BLASTX nr result

ID: Bupleurum21_contig00020825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020825
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|2...   192   3e-47
ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|2...   191   7e-47
ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like ...   191   9e-47
ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like ...   191   9e-47
ref|XP_002516957.1| ring finger protein, putative [Ricinus commu...   191   9e-47

>ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|222864548|gb|EEF01679.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  192 bits (489), Expect = 3e-47
 Identities = 103/207 (49%), Positives = 127/207 (61%), Gaps = 15/207 (7%)
 Frame = +2

Query: 20  YALSGKIMLSAIVILFAVVVFMIGLHIYARCYLLXXXXXXXXXXXXXXXXASHIVFYVD- 196
           +ALSGKIMLSA+VILF V++ M+ LH YAR YL+                 +H+VFYVD 
Sbjct: 1   FALSGKIMLSAVVILFLVIILMVCLHFYARWYLIRARRRHIRHARNRR---NHLVFYVDS 57

Query: 197 ---PNAASSTANRGLDADVIKSLPLFVYSPLTHRDITDCAVCLSEFEENEAGRVLPKCHH 367
              P   ++   RGL+  V+KSLP+FVYS  TH+D  +CAVCLSEF+ENE GR LPKC+H
Sbjct: 58  AHNPTIVTTQVTRGLEETVLKSLPVFVYSEKTHQDSMECAVCLSEFQENETGRTLPKCNH 117

Query: 368 SFHTDCIDMWFHSHSTCPICRAPVEPVQPN---DKISVVVEKPA--------XXXXXXXX 514
           SFH  CIDMWFHSHSTCP+CR+PVEPV  N   D     +  P                 
Sbjct: 118 SFHIGCIDMWFHSHSTCPLCRSPVEPVTENPVQDGPGYGISVPGSGSSSGTMCQHEEDRV 177

Query: 515 XXVNTTSLADRRKGLDLSGVKIEVPSR 595
              +T+S  DRRK ++L GV IEVP R
Sbjct: 178 GSASTSSFNDRRKQMELIGVTIEVPRR 204


>ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|222838606|gb|EEE76971.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  191 bits (486), Expect = 7e-47
 Identities = 106/205 (51%), Positives = 129/205 (62%), Gaps = 13/205 (6%)
 Frame = +2

Query: 20  YALSGKIMLSAIVILFAVVVFMIGLHIYARCYLLXXXXXXXXXXXXXXXXASHIVFYVD- 196
           YALSGKIMLSAIVILF VV+ M+ LH+YAR YL                  +H+VFYVD 
Sbjct: 16  YALSGKIMLSAIVILFFVVILMVFLHLYARWYLTRARQRQVRRVRNRR---THLVFYVDS 72

Query: 197 ---PNAASSTANRGLDADVIKSLPLFVYSPLTHRDITDCAVCLSEFEENEAGRVLPKCHH 367
              PN  +S   RGL+  V  SLP+FVYS  TH+D  +CAVCLSEFEENE GRVLPKC+H
Sbjct: 73  AQDPNNVTSHVTRGLEETVKNSLPVFVYSRKTHQDSIECAVCLSEFEENERGRVLPKCNH 132

Query: 368 SFHTDCIDMWFHSHSTCPICRAPVEPVQPN---DKISVVVEK------PAXXXXXXXXXX 520
           SFHT+CIDMWFHSHSTCP+CR+PVEPV  N   +  +  + +       +          
Sbjct: 133 SFHTECIDMWFHSHSTCPLCRSPVEPVAENPVPEGSNFGISEAGSGLCTSCQHEEDHVGS 192

Query: 521 VNTTSLADRRKGLDLSGVKIEVPSR 595
            +T+S  D RK + L GV I+VP R
Sbjct: 193 ASTSSFNDGRKPVGLIGVTIDVPRR 217


>ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 2 [Vitis
           vinifera]
          Length = 320

 Score =  191 bits (485), Expect = 9e-47
 Identities = 108/220 (49%), Positives = 129/220 (58%), Gaps = 25/220 (11%)
 Frame = +2

Query: 20  YALSGKIMLSAIVILFAVVVFMIGLHIYARCYLLXXXXXXXXXXXXXXXXASHIVFYVDP 199
           YALSGKIMLSAIVILFAVVV M+ LHIYAR YL                   H+VFYVDP
Sbjct: 23  YALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHARARRRH----HLVFYVDP 78

Query: 200 N---AASSTANRGLDADVIKSLPLFVYSPLTHRDITDCAVCLSEFEENEAGRVLPKCHHS 370
               A+ S+  RGLDA ++ SLP+FVYS  TH D+++CAVCLSEFEENE GR LPKC+HS
Sbjct: 79  TNPAASVSSPTRGLDASILNSLPVFVYSSKTHTDMSECAVCLSEFEENEKGRRLPKCNHS 138

Query: 371 FHTDCIDMWFHSHSTCPICRAPVEPV-------QPNDKISVVVEKPA------------- 490
           FH  CIDMWFHSHSTCP+CR+ V           P D +  + E                
Sbjct: 139 FHIGCIDMWFHSHSTCPLCRSAVNAETSESASRNPTDVVISMAETEGGSTSALCSTCQHD 198

Query: 491 --XXXXXXXXXXVNTTSLADRRKGLDLSGVKIEVPSRTES 604
                       V ++S+  RRK  +L+GV IEVP R E+
Sbjct: 199 EDRTGRLRTSSSVGSSSVGSRRKSSELAGVSIEVPRRNEN 238


>ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 1 [Vitis
           vinifera]
          Length = 317

 Score =  191 bits (485), Expect = 9e-47
 Identities = 108/220 (49%), Positives = 129/220 (58%), Gaps = 25/220 (11%)
 Frame = +2

Query: 20  YALSGKIMLSAIVILFAVVVFMIGLHIYARCYLLXXXXXXXXXXXXXXXXASHIVFYVDP 199
           YALSGKIMLSAIVILFAVVV M+ LHIYAR YL                   H+VFYVDP
Sbjct: 20  YALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHARARRRH----HLVFYVDP 75

Query: 200 N---AASSTANRGLDADVIKSLPLFVYSPLTHRDITDCAVCLSEFEENEAGRVLPKCHHS 370
               A+ S+  RGLDA ++ SLP+FVYS  TH D+++CAVCLSEFEENE GR LPKC+HS
Sbjct: 76  TNPAASVSSPTRGLDASILNSLPVFVYSSKTHTDMSECAVCLSEFEENEKGRRLPKCNHS 135

Query: 371 FHTDCIDMWFHSHSTCPICRAPVEPV-------QPNDKISVVVEKPA------------- 490
           FH  CIDMWFHSHSTCP+CR+ V           P D +  + E                
Sbjct: 136 FHIGCIDMWFHSHSTCPLCRSAVNAETSESASRNPTDVVISMAETEGGSTSALCSTCQHD 195

Query: 491 --XXXXXXXXXXVNTTSLADRRKGLDLSGVKIEVPSRTES 604
                       V ++S+  RRK  +L+GV IEVP R E+
Sbjct: 196 EDRTGRLRTSSSVGSSSVGSRRKSSELAGVSIEVPRRNEN 235


>ref|XP_002516957.1| ring finger protein, putative [Ricinus communis]
           gi|223544045|gb|EEF45571.1| ring finger protein,
           putative [Ricinus communis]
          Length = 292

 Score =  191 bits (485), Expect = 9e-47
 Identities = 104/205 (50%), Positives = 127/205 (61%), Gaps = 13/205 (6%)
 Frame = +2

Query: 20  YALSGKIMLSAIVILFAVVVFMIGLHIYARCYLLXXXXXXXXXXXXXXXXASHIVFYVDP 199
           YALSGKIMLSAI+ILF VV+ M+ LH+YAR YLL                 +H++FYVDP
Sbjct: 18  YALSGKIMLSAIIILFFVVIMMVCLHLYARWYLLNARRRQHRRARNRR---AHLIFYVDP 74

Query: 200 NAASSTA--NRGLDADVIKSLPLFVYSPLTHRDITDCAVCLSEFEENEAGRVLPKCHHSF 373
           + A++    +RGLDA V+ +LP+F YS  TH D  +CAVCLSEFEENE GR LPKC+HSF
Sbjct: 75  SNANNVTVPSRGLDAAVLNTLPVFAYSSKTHPDPIECAVCLSEFEENERGRTLPKCNHSF 134

Query: 374 HTDCIDMWFHSHSTCPICRAPVEPVQPNDKISVVVE-----------KPAXXXXXXXXXX 520
           H +CIDMWFHSHSTCP+CR+ VEPV P D + V  E                        
Sbjct: 135 HIECIDMWFHSHSTCPLCRSAVEPV-PEDSVRVNSEINETGSRAGLCVTCQHEENRVDGV 193

Query: 521 VNTTSLADRRKGLDLSGVKIEVPSR 595
            +T+S   RRK  +  GV IEVP R
Sbjct: 194 ASTSSFNGRRKPAEFVGVTIEVPRR 218


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