BLASTX nr result

ID: Bupleurum21_contig00020765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020765
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134252.1| PREDICTED: ABC transporter G family member 9...    50   2e-09
ref|XP_003547739.1| PREDICTED: ABC transporter G family member 1...    47   5e-09
ref|XP_003548769.1| PREDICTED: ABC transporter G family member 1...    47   5e-09
ref|XP_002314895.1| white-brown-complex ABC transporter family [...    47   7e-09
ref|XP_002867504.1| abc transporter family protein [Arabidopsis ...    48   7e-09

>ref|XP_004134252.1| PREDICTED: ABC transporter G family member 9-like [Cucumis sativus]
           gi|449478319|ref|XP_004155283.1| PREDICTED: ABC
           transporter G family member 9-like [Cucumis sativus]
          Length = 628

 Score = 50.4 bits (119), Expect(2) = 2e-09
 Identities = 24/40 (60%), Positives = 30/40 (75%)
 Frame = -1

Query: 168 LGSTTAQTIVLTL*CLAYGGRIVVVTIH*PSRRLFYMYHK 49
           L STTAQTIV  +   A GGR V++T+H PS RLFY++HK
Sbjct: 214 LDSTTAQTIVTMMGEFAKGGRAVIMTVHQPSSRLFYLFHK 253



 Score = 36.2 bits (82), Expect(2) = 2e-09
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = -3

Query: 256 NGRERKSFSIG*EMRMNPRVLSLDEPTLGL 167
           +G ERK   IG EM +NP +L LDEPT GL
Sbjct: 185 SGGERKRVCIGQEMLINPSLLFLDEPTSGL 214


>ref|XP_003547739.1| PREDICTED: ABC transporter G family member 14-like [Glycine max]
          Length = 656

 Score = 47.0 bits (110), Expect(2) = 5e-09
 Identities = 24/40 (60%), Positives = 29/40 (72%)
 Frame = -1

Query: 168 LGSTTAQTIVLTL*CLAYGGRIVVVTIH*PSRRLFYMYHK 49
           L STTAQ I+ T+  LA GGR VV TIH PS RL++M+ K
Sbjct: 234 LDSTTAQRIITTIKGLACGGRTVVTTIHQPSSRLYHMFDK 273



 Score = 38.1 bits (87), Expect(2) = 5e-09
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = -3

Query: 256 NGRERKSFSIG*EMRMNPRVLSLDEPTLGL 167
           +G ERK  SIG EM +NP +L LDEPT GL
Sbjct: 205 SGGERKRVSIGQEMLINPSLLLLDEPTSGL 234


>ref|XP_003548769.1| PREDICTED: ABC transporter G family member 14-like [Glycine max]
          Length = 651

 Score = 47.0 bits (110), Expect(2) = 5e-09
 Identities = 24/40 (60%), Positives = 29/40 (72%)
 Frame = -1

Query: 168 LGSTTAQTIVLTL*CLAYGGRIVVVTIH*PSRRLFYMYHK 49
           L STTAQ I+ T+  LA GGR VV TIH PS RL++M+ K
Sbjct: 231 LDSTTAQRIITTIKGLASGGRTVVTTIHQPSSRLYHMFDK 270



 Score = 38.1 bits (87), Expect(2) = 5e-09
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = -3

Query: 256 NGRERKSFSIG*EMRMNPRVLSLDEPTLGL 167
           +G ERK  SIG EM +NP +L LDEPT GL
Sbjct: 202 SGGERKRVSIGQEMLINPSLLLLDEPTSGL 231


>ref|XP_002314895.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222863935|gb|EEF01066.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 683

 Score = 46.6 bits (109), Expect(2) = 7e-09
 Identities = 26/40 (65%), Positives = 28/40 (70%)
 Frame = -1

Query: 168 LGSTTAQTIVLTL*CLAYGGRIVVVTIH*PSRRLFYMYHK 49
           L STTAQ IV TL  LA GGR VV TIH PS RL+ M+ K
Sbjct: 260 LDSTTAQRIVATLRGLARGGRTVVTTIHQPSSRLYRMFDK 299



 Score = 38.1 bits (87), Expect(2) = 7e-09
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = -3

Query: 256 NGRERKSFSIG*EMRMNPRVLSLDEPTLGL 167
           +G ERK  SIG EM +NP +L LDEPT GL
Sbjct: 231 SGGERKRVSIGLEMLVNPSLLLLDEPTSGL 260


>ref|XP_002867504.1| abc transporter family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313340|gb|EFH43763.1| abc transporter family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 639

 Score = 48.1 bits (113), Expect(2) = 7e-09
 Identities = 27/40 (67%), Positives = 28/40 (70%)
 Frame = -1

Query: 168 LGSTTAQTIVLTL*CLAYGGRIVVVTIH*PSRRLFYMYHK 49
           L STTAQ IV  L  LA GGR VV TIH PS RLFYM+ K
Sbjct: 223 LDSTTAQRIVSILWELARGGRTVVTTIHQPSSRLFYMFDK 262



 Score = 36.6 bits (83), Expect(2) = 7e-09
 Identities = 18/30 (60%), Positives = 22/30 (73%)
 Frame = -3

Query: 256 NGRERKSFSIG*EMRMNPRVLSLDEPTLGL 167
           +G ERK  SIG E+ +NP +L LDEPT GL
Sbjct: 194 SGGERKRVSIGQEILINPSLLFLDEPTSGL 223


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