 462 AKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFR 521

Query: 364 KG 369
           +G
Sbjct: 522 EG 523



 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 44/126 (34%), Positives = 80/126 (63%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PN+VTYN  +  LC+NGK  +A+ L ++M  +GLKP+ +TYN +++G+C++  L+ A  +
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMME 363
              + K+GL PN +T+N LI    +  ++++A    + ML+ G+ PN +TY+ +  G   
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451

Query: 364 KGFIPD 381
           +G + +
Sbjct: 452 EGNVKE 457



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 30/111 (27%), Positives = 62/111 (55%)
 Frame = +1

Query: 22  NIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNVRRRMEK 201
           N  + +L   G+      + +EM    +  + +T+++V++G C+ G  + A +V   M+ 
Sbjct: 198 NPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKA 257

Query: 202 QGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEG 354
            G  P+ +TYN +I   C+  K+ +A+  L +M+ K + PN+ T++I+ +G
Sbjct: 258 WGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDG 308


>ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510082|gb|AES91224.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  190 bits (483), Expect = 3e-46
 Identities = 91/134 (67%), Positives = 108/134 (80%)
 Frame = +1

Query: 7   NIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNVR 186
           ++VTYNI ++ LC N KSR+A KLL EMF+LGLKP+H+TYN +MDGYC EG L+ ALNVR
Sbjct: 447 DVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVR 506

Query: 187 RRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMMEK 366
            RMEK+  QPN VTYNVLIK  C+  KLE AN  LN+MLEKGL PN+TTYDIV+  M+EK
Sbjct: 507 TRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEK 566

Query: 367 GFIPDIDGHLYNSS 408
           GF PDI+GHLYN S
Sbjct: 567 GFSPDIEGHLYNIS 580



 Score =  108 bits (271), Expect = 1e-21
 Identities = 48/121 (39%), Positives = 80/121 (66%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PNIVTYN  +  LCNNGK  +A+ L ++M  LGLKP+ +TYN +++G+C++  ++ A  V
Sbjct: 306 PNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKV 365

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMME 363
              + KQ L PN +T+N +I   C++  +EE  +  + ML++G++PN +TY+ +  G+  
Sbjct: 366 FDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCR 425

Query: 364 K 366
           K
Sbjct: 426 K 426



 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PN VT+N  ++  C +     A K  EEM   GLKP+ +TYN +++G C  G L  A+++
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDL 330

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIV-----K 348
             +M   GL+PN VTYN LI   C+K+ ++EA    + + ++ L+PN  T++ +     K
Sbjct: 331 WDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCK 390

Query: 349 EGMMEKGF 372
           EGMME+GF
Sbjct: 391 EGMMEEGF 398



 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNG---KSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGA 174
           PN+VTYN  V+  C  G   K   A   ++EM    + P+ +T+N ++DG+C++ N+  A
Sbjct: 233 PNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAA 292

Query: 175 LNVRRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEG 354
                 M+KQGL+PN VTYN LI  LC   KLEEA    ++M+  GL PN  TY+ +  G
Sbjct: 293 KKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALING 352

Query: 355 MMEK 366
             +K
Sbjct: 353 FCKK 356



 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 45/122 (36%), Positives = 69/122 (56%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PN++T+N  ++A C  G   +   L   M D G+ P+  TYN ++ G CR+ +L+ A  +
Sbjct: 376 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKEL 435

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMME 363
              ME +GL+ + VTYN+LI  LC+  K   A   LN+M   GL PN  TY+ + +G   
Sbjct: 436 LNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCM 495

Query: 364 KG 369
           +G
Sbjct: 496 EG 497



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
 Frame = +1

Query: 7   NIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNVR 186
           ++ + N  + AL    K  D   + +EM    +  +  T+NI ++G CR G L  A +  
Sbjct: 164 SLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAI 223

Query: 187 RRMEKQGLQPNTVTYNVLIKCLCEK---RKLEEANTYLNQMLEKGLIPNKTTYDIVKEG 354
             M+  G+ PN VTYN L+   C++    K+ +A  ++ +ML   + PN+ T++ + +G
Sbjct: 224 EDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDG 282


>ref|XP_002330195.1| predicted protein [Populus trichocarpa] gi|222871651|gb|EEF08782.1|
           predicted protein [Populus trichocarpa]
          Length = 529

 Score =  185 bits (470), Expect = 1e-44
 Identities = 85/128 (66%), Positives = 108/128 (84%)
 Frame = +1

Query: 7   NIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNVR 186
           ++VTYNI +++LC  G+SR AVKLL+EMF+ GL PSH+TYN +MDGYCREGNLR AL VR
Sbjct: 402 DVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVR 461

Query: 187 RRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMMEK 366
            RME++G Q N VT+NVLIK  C K +LE+AN  LN+MLE+GL+PN+TTY+I+KE MMEK
Sbjct: 462 TRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEK 521

Query: 367 GFIPDIDG 390
           GF+PDI+G
Sbjct: 522 GFVPDIEG 529



 Score =  109 bits (272), Expect = 9e-22
 Identities = 46/122 (37%), Positives = 80/122 (65%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PN+VTYNI +  LC++GK  +AV L ++M    L+P+ +T+N++++G+C+   +  A+N+
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINL 320

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMME 363
              MEKQG+ PN +TY  LI   C+  ++E+A    N M+++G+ P  +TY+ +  G+  
Sbjct: 321 FNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCR 380

Query: 364 KG 369
           KG
Sbjct: 381 KG 382



 Score =  104 bits (260), Expect = 2e-20
 Identities = 49/120 (40%), Positives = 77/120 (64%), Gaps = 3/120 (2%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNG---KSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGA 174
           PN++TYN  ++  C  G   K   A  +L+EM   G+ P+ +TYNI++DG+C++ N+ GA
Sbjct: 188 PNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGA 247

Query: 175 LNVRRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEG 354
           + V   M++QGL+PN VTYN+LI  LC   K++EA    +QM+   L PN  T++++  G
Sbjct: 248 MRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLING 307



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 45/122 (36%), Positives = 72/122 (59%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PN +TY   ++A C +G+  DA  L   M D G+ P   TYN ++ G CR+G+++ A ++
Sbjct: 331 PNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSL 390

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMME 363
              M  + L  + VTYN+LI  LC+K +  +A   L++M EKGL P+  TY+ + +G   
Sbjct: 391 MNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCR 450

Query: 364 KG 369
           +G
Sbjct: 451 EG 452



 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 48/128 (37%), Positives = 75/128 (58%), Gaps = 5/128 (3%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PN VTYNI ++  C +     A+++  EM   GL+P+ +TYNI+++G C +G +  A+ +
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL 285

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIV-----K 348
           R +M    L+PN VT+NVLI   C+ + + EA    N M ++G+ PN  TY  +     K
Sbjct: 286 RDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCK 345

Query: 349 EGMMEKGF 372
           +G ME  F
Sbjct: 346 DGRMEDAF 353



 Score = 90.1 bits (222), Expect = 6e-16
 Identities = 40/122 (32%), Positives = 70/122 (57%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PN+VT+N+ +   C N    +A+ L  +M   G+ P+ +TY  ++D YC++G +  A  +
Sbjct: 296 PNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFAL 355

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMME 363
              M  +G+ P   TYN LI  LC K  ++ A + +N+M+ K L  +  TY+I+ + + +
Sbjct: 356 YNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCK 415

Query: 364 KG 369
           KG
Sbjct: 416 KG 417



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
 Frame = +1

Query: 7   NIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYC---REGNLRGAL 177
           N++++NI V  LC  GK   A  ++E+M   G+ P+ ITYN ++DGYC   R G +  A 
Sbjct: 154 NVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKAD 213

Query: 178 NVRRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGM 357
            + + M  +G+ PN VTYN+LI   C+   +  A     +M  +GL PN  TY+I+  G+
Sbjct: 214 AILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGL 273

Query: 358 MEKGFIPD 381
              G + +
Sbjct: 274 CSDGKVDE 281


>ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
           gi|449524964|ref|XP_004169491.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  183 bits (465), Expect = 4e-44
 Identities = 84/132 (63%), Positives = 108/132 (81%)
 Frame = +1

Query: 13  VTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNVRRR 192
           VTYNI + A C   + + A +L++EM D GLKPSH+TYNI+++GYC EGNLR ALN+R++
Sbjct: 479 VTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQ 538

Query: 193 MEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMMEKGF 372
           MEK+G   N VTYNVLI+  C K KLE+AN  LN+MLEKGLIPN+TTY+I+KE MMEKGF
Sbjct: 539 MEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGF 598

Query: 373 IPDIDGHLYNSS 408
           +PDI+GHLY++S
Sbjct: 599 LPDIEGHLYHAS 610



 Score =  107 bits (267), Expect = 3e-21
 Identities = 55/137 (40%), Positives = 79/137 (57%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           P +VTYN  V  LCN GK  +A  LL+EM    LKP+ ITYN +++GYC++  L  A  +
Sbjct: 336 PTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEAREL 395

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMME 363
              + KQGL PN +T+N L+   C+  K+EEA      MLEKG +PN +TY+ +  G   
Sbjct: 396 FDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCR 455

Query: 364 KGFIPDIDGHLYNSSVR 414
           +G + ++   L     R
Sbjct: 456 EGKMEEVKNLLNEMQCR 472



 Score =  103 bits (257), Expect = 5e-20
 Identities = 50/129 (38%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNG---KSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGA 174
           PN+VTYN  ++  C  G   K   A  +L+EM +  + P+ +T+N+++DG+C++ NL  A
Sbjct: 263 PNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAA 322

Query: 175 LNVRRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEG 354
           L V   M+ QGL+P  VTYN L+  LC + KL EA   L++ML   L PN  TY+ +  G
Sbjct: 323 LKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALING 382

Query: 355 MMEKGFIPD 381
             +K  + +
Sbjct: 383 YCKKKLLEE 391



 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 45/122 (36%), Positives = 76/122 (62%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PN++T+N  +   C  GK  +A  L + M + G  P+  TYN ++ G+CREG +    N+
Sbjct: 406 PNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNL 465

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMME 363
              M+ +G++ +TVTYN+LI   CEK++ ++A   +++ML+KGL P+  TY+I+  G   
Sbjct: 466 LNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCM 525

Query: 364 KG 369
           +G
Sbjct: 526 EG 527



 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 16/142 (11%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PN VT+N+ ++  C +     A+K+ EEM   GLKP+ +TYN +++G C EG L  A  +
Sbjct: 301 PNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVL 360

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEG--- 354
              M    L+PN +TYN LI   C+K+ LEEA    + + ++GL PN  T++ +  G   
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCK 420

Query: 355 -------------MMEKGFIPD 381
                        M+EKGF+P+
Sbjct: 421 FGKMEEAFLLQKVMLEKGFLPN 442



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 41/121 (33%), Positives = 67/121 (55%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PN++TYN  +   C      +A +L + +   GL P+ IT+N ++ GYC+ G +  A  +
Sbjct: 371 PNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLL 430

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMME 363
           ++ M ++G  PN  TYN LI   C + K+EE    LN+M  +G+  +  TY+I+     E
Sbjct: 431 QKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCE 490

Query: 364 K 366
           K
Sbjct: 491 K 491


>ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548396|gb|EEF49887.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 546

 Score =  179 bits (455), Expect = 5e-43
 Identities = 83/135 (61%), Positives = 108/135 (80%)
 Frame = +1

Query: 7   NIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNVR 186
           +++TYNI +++LCN G+ + A++LL+EM   GLKPS +TYN ++DGYC+EGNLR ALN+R
Sbjct: 410 DLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLR 469

Query: 187 RRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMMEK 366
            +MEK G   N  TYNVLIK  C+K KLE+AN  LN+MLEKGLIPN+ TY+IV E MMEK
Sbjct: 470 SQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEK 529

Query: 367 GFIPDIDGHLYNSSV 411
           GF+PDI+GHLY  +V
Sbjct: 530 GFVPDIEGHLYKVAV 544



 Score =  102 bits (254), Expect = 1e-19
 Identities = 48/122 (39%), Positives = 75/122 (61%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PN+VTYN  +  LCNNGK  +A  L ++M +  LKP+ IT+N +++G+C+   ++ A  +
Sbjct: 269 PNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGEL 328

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMME 363
              M KQG+ PN  TYN+LI   C+   +E+A      ML KG+ P+ +TY+ +  G+  
Sbjct: 329 FDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCR 388

Query: 364 KG 369
           KG
Sbjct: 389 KG 390



 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 45/122 (36%), Positives = 74/122 (60%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PN+ TYNI ++A C +    DA  L   M   G+ P   TYN ++ G CR+G+L  A N+
Sbjct: 339 PNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNL 398

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMME 363
              M+ + L+ + +TYN+LI  LC K ++++A   L++M  KGL P++ TY+ + +G  +
Sbjct: 399 VSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCK 458

Query: 364 KG 369
           +G
Sbjct: 459 EG 460



 Score = 92.8 bits (229), Expect = 9e-17
 Identities = 48/143 (33%), Positives = 80/143 (55%), Gaps = 3/143 (2%)
 Frame = +1

Query: 7   NIVTYNIRVEALCNNGKSRDAVK---LLEEMFDLGLKPSHITYNIVMDGYCREGNLRGAL 177
           N++TYN  ++  C  GK     K   +L+EM   G+ P+ +T+NI++DG+C++ N+  A+
Sbjct: 197 NVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAM 256

Query: 178 NVRRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGM 357
            V   M +QG++PN VTYN LI  LC   K+ EA    +QM+   L PN  T++ +  G 
Sbjct: 257 KVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGF 316

Query: 358 MEKGFIPDIDGHLYNSSVRT*LT 426
            +   +    G L++   +  +T
Sbjct: 317 CKNKMVKQA-GELFDDMPKQGIT 338



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 43/128 (33%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PN VT+NI ++  C +     A+K+  EM   G+KP+ +TYN +++G C  G +  A  +
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIV-----K 348
           R +M    L+PN +T+N L+   C+ + +++A    + M ++G+ PN TTY+I+     K
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353

Query: 349 EGMMEKGF 372
           +  ME  F
Sbjct: 354 DENMEDAF 361



 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 44/122 (36%), Positives = 70/122 (57%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNV 183
           PNI+T+N  +   C N   + A +L ++M   G+ P+  TYNI++D YC++ N+  A  +
Sbjct: 304 PNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFAL 363

Query: 184 RRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMME 363
            R M  +G+ P+  TYN LI  LC K  LE A   +++M  K L  +  TY+I+ + +  
Sbjct: 364 YRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCN 423

Query: 364 KG 369
           KG
Sbjct: 424 KG 425



 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
 Frame = +1

Query: 4   PNIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCRE---GNLRGA 174
           P ++++NI +  LC  GK   A  ++E+M   G+  + ITYN ++DGYC+    G +  A
Sbjct: 161 PTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKA 220

Query: 175 LNVRRRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEG 354
             + + M   G+ PN VT+N+LI   C+ + +  A     +M  +G+ PN  TY+ +  G
Sbjct: 221 DAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLING 280

Query: 355 MMEKG 369
           +   G
Sbjct: 281 LCNNG 285



 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 33/123 (26%), Positives = 62/123 (50%)
 Frame = +1

Query: 7   NIVTYNIRVEALCNNGKSRDAVKLLEEMFDLGLKPSHITYNIVMDGYCREGNLRGALNVR 186
           N +  +I V A   N ++R   +  +   D GLK S  + N +M G  + G +     V 
Sbjct: 92  NSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVY 151

Query: 187 RRMEKQGLQPNTVTYNVLIKCLCEKRKLEEANTYLNQMLEKGLIPNKTTYDIVKEGMMEK 366
           + M ++ ++P  +++N++I  LC+  KL +A   +  M  +G+  N  TY+ + +G  + 
Sbjct: 152 KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKM 211

Query: 367 GFI 375
           G I
Sbjct: 212 GKI 214