BLASTX nr result

ID: Bupleurum21_contig00020675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020675
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274305.1| PREDICTED: UPF0496 protein At3g19330 [Vitis ...   216   4e-54
emb|CAN67266.1| hypothetical protein VITISV_028729 [Vitis vinifera]   216   6e-54
ref|XP_002512821.1| conserved hypothetical protein [Ricinus comm...   184   2e-44
ref|XP_002512820.1| conserved hypothetical protein [Ricinus comm...   179   6e-43
ref|NP_188564.2| uncharacterized protein [Arabidopsis thaliana] ...   156   4e-36

>ref|XP_002274305.1| PREDICTED: UPF0496 protein At3g19330 [Vitis vinifera]
           gi|297745643|emb|CBI40808.3| unnamed protein product
           [Vitis vinifera]
          Length = 376

 Score =  216 bits (550), Expect = 4e-54
 Identities = 122/235 (51%), Positives = 154/235 (65%), Gaps = 6/235 (2%)
 Frame = -3

Query: 691 MLPCLRPTSSADMPNLH-PLSSHLQGASNEGASDSSNQPSPTVNLSNEYKSAVQTTSYGE 515
           ML CL   SSA       P+ +     S E    S +Q SPTVNL+ EY  AVQT SY E
Sbjct: 1   MLQCLSLKSSASTSTTTVPVEN-----SREDTPRSISQTSPTVNLTREYTLAVQTNSYNE 55

Query: 514 IWSKFH---PDDTSLYEVDSEHFNGHEEEEQFLR--EVLNPNRECVQEALKYAKPNTLTH 350
           IWSK H    DD +  + D +     EE+ Q LR   VL P+RECVQ+AL++A+ NTLT 
Sbjct: 56  IWSKIHVRHQDDYTNTDPDQDTDGEREEDVQQLRLAHVLRPDRECVQDALRHARSNTLTR 115

Query: 349 LISSYFEQSEHTSHFCLLLYHGLQRARSHYAPLHKLIAILPLDSESEFLNQSQCDQSFKV 170
           L+S YF+ SE+TS  CLLL+  +  A S Y+PLH L+ ILPLDS+S  L QSQC+Q+F V
Sbjct: 116 LVSDYFDHSENTSQLCLLLHRSVHHAHSLYSPLHDLLDILPLDSDS--LTQSQCNQAFDV 173

Query: 169 FFEFDRLENPFPEPGSNNFYEMHHCFSQLKQKLDSSLGKSRSRIRLVRRATVGCA 5
           F +FD L+NPFP P S+NF +M  CFSQLK++LD  + KSRS+IRL+ RAT G A
Sbjct: 174 FLQFDSLDNPFPCPDSHNFRDMRRCFSQLKEQLDGHIRKSRSKIRLICRATAGSA 228


>emb|CAN67266.1| hypothetical protein VITISV_028729 [Vitis vinifera]
          Length = 996

 Score =  216 bits (549), Expect = 6e-54
 Identities = 114/208 (54%), Positives = 144/208 (69%), Gaps = 5/208 (2%)
 Frame = -3

Query: 613  SNEGASDSSNQPSPTVNLSNEYKSAVQTTSYGEIWSKFH---PDDTSLYEVDSEHFNGHE 443
            S E    S +Q SPTVNL+ EY  AVQT SY EIWSK H    DD +  + D +     E
Sbjct: 643  SREDTPRSISQTSPTVNLTREYTLAVQTNSYNEIWSKIHVRHQDDYTNTDPDQDTDGERE 702

Query: 442  EEEQFLR--EVLNPNRECVQEALKYAKPNTLTHLISSYFEQSEHTSHFCLLLYHGLQRAR 269
            E+ Q LR   VL P+RECVQ+AL++A+ NTLT L+S YF+ SE+TS  CLLL+  +  A 
Sbjct: 703  EDVQQLRLAHVLRPDRECVQDALRHARSNTLTRLVSDYFDHSENTSQLCLLLHRSVHHAH 762

Query: 268  SHYAPLHKLIAILPLDSESEFLNQSQCDQSFKVFFEFDRLENPFPEPGSNNFYEMHHCFS 89
            S Y+PLH L+ ILPLDS+S  L QSQC+Q+F VF +FD L+NPFP P S+NF +M  CFS
Sbjct: 763  SLYSPLHDLLDILPLDSDS--LTQSQCBQAFDVFLQFDSLDNPFPCPDSHNFRDMRRCFS 820

Query: 88   QLKQKLDSSLGKSRSRIRLVRRATVGCA 5
            QLK++LD  + KSRS+IRL+ RAT G A
Sbjct: 821  QLKEQLDGHIRKSRSKIRLICRATAGSA 848


>ref|XP_002512821.1| conserved hypothetical protein [Ricinus communis]
           gi|223547832|gb|EEF49324.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 407

 Score =  184 bits (466), Expect = 2e-44
 Identities = 103/235 (43%), Positives = 146/235 (62%), Gaps = 7/235 (2%)
 Frame = -3

Query: 685 PCLRPTSSADMPNLHPLSSHLQ-----GASNEGASDSSNQPSPTVNLSNEYKSAVQTTSY 521
           P  R TS   +PN  P    L      G S +G   S    SP VNL+ EY   VQ+ S+
Sbjct: 29  PAARSTS---IPNSPPTIIDLNHDCEAGNSTDGTPVSCTLQSPVVNLTREYALYVQSNSF 85

Query: 520 GEIWSKFHPDDTSLYEVDSEHFN-GHEEEEQF-LREVLNPNRECVQEALKYAKPNTLTHL 347
            E+ S+ H  +    E      N   E+  QF L +VL+PNR+CV++AL++AKPNTLT L
Sbjct: 86  NEMRSRIHHQEIENGEQIESSLNIDVEDVRQFVLAQVLHPNRQCVEDALRHAKPNTLTRL 145

Query: 346 ISSYFEQSEHTSHFCLLLYHGLQRARSHYAPLHKLIAILPLDSESEFLNQSQCDQSFKVF 167
           +S+YF+ SE T+  CLLL+  + RAR  Y+P+  L+ +LP++ +S  L QSQCD ++++F
Sbjct: 146 VSNYFDHSESTTDLCLLLHRSVFRARDIYSPIRNLLEVLPVEMDS--LTQSQCDYAYEIF 203

Query: 166 FEFDRLENPFPEPGSNNFYEMHHCFSQLKQKLDSSLGKSRSRIRLVRRATVGCAI 2
            +FDR +NPFP P S+ F  +H  FS+L Q+LD  L KSRS++ LVRRAT+  A+
Sbjct: 204 MQFDRCDNPFPCPFSHEFEGIHRSFSELSQQLDHRLRKSRSKVHLVRRATLASAL 258


>ref|XP_002512820.1| conserved hypothetical protein [Ricinus communis]
           gi|223547831|gb|EEF49323.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 389

 Score =  179 bits (454), Expect = 6e-43
 Identities = 101/242 (41%), Positives = 148/242 (61%), Gaps = 12/242 (4%)
 Frame = -3

Query: 691 MLPCLRPTSSA---------DMPNLHPLSSHLQ-GASNEGASDSSNQPSPTVNLSNEYKS 542
           MLPCL   S +           P +  L  H Q G S +G   SS   SP VNL +EY  
Sbjct: 1   MLPCLSLKSPSAATSTCIPDSPPTIVDLHHHSQAGNSTDGTPVSSTLQSPVVNLGHEYSL 60

Query: 541 AVQTTSYGEIWSKFHPDDTSLYEVDSEHFNGHEE-EEQF-LREVLNPNRECVQEALKYAK 368
            VQ+ S+ EI+S  H  + +  E    +F+  +E   QF L  VL+PNR+CV++AL++AK
Sbjct: 61  YVQSNSFNEIYSGTHHQEITNGEQIESNFDADDEGARQFVLARVLHPNRQCVEDALRHAK 120

Query: 367 PNTLTHLISSYFEQSEHTSHFCLLLYHGLQRARSHYAPLHKLIAILPLDSESEFLNQSQC 188
           PNT+T L+S++F+ SE  +  CLLL   + RAR+ Y+P+H L+  LP++ ES  L QS C
Sbjct: 121 PNTVTRLVSNFFDHSESATDLCLLLRRSVFRARAIYSPIHNLLEKLPIELES--LTQSHC 178

Query: 187 DQSFKVFFEFDRLENPFPEPGSNNFYEMHHCFSQLKQKLDSSLGKSRSRIRLVRRATVGC 8
           D + ++  +F+R ++PFP P S+NF  + H FS+L+Q+LD+   +SRSR+  VR A V C
Sbjct: 179 DNAHEMLVQFNRCDSPFPFPDSHNFQGVRHSFSELRQQLDNRRLRSRSRVHFVRPAAVAC 238

Query: 7   AI 2
           A+
Sbjct: 239 AL 240


>ref|NP_188564.2| uncharacterized protein [Arabidopsis thaliana]
           gi|158706504|sp|Q9LT84.2|U496M_ARATH RecName:
           Full=UPF0496 protein At3g19330
           gi|332642703|gb|AEE76224.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 382

 Score =  156 bits (395), Expect = 4e-36
 Identities = 99/232 (42%), Positives = 128/232 (55%), Gaps = 4/232 (1%)
 Frame = -3

Query: 685 PCLRPTSSADMPNLHP-LSSHLQGASNEGASDSSNQPSPTVNLSNEYKSAVQTTSYGEIW 509
           P     S  D P  HP L S +   S   AS SS    PT NLS E   A QT SY ++ 
Sbjct: 9   PASPEASLGDDPLPHPSLESGVASTSRNDASISS----PTFNLSRELAHAFQTPSYHDVR 64

Query: 508 SKFHP--DDTSLYEVDSEHFNGHEEEEQFLREVLNPNRECVQEALKYAKPNTLTHLISSY 335
           S+ H   D T ++     H     + E  L +VL PN+ECVQEA+++ K  TLT+L+S+Y
Sbjct: 65  SRVHVVVDLTQIH-----HRLIQPDIELLLSQVLQPNKECVQEAIRHVKQTTLTNLVSTY 119

Query: 334 FEQSEHTSHFCLLLYHGLQRARSH-YAPLHKLIAILPLDSESEFLNQSQCDQSFKVFFEF 158
           F+ SE  +  CL LY  +  AR H Y PL  L  I P DS    +++S CD +F VF + 
Sbjct: 120 FQHSEDATRLCLNLYQNVHSARHHLYTPLLDLFNIFPGDSLPA-IDESLCDLAFDVFLKL 178

Query: 157 DRLENPFPEPGSNNFYEMHHCFSQLKQKLDSSLGKSRSRIRLVRRATVGCAI 2
           D  ENPF  P S +F +   CFSQLK  LD  L KSRSR+RL+  AT G ++
Sbjct: 179 DTFENPFSSPESYSFRDTQLCFSQLKHNLDRRLRKSRSRVRLIHHATAGSSL 230


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