BLASTX nr result

ID: Bupleurum21_contig00020719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020719
         (1729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279124.2| PREDICTED: tryptophan synthase beta chain 2 ...   790   0.0  
emb|CBI16881.3| unnamed protein product [Vitis vinifera]              790   0.0  
ref|XP_002329254.1| predicted protein [Populus trichocarpa] gi|2...   776   0.0  
ref|XP_003541227.1| PREDICTED: tryptophan synthase beta chain 2-...   769   0.0  
ref|XP_004156228.1| PREDICTED: tryptophan synthase beta chain 2-...   758   0.0  

>ref|XP_002279124.2| PREDICTED: tryptophan synthase beta chain 2 [Vitis vinifera]
          Length = 483

 Score =  790 bits (2040), Expect = 0.0
 Identities = 379/461 (82%), Positives = 412/461 (89%), Gaps = 1/461 (0%)
 Frame = +2

Query: 179  LKLSHSCR-STKKTTVYATSLGIEIPRQWYNIIADLPVKPPPALHPKTYEPVTPQDWSPL 355
            L+ S  CR   +  +  A    +EIP QWYN+IADLPVKPPPALHP+T EP+ P+D SPL
Sbjct: 19   LRASPRCRVRARAASSKAGPQAVEIPHQWYNLIADLPVKPPPALHPQTQEPIKPEDLSPL 78

Query: 356  FPEELIKQENSTARFIDIPKEVIDVYELWRPTPLIRAKRLEKLLGTPARIYYKYEGVSPA 535
            FP+ELIKQE ST RFI IP+EVIDVY LWRPTPLIRAKRLEKLL TPARIYYKYEGVSPA
Sbjct: 79   FPDELIKQEASTDRFIAIPEEVIDVYRLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPA 138

Query: 536  GSHKPNTAVPQVWYNSQEGVKNVVTETGAGQWGSSLAFACSLFGLNCEVWQVRASYDQKP 715
            GSHKPNTAVPQVWYN+QEGVK+V TETGAGQWGSSLAFACSLFGL+CEVWQVRASYDQKP
Sbjct: 139  GSHKPNTAVPQVWYNAQEGVKSVTTETGAGQWGSSLAFACSLFGLDCEVWQVRASYDQKP 198

Query: 716  YRKLMMQTWGANVHPSPSNITESGRKILEKDPASPGSLGIAISEAVEVAAKNSDTKYCLG 895
            YR LMMQTWGA VHPSPS+ITE+GRKIL+ +P+SPGSLGIAISEAVEVAA N+DTKYCLG
Sbjct: 199  YRNLMMQTWGAKVHPSPSSITEAGRKILQMNPSSPGSLGIAISEAVEVAAANADTKYCLG 258

Query: 896  SVLNHVLLHQTVIGEECIKQMEAIGETPDVIIGCTGGGSNFGGLAFPFIREKLAGKINPL 1075
            SVLNHVLLHQTVIGEECIKQMEAIGETPDVIIGCTGGGSNFGGL FPFIREKL G+INPL
Sbjct: 259  SVLNHVLLHQTVIGEECIKQMEAIGETPDVIIGCTGGGSNFGGLTFPFIREKLKGRINPL 318

Query: 1076 IRAVEPAACPSLTKGVYAYDYGDTAGMTPLMKMHTLGHEFIPDPIHAGGLRYHGMAPLIS 1255
            IRAVEP ACPSLTKGVYAYDYGDTAGMTPLMKMHTLGH+F+PDPIHAGGLRYHGMAPL+S
Sbjct: 319  IRAVEPTACPSLTKGVYAYDYGDTAGMTPLMKMHTLGHDFVPDPIHAGGLRYHGMAPLLS 378

Query: 1256 HVYDLAFMEALAIPQIECFRGAIQFARTEGLXXXXXXXXXXXXXXREALHCRQTGESKVI 1435
            HVY+L FMEA++IPQIECF+GAIQFARTEGL              REALHCR+TGESKVI
Sbjct: 379  HVYELGFMEAISIPQIECFQGAIQFARTEGLIPAPEPTHAIAATIREALHCRETGESKVI 438

Query: 1436 LMAMCGHGHFDLPAYDKYLQGSMVDLSFSEERIRTSMANIP 1558
            L AMCGHGHFDLPAY+KYLQG+MVDLSF EE+I+ S+ANIP
Sbjct: 439  LTAMCGHGHFDLPAYEKYLQGNMVDLSFEEEKIKASLANIP 479


>emb|CBI16881.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  790 bits (2040), Expect = 0.0
 Identities = 379/461 (82%), Positives = 412/461 (89%), Gaps = 1/461 (0%)
 Frame = +2

Query: 179  LKLSHSCR-STKKTTVYATSLGIEIPRQWYNIIADLPVKPPPALHPKTYEPVTPQDWSPL 355
            L+ S  CR   +  +  A    +EIP QWYN+IADLPVKPPPALHP+T EP+ P+D SPL
Sbjct: 31   LRASPRCRVRARAASSKAGPQAVEIPHQWYNLIADLPVKPPPALHPQTQEPIKPEDLSPL 90

Query: 356  FPEELIKQENSTARFIDIPKEVIDVYELWRPTPLIRAKRLEKLLGTPARIYYKYEGVSPA 535
            FP+ELIKQE ST RFI IP+EVIDVY LWRPTPLIRAKRLEKLL TPARIYYKYEGVSPA
Sbjct: 91   FPDELIKQEASTDRFIAIPEEVIDVYRLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPA 150

Query: 536  GSHKPNTAVPQVWYNSQEGVKNVVTETGAGQWGSSLAFACSLFGLNCEVWQVRASYDQKP 715
            GSHKPNTAVPQVWYN+QEGVK+V TETGAGQWGSSLAFACSLFGL+CEVWQVRASYDQKP
Sbjct: 151  GSHKPNTAVPQVWYNAQEGVKSVTTETGAGQWGSSLAFACSLFGLDCEVWQVRASYDQKP 210

Query: 716  YRKLMMQTWGANVHPSPSNITESGRKILEKDPASPGSLGIAISEAVEVAAKNSDTKYCLG 895
            YR LMMQTWGA VHPSPS+ITE+GRKIL+ +P+SPGSLGIAISEAVEVAA N+DTKYCLG
Sbjct: 211  YRNLMMQTWGAKVHPSPSSITEAGRKILQMNPSSPGSLGIAISEAVEVAAANADTKYCLG 270

Query: 896  SVLNHVLLHQTVIGEECIKQMEAIGETPDVIIGCTGGGSNFGGLAFPFIREKLAGKINPL 1075
            SVLNHVLLHQTVIGEECIKQMEAIGETPDVIIGCTGGGSNFGGL FPFIREKL G+INPL
Sbjct: 271  SVLNHVLLHQTVIGEECIKQMEAIGETPDVIIGCTGGGSNFGGLTFPFIREKLKGRINPL 330

Query: 1076 IRAVEPAACPSLTKGVYAYDYGDTAGMTPLMKMHTLGHEFIPDPIHAGGLRYHGMAPLIS 1255
            IRAVEP ACPSLTKGVYAYDYGDTAGMTPLMKMHTLGH+F+PDPIHAGGLRYHGMAPL+S
Sbjct: 331  IRAVEPTACPSLTKGVYAYDYGDTAGMTPLMKMHTLGHDFVPDPIHAGGLRYHGMAPLLS 390

Query: 1256 HVYDLAFMEALAIPQIECFRGAIQFARTEGLXXXXXXXXXXXXXXREALHCRQTGESKVI 1435
            HVY+L FMEA++IPQIECF+GAIQFARTEGL              REALHCR+TGESKVI
Sbjct: 391  HVYELGFMEAISIPQIECFQGAIQFARTEGLIPAPEPTHAIAATIREALHCRETGESKVI 450

Query: 1436 LMAMCGHGHFDLPAYDKYLQGSMVDLSFSEERIRTSMANIP 1558
            L AMCGHGHFDLPAY+KYLQG+MVDLSF EE+I+ S+ANIP
Sbjct: 451  LTAMCGHGHFDLPAYEKYLQGNMVDLSFEEEKIKASLANIP 491


>ref|XP_002329254.1| predicted protein [Populus trichocarpa] gi|222870708|gb|EEF07839.1|
            predicted protein [Populus trichocarpa]
          Length = 461

 Score =  776 bits (2003), Expect = 0.0
 Identities = 367/459 (79%), Positives = 411/459 (89%)
 Frame = +2

Query: 182  KLSHSCRSTKKTTVYATSLGIEIPRQWYNIIADLPVKPPPALHPKTYEPVTPQDWSPLFP 361
            +LS+  R   + ++ A    + IP QWYN++ADL VKPPP LHPKT+EPV P+D SPLFP
Sbjct: 1    RLSNGGRVRARASLNADLKAVGIPHQWYNVVADLSVKPPPPLHPKTFEPVKPEDLSPLFP 60

Query: 362  EELIKQENSTARFIDIPKEVIDVYELWRPTPLIRAKRLEKLLGTPARIYYKYEGVSPAGS 541
            +ELI+QE ST +FIDIP+EV+D+Y LWRPTPLIRAKRLEKLL TPARIYYKYEG SPAGS
Sbjct: 61   DELIRQEASTDKFIDIPEEVLDIYSLWRPTPLIRAKRLEKLLDTPARIYYKYEGGSPAGS 120

Query: 542  HKPNTAVPQVWYNSQEGVKNVVTETGAGQWGSSLAFACSLFGLNCEVWQVRASYDQKPYR 721
            HKPNTAVPQV+YN+Q+G+KNVVTETGAGQWG SLAFACSLFGL+CEVWQVRASYDQKPYR
Sbjct: 121  HKPNTAVPQVFYNAQQGIKNVVTETGAGQWGCSLAFACSLFGLDCEVWQVRASYDQKPYR 180

Query: 722  KLMMQTWGANVHPSPSNITESGRKILEKDPASPGSLGIAISEAVEVAAKNSDTKYCLGSV 901
            +LMM+TWGA VHPSPS+ITE+GR+IL+ DP+SPGSLGIAISEAVEVAAKN+DTKYCLGSV
Sbjct: 181  RLMMETWGAKVHPSPSSITETGRRILQMDPSSPGSLGIAISEAVEVAAKNADTKYCLGSV 240

Query: 902  LNHVLLHQTVIGEECIKQMEAIGETPDVIIGCTGGGSNFGGLAFPFIREKLAGKINPLIR 1081
            LNHVLLHQTVIGEECIKQMEAIGETPDVIIGCTGGGSNF GL+FPFIREKL GKINP+I+
Sbjct: 241  LNHVLLHQTVIGEECIKQMEAIGETPDVIIGCTGGGSNFAGLSFPFIREKLNGKINPVIK 300

Query: 1082 AVEPAACPSLTKGVYAYDYGDTAGMTPLMKMHTLGHEFIPDPIHAGGLRYHGMAPLISHV 1261
            AVEPAACPSLTKGVYAYDYGDTAGMTPLMKMHTLGH+FIPDPIHAGGLRYHGMAPLISHV
Sbjct: 301  AVEPAACPSLTKGVYAYDYGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHV 360

Query: 1262 YDLAFMEALAIPQIECFRGAIQFARTEGLXXXXXXXXXXXXXXREALHCRQTGESKVILM 1441
            Y+L FMEA+AIPQIECFRGAIQFAR+EGL              REALHC++TGE+KVILM
Sbjct: 361  YELGFMEAMAIPQIECFRGAIQFARSEGLIPAPEPTHAIAATIREALHCKETGEAKVILM 420

Query: 1442 AMCGHGHFDLPAYDKYLQGSMVDLSFSEERIRTSMANIP 1558
            AMCGHGHFDL +Y+KYLQG MVDLSF EE+IR S+  +P
Sbjct: 421  AMCGHGHFDLKSYEKYLQGKMVDLSFDEEKIRASLDKVP 459


>ref|XP_003541227.1| PREDICTED: tryptophan synthase beta chain 2-like [Glycine max]
          Length = 502

 Score =  769 bits (1985), Expect = 0.0
 Identities = 364/459 (79%), Positives = 408/459 (88%)
 Frame = +2

Query: 182  KLSHSCRSTKKTTVYATSLGIEIPRQWYNIIADLPVKPPPALHPKTYEPVTPQDWSPLFP 361
            +LS +C+   + T+ A+   I IP QWYN+IADLPVKPPP LHPKTYEP+ P D SPLFP
Sbjct: 42   RLSSACKV--RATLGASDKSIGIPNQWYNVIADLPVKPPPPLHPKTYEPIKPDDLSPLFP 99

Query: 362  EELIKQENSTARFIDIPKEVIDVYELWRPTPLIRAKRLEKLLGTPARIYYKYEGVSPAGS 541
            +ELI+QE ++ RFIDIP EV+DVY+LWRPTPLIRAKRLEKLL TPARIYYKYEGVSPAGS
Sbjct: 100  DELIRQEIASDRFIDIPDEVLDVYKLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGS 159

Query: 542  HKPNTAVPQVWYNSQEGVKNVVTETGAGQWGSSLAFACSLFGLNCEVWQVRASYDQKPYR 721
            HKPN+AVPQ WYN Q GVKNVVTETGAGQWGS+LAFACS+FGL CEVWQVRASYD KPYR
Sbjct: 160  HKPNSAVPQAWYNLQAGVKNVVTETGAGQWGSALAFACSIFGLGCEVWQVRASYDSKPYR 219

Query: 722  KLMMQTWGANVHPSPSNITESGRKILEKDPASPGSLGIAISEAVEVAAKNSDTKYCLGSV 901
            +LMMQTWGA VHPSPS ITE+GR++L++DP+SPGSLGIAISEAVEVAAKN+DTKYCLGSV
Sbjct: 220  RLMMQTWGAKVHPSPSMITEAGRRMLQEDPSSPGSLGIAISEAVEVAAKNADTKYCLGSV 279

Query: 902  LNHVLLHQTVIGEECIKQMEAIGETPDVIIGCTGGGSNFGGLAFPFIREKLAGKINPLIR 1081
            LNHVLLHQ+VIGEECIKQMEAIGETPDVIIGCTGGGSNF GL+FPF+REKL  KINP+IR
Sbjct: 280  LNHVLLHQSVIGEECIKQMEAIGETPDVIIGCTGGGSNFAGLSFPFLREKLNKKINPVIR 339

Query: 1082 AVEPAACPSLTKGVYAYDYGDTAGMTPLMKMHTLGHEFIPDPIHAGGLRYHGMAPLISHV 1261
            AVEPAACPSLTKGVY YDYGDTAGMTPLMKMHTLGH+F+PDPIHAGGLRYHGMAPLISHV
Sbjct: 340  AVEPAACPSLTKGVYTYDYGDTAGMTPLMKMHTLGHDFVPDPIHAGGLRYHGMAPLISHV 399

Query: 1262 YDLAFMEALAIPQIECFRGAIQFARTEGLXXXXXXXXXXXXXXREALHCRQTGESKVILM 1441
            YDL  MEA+AIPQ ECF+GAIQFAR+EGL              REA+ CR+ GE+KVIL 
Sbjct: 400  YDLGLMEAIAIPQTECFQGAIQFARSEGLIPAPEPTHAIAATIREAIRCREAGEAKVILT 459

Query: 1442 AMCGHGHFDLPAYDKYLQGSMVDLSFSEERIRTSMANIP 1558
            AMCGHGHFDLPAY+KYLQG+MVDLSFSE++++ S+ANIP
Sbjct: 460  AMCGHGHFDLPAYEKYLQGNMVDLSFSEDKMKASLANIP 498


>ref|XP_004156228.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 482

 Score =  758 bits (1958), Expect = 0.0
 Identities = 356/461 (77%), Positives = 404/461 (87%)
 Frame = +2

Query: 176  HLKLSHSCRSTKKTTVYATSLGIEIPRQWYNIIADLPVKPPPALHPKTYEPVTPQDWSPL 355
            HL+ S+  R+  K         +E+PRQWYN++ADLPVKPPP LHPKTYEP+ P+D S L
Sbjct: 21   HLRFSNGYRT--KAASNPNLKAVEVPRQWYNLVADLPVKPPPPLHPKTYEPIKPEDLSHL 78

Query: 356  FPEELIKQENSTARFIDIPKEVIDVYELWRPTPLIRAKRLEKLLGTPARIYYKYEGVSPA 535
            FP+ELIKQE ST R+I+IP EV+D+Y LWRPTPLIRAKRLEKLL TPARIYYKYEGVSPA
Sbjct: 79   FPDELIKQEASTERYINIPDEVVDIYGLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPA 138

Query: 536  GSHKPNTAVPQVWYNSQEGVKNVVTETGAGQWGSSLAFACSLFGLNCEVWQVRASYDQKP 715
            GSHKPN+AVPQVWYN+QEGVKNVVTETGAGQWG SLAFACS+FG+ CEVWQVRASYDQKP
Sbjct: 139  GSHKPNSAVPQVWYNAQEGVKNVVTETGAGQWGCSLAFACSIFGIGCEVWQVRASYDQKP 198

Query: 716  YRKLMMQTWGANVHPSPSNITESGRKILEKDPASPGSLGIAISEAVEVAAKNSDTKYCLG 895
            YR++MM+TWGA VHPSPS+IT++GRK L+ DP+SPGSLGIAISEAVEVAA N+DTKYCLG
Sbjct: 199  YRRMMMETWGAKVHPSPSDITDAGRKFLQVDPSSPGSLGIAISEAVEVAALNADTKYCLG 258

Query: 896  SVLNHVLLHQTVIGEECIKQMEAIGETPDVIIGCTGGGSNFGGLAFPFIREKLAGKINPL 1075
            SVLNHVLLHQTVIGEEC+KQ+EA+GETPD+IIGCTGGGSNF GL+FPF+REKLAG INP+
Sbjct: 259  SVLNHVLLHQTVIGEECLKQLEALGETPDLIIGCTGGGSNFAGLSFPFLREKLAGNINPV 318

Query: 1076 IRAVEPAACPSLTKGVYAYDYGDTAGMTPLMKMHTLGHEFIPDPIHAGGLRYHGMAPLIS 1255
            IRAVEPAACPSLTKGVYAYDYGDTAGMTPLMKMHTLGH FIPDPIHAGGLRYHGMAPLIS
Sbjct: 319  IRAVEPAACPSLTKGVYAYDYGDTAGMTPLMKMHTLGHNFIPDPIHAGGLRYHGMAPLIS 378

Query: 1256 HVYDLAFMEALAIPQIECFRGAIQFARTEGLXXXXXXXXXXXXXXREALHCRQTGESKVI 1435
            HVY+L  +EA+++PQ ECF+GAIQFAR+EGL              REAL CR+TGESKVI
Sbjct: 379  HVYNLGLLEAISLPQTECFQGAIQFARSEGLIPAPEPTHAIAATIREALRCRETGESKVI 438

Query: 1436 LMAMCGHGHFDLPAYDKYLQGSMVDLSFSEERIRTSMANIP 1558
            L AMCGHGHFDLPAY+KYLQG + DLSF+ E+I+ S+  IP
Sbjct: 439  LTAMCGHGHFDLPAYEKYLQGGISDLSFANEKIQESLTTIP 479


Top