BLASTX nr result

ID: Bupleurum21_contig00020843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020843
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548621.1| PREDICTED: uncharacterized protein LOC100799...   139   2e-34
gb|ACU19833.1| unknown [Glycine max]                                  139   2e-34
ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258...   144   6e-33
ref|XP_002511928.1| conserved hypothetical protein [Ricinus comm...   128   1e-28
ref|NP_001233914.1| plant cell wall protein SlTFR88 [Solanum lyc...   130   1e-28

>ref|XP_003548621.1| PREDICTED: uncharacterized protein LOC100799820 [Glycine max]
          Length = 219

 Score =  139 bits (349), Expect(2) = 2e-34
 Identities = 60/119 (50%), Positives = 92/119 (77%)
 Frame = +2

Query: 95  SLSNPNHASFKFGNTVTNLYYHGTEIGEARGPGGQAKARRTMHINETVEVAIGQFLRNPS 274
           S+ NPN ASF++ NT T+LYYHG  +GEARGP G+AKARRT+ +N T++V   + + +P 
Sbjct: 100 SVKNPNVASFRYSNTTTSLYYHGVIVGEARGPPGRAKARRTLRMNVTIDVITARVISSPD 159

Query: 275 FVSDLRSLLLPVSSYTRVSGRIKVMSFVKRHVTISLNCSFVVNLTSQSIQEERCSRKVK 451
           FV+DL S LL +SS++RV G++K+++ +KRHV + +NC+   N+++Q+I+E+ C RKVK
Sbjct: 160 FVTDLGSGLLTMSSFSRVPGQVKILNLIKRHVVVKMNCTTTFNISTQAIKEQSCKRKVK 218



 Score = 32.0 bits (71), Expect(2) = 2e-34
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +1

Query: 1   VINLNQVSLNPLNLTNTISFSSFQNLSLRAQVSVKS 108
           VI +N + +  L L NT+S     N+SL A VSVK+
Sbjct: 68  VITMNSIKITKLQLVNTMSQQPGANMSLVADVSVKN 103


>gb|ACU19833.1| unknown [Glycine max]
          Length = 219

 Score =  139 bits (349), Expect(2) = 2e-34
 Identities = 60/119 (50%), Positives = 92/119 (77%)
 Frame = +2

Query: 95  SLSNPNHASFKFGNTVTNLYYHGTEIGEARGPGGQAKARRTMHINETVEVAIGQFLRNPS 274
           S+ NPN ASF++ NT T+LYYHG  +GEARGP G+AKARRT+ +N T++V   + + +P 
Sbjct: 100 SVKNPNVASFRYSNTTTSLYYHGVIVGEARGPPGRAKARRTLRMNVTIDVIAARVISSPD 159

Query: 275 FVSDLRSLLLPVSSYTRVSGRIKVMSFVKRHVTISLNCSFVVNLTSQSIQEERCSRKVK 451
           FV+DL S LL +SS++RV G++K+++ +KRHV + +NC+   N+++Q+I+E+ C RKVK
Sbjct: 160 FVTDLGSGLLTMSSFSRVPGQVKILNLIKRHVVVKMNCTTTFNISTQAIKEQSCKRKVK 218



 Score = 32.0 bits (71), Expect(2) = 2e-34
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +1

Query: 1   VINLNQVSLNPLNLTNTISFSSFQNLSLRAQVSVKS 108
           VI +N + +  L L NT+S     N+SL A VSVK+
Sbjct: 68  VITMNSIKITKLQLVNTMSQQPGANMSLVADVSVKN 103


>ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258567 [Vitis vinifera]
           gi|147832282|emb|CAN73280.1| hypothetical protein
           VITISV_040609 [Vitis vinifera]
           gi|297745338|emb|CBI40418.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score =  144 bits (364), Expect = 6e-33
 Identities = 63/118 (53%), Positives = 91/118 (77%)
 Frame = +2

Query: 95  SLSNPNHASFKFGNTVTNLYYHGTEIGEARGPGGQAKARRTMHINETVEVAIGQFLRNPS 274
           S+ NPN ASF++ NT T L+Y GT IGEARGP GQAKARRTM +N T+E+ +   + NPS
Sbjct: 101 SVKNPNFASFRYKNTTTTLFYSGTVIGEARGPPGQAKARRTMKMNVTIEIILDSLMSNPS 160

Query: 275 FVSDLRSLLLPVSSYTRVSGRIKVMSFVKRHVTISLNCSFVVNLTSQSIQEERCSRKV 448
            ++D+ S +LP+++Y+RV GR+K++  +K+HV + +NCS  VN+TS+SIQE++C R V
Sbjct: 161 LLTDISSGILPMNTYSRVPGRVKMLKIIKKHVVVKMNCSVTVNITSRSIQEQKCKRDV 218


>ref|XP_002511928.1| conserved hypothetical protein [Ricinus communis]
           gi|223549108|gb|EEF50597.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 218

 Score =  128 bits (322), Expect(2) = 1e-28
 Identities = 57/118 (48%), Positives = 85/118 (72%)
 Frame = +2

Query: 95  SLSNPNHASFKFGNTVTNLYYHGTEIGEARGPGGQAKARRTMHINETVEVAIGQFLRNPS 274
           S+ NPN  SFK+ NT + LYYHG  +GEARGP G +KARRTM +N T+++   + + NP+
Sbjct: 100 SVKNPNIVSFKYDNTTSALYYHGVLVGEARGPPGHSKARRTMRLNATIDLVADKLISNPN 159

Query: 275 FVSDLRSLLLPVSSYTRVSGRIKVMSFVKRHVTISLNCSFVVNLTSQSIQEERCSRKV 448
             +D  + LL V SYT++ G++K++  +K+HVTI +NCS  VN++SQ+IQ ++C  KV
Sbjct: 160 LNTDAATGLLTVDSYTKLPGKVKIL-IIKKHVTIKMNCSLTVNISSQAIQSQKCKNKV 216



 Score = 22.7 bits (47), Expect(2) = 1e-28
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 4   INLNQVSLNPLNLTNTISFSSFQNLSLRAQVSVKS 108
           I LN V +  + L N        N+SL A +SVK+
Sbjct: 69  IKLNNVIITHMELINNTIPKPGTNISLVADLSVKN 103


>ref|NP_001233914.1| plant cell wall protein SlTFR88 [Solanum lycopersicum]
           gi|94549041|gb|ABF39005.1| plant cell wall protein
           SlTFR88 [Solanum lycopersicum]
          Length = 226

 Score =  130 bits (326), Expect = 1e-28
 Identities = 55/119 (46%), Positives = 88/119 (73%)
 Frame = +2

Query: 95  SLSNPNHASFKFGNTVTNLYYHGTEIGEARGPGGQAKARRTMHINETVEVAIGQFLRNPS 274
           S+ NPN++SFK+ NT T + Y    IGEARGP G++KAR+TM +N T+++   + + +P 
Sbjct: 107 SVKNPNYSSFKYSNTTTTISYRDAVIGEARGPPGKSKARKTMRMNVTIDIMTDKIMSHPG 166

Query: 275 FVSDLRSLLLPVSSYTRVSGRIKVMSFVKRHVTISLNCSFVVNLTSQSIQEERCSRKVK 451
              D+ S LL ++SYT V GR+K+++ +K++V + +NCS  VN+TSQSIQ+++C++KVK
Sbjct: 167 LQDDISSGLLTMNSYTSVGGRVKLLNMIKKYVVVKMNCSITVNITSQSIQDQKCTKKVK 225


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