BLASTX nr result

ID: Bupleurum21_contig00020777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020777
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278099.2| PREDICTED: protease Do-like 8, chloroplastic...   172   3e-41
ref|XP_003543778.1| PREDICTED: protease Do-like 8, chloroplastic...   157   8e-37
gb|AFK34777.1| unknown [Lotus japonicus]                              156   1e-36
ref|XP_002524371.1| Protease degQ precursor, putative [Ricinus c...   150   1e-34
ref|XP_002305987.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34

>ref|XP_002278099.2| PREDICTED: protease Do-like 8, chloroplastic-like [Vitis vinifera]
           gi|296082900|emb|CBI22201.3| unnamed protein product
           [Vitis vinifera]
          Length = 449

 Score =  172 bits (435), Expect = 3e-41
 Identities = 88/150 (58%), Positives = 107/150 (71%)
 Frame = +3

Query: 3   RRELCFDGVSSSVSPPDQTHSHDSPNDIVSPHPSSTLKIGTVDLDEVMRQYIPSTTRRML 182
           RRE+CFDG+S++ SP    +   S N I  P    T  +G V     +R+ IP TTRR L
Sbjct: 18  RREVCFDGISNACSPTACLNDAVSSNSIPRPVDDQTKDLGVV-----IRKNIPLTTRRTL 72

Query: 183 FSRLFMYSCYFLSSCSTAHALGDPTVTVEQVKPPVLSSGALFPTEEKNVQLFEKNTYAVV 362
           F+ L MYS Y  S   +AHALGDP+VT+E+V PPV  SG LFPTEE+ VQLFE+NTY+VV
Sbjct: 73  FASLLMYSWYHPSRYLSAHALGDPSVTIEEVTPPVSPSGPLFPTEERIVQLFERNTYSVV 132

Query: 363 NVFDVTLQPQLNAKGVVEIPEGNGSGVVWD 452
           N+FDVTL+PQLN  G VE+PEGNGSGVVWD
Sbjct: 133 NIFDVTLRPQLNVTGAVEVPEGNGSGVVWD 162


>ref|XP_003543778.1| PREDICTED: protease Do-like 8, chloroplastic-like [Glycine max]
          Length = 458

 Score =  157 bits (397), Expect = 8e-37
 Identities = 87/153 (56%), Positives = 108/153 (70%), Gaps = 3/153 (1%)
 Frame = +3

Query: 3   RRELCFDGVSSSVSPPDQTHSHDSPNDIVSPHP-SSTLKIG--TVDLDEVMRQYIPSTTR 173
           RRE+CFDG+SS  S           ND VSP   SST+++   T+D   ++R+ + S TR
Sbjct: 30  RREICFDGMSSVCS-----------NDAVSPISISSTVQVQDETLDFGAMLRKIVLSPTR 78

Query: 174 RMLFSRLFMYSCYFLSSCSTAHALGDPTVTVEQVKPPVLSSGALFPTEEKNVQLFEKNTY 353
           R+L   L MYSC   S   +A ALGDP+V +E+V PPV SSG LFP E++ VQLFE+NTY
Sbjct: 79  RVLVVSLTMYSCLCSSRFLSALALGDPSVKLEEVTPPVFSSGPLFPIEDRIVQLFERNTY 138

Query: 354 AVVNVFDVTLQPQLNAKGVVEIPEGNGSGVVWD 452
           +VVN+FDVTL+PQLN  GVVEIPEGNGSGVVWD
Sbjct: 139 SVVNIFDVTLRPQLNVTGVVEIPEGNGSGVVWD 171


>gb|AFK34777.1| unknown [Lotus japonicus]
          Length = 460

 Score =  156 bits (395), Expect = 1e-36
 Identities = 83/153 (54%), Positives = 108/153 (70%), Gaps = 3/153 (1%)
 Frame = +3

Query: 3   RRELCFDGVSSSVSPPDQTHSHDSPNDIVSPHP---SSTLKIGTVDLDEVMRQYIPSTTR 173
           RR++CFDG+S       ++HS   PND VS  P   S  ++  + D + ++ + I S TR
Sbjct: 25  RRKICFDGLSCVC----RSHSQHFPNDTVSSQPISISRPVQDESQDFEAMLSKEIMSPTR 80

Query: 174 RMLFSRLFMYSCYFLSSCSTAHALGDPTVTVEQVKPPVLSSGALFPTEEKNVQLFEKNTY 353
           R+L + L M+SC+  S   +A ALGDP+VT+EQV PPV  SG LFP E++ VQLFE+NTY
Sbjct: 81  RVLIASLTMFSCFQSSRYLSALALGDPSVTLEQVIPPVFPSGPLFPAEDRVVQLFERNTY 140

Query: 354 AVVNVFDVTLQPQLNAKGVVEIPEGNGSGVVWD 452
           +VVN+FDVTL+PQLN  GVVEIPE NGSGVVWD
Sbjct: 141 SVVNIFDVTLRPQLNVTGVVEIPERNGSGVVWD 173


>ref|XP_002524371.1| Protease degQ precursor, putative [Ricinus communis]
           gi|223536332|gb|EEF37982.1| Protease degQ precursor,
           putative [Ricinus communis]
          Length = 453

 Score =  150 bits (379), Expect = 1e-34
 Identities = 81/128 (63%), Positives = 93/128 (72%), Gaps = 3/128 (2%)
 Frame = +3

Query: 78  NDIVSPHP---SSTLKIGTVDLDEVMRQYIPSTTRRMLFSRLFMYSCYFLSSCSTAHALG 248
           ND++S H    S  +K       E   +  PSTTRRML S LFMY  Y  +   +A ALG
Sbjct: 39  NDVLSSHSISISRAIKDEGKYASEEKCKISPSTTRRMLLSSLFMYLGYHPTRYLSAQALG 98

Query: 249 DPTVTVEQVKPPVLSSGALFPTEEKNVQLFEKNTYAVVNVFDVTLQPQLNAKGVVEIPEG 428
           DP+VTVE+V PPV  SGALFPTEE+ VQLFEKNTY+VVN+FDVTL+PQLN  GVVEIPEG
Sbjct: 99  DPSVTVEEVTPPVSLSGALFPTEERIVQLFEKNTYSVVNIFDVTLRPQLNITGVVEIPEG 158

Query: 429 NGSGVVWD 452
           NGSGVVWD
Sbjct: 159 NGSGVVWD 166


>ref|XP_002305987.1| predicted protein [Populus trichocarpa] gi|222848951|gb|EEE86498.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score =  149 bits (376), Expect = 2e-34
 Identities = 79/133 (59%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
 Frame = +3

Query: 63  SHDSPNDIVSPHPSSTLKI--GTVDLDEVMRQYIPSTTRRMLFSRLFMYSCYFLSS-CST 233
           S  S +D+VS +P S   +  GT +L +V+ +  P+ TRRML +  F++  Y   S   +
Sbjct: 17  SLSSDDDVVSSYPISISSVTSGTKNLLQVICKCSPTATRRMLLASFFLFLGYHPPSRYLS 76

Query: 234 AHALGDPTVTVEQVKPPVLSSGALFPTEEKNVQLFEKNTYAVVNVFDVTLQPQLNAKGVV 413
           A ALGDP+VT+EQV PPVL+SGALFP EE+ VQLFEKNTY+VVN+FDVTL+PQLN  G+V
Sbjct: 77  AQALGDPSVTIEQVTPPVLTSGALFPVEERIVQLFEKNTYSVVNIFDVTLRPQLNVTGMV 136

Query: 414 EIPEGNGSGVVWD 452
           EIPEGNGSGVVWD
Sbjct: 137 EIPEGNGSGVVWD 149


Top