BLASTX nr result

ID: Bupleurum21_contig00020532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020532
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38318.3| unnamed protein product [Vitis vinifera]               85   7e-15
ref|XP_002270048.1| PREDICTED: F-box protein PP2-B1 [Vitis vinif...    85   7e-15
emb|CBI38323.3| unnamed protein product [Vitis vinifera]               82   5e-14
ref|XP_002270580.1| PREDICTED: F-box protein PP2-B10-like [Vitis...    82   5e-14
ref|XP_002270482.1| PREDICTED: F-box protein PP2-B1 [Vitis vinif...    76   3e-12

>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 55/130 (42%), Positives = 74/130 (56%), Gaps = 6/130 (4%)
 Frame = -1

Query: 374 KDLYLFLTGNPLLIDADTKVFFWLDKWSGKKCFTIITFSVTLY----PEGYQYRSYHESR 207
           K+LY  L   PLLID + K  FWL+K SGKKC+ + +  +T+     P  +++ S  ESR
Sbjct: 88  KELYFTLCDYPLLID-EGKKSFWLEKRSGKKCYMLASRELTIIWGDTPGYWEWTSLPESR 146

Query: 206 FVEV--FESHCEEDWFEIHGKIRTSMLSPDTRYAACLVYNKWEYDREYRAPFEASFGSNE 33
           F EV   ++ C   WFEI GKI T MLSP T YAA LV++          P E+S     
Sbjct: 147 FPEVAYLQAVC---WFEIRGKINTCMLSPRTNYAAYLVFHAGRSHGFEDVPVESSIEIVG 203

Query: 32  DESVKRVVYL 3
           +E+  RV+YL
Sbjct: 204 NETTTRVIYL 213


>ref|XP_002270048.1| PREDICTED: F-box protein PP2-B1 [Vitis vinifera]
          Length = 349

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 55/130 (42%), Positives = 74/130 (56%), Gaps = 6/130 (4%)
 Frame = -1

Query: 374 KDLYLFLTGNPLLIDADTKVFFWLDKWSGKKCFTIITFSVTLY----PEGYQYRSYHESR 207
           K+LY  L   PLLID + K  FWL+K SGKKC+ + +  +T+     P  +++ S  ESR
Sbjct: 88  KELYFTLCDYPLLID-EGKKSFWLEKRSGKKCYMLASRELTIIWGDTPGYWEWTSLPESR 146

Query: 206 FVEV--FESHCEEDWFEIHGKIRTSMLSPDTRYAACLVYNKWEYDREYRAPFEASFGSNE 33
           F EV   ++ C   WFEI GKI T MLSP T YAA LV++          P E+S     
Sbjct: 147 FPEVAYLQAVC---WFEIRGKINTCMLSPRTNYAAYLVFHAGRSHGFEDVPVESSIEIVG 203

Query: 32  DESVKRVVYL 3
           +E+  RV+YL
Sbjct: 204 NETTTRVIYL 213


>emb|CBI38323.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 53/129 (41%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
 Frame = -1

Query: 374 KDLYLFLTGNPLLIDADTKVFFWLDKWSGKKCFTIITFSVTLY----PEGYQYRSYHESR 207
           K+L+  L  +PLLID   K F WLDK SGKKC+ I    +T+     P  + + S  +SR
Sbjct: 122 KELFFRLCNSPLLIDGGKKSF-WLDKESGKKCYMIAARELTIIWSETPRYWTWISPPQSR 180

Query: 206 FVEVFESHCEEDWFEIHGKIRTSMLSPDTRYAACLVYNKWE-YDREYRAPFEASFGSNED 30
           F EV        WF I GK+ T MLSP T YAA L++ + + +D     P E+S G    
Sbjct: 181 FTEVANLKIVW-WFVIKGKMNTCMLSPCTNYAAYLIFQRNDIFDGFEDNPIESSIGVTGG 239

Query: 29  ESVKRVVYL 3
           E+ K+V+YL
Sbjct: 240 ETAKKVIYL 248


>ref|XP_002270580.1| PREDICTED: F-box protein PP2-B10-like [Vitis vinifera]
          Length = 277

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 53/129 (41%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
 Frame = -1

Query: 374 KDLYLFLTGNPLLIDADTKVFFWLDKWSGKKCFTIITFSVTLY----PEGYQYRSYHESR 207
           K+L+  L  +PLLID   K F WLDK SGKKC+ I    +T+     P  + + S  +SR
Sbjct: 88  KELFFRLCNSPLLIDGGKKSF-WLDKESGKKCYMIAARELTIIWSETPRYWTWISPPQSR 146

Query: 206 FVEVFESHCEEDWFEIHGKIRTSMLSPDTRYAACLVYNKWE-YDREYRAPFEASFGSNED 30
           F EV        WF I GK+ T MLSP T YAA L++ + + +D     P E+S G    
Sbjct: 147 FTEVANLKIVW-WFVIKGKMNTCMLSPCTNYAAYLIFQRNDIFDGFEDNPIESSIGVTGG 205

Query: 29  ESVKRVVYL 3
           E+ K+V+YL
Sbjct: 206 ETAKKVIYL 214


>ref|XP_002270482.1| PREDICTED: F-box protein PP2-B1 [Vitis vinifera]
          Length = 337

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
 Frame = -1

Query: 374 KDLYLFLTGNPLLIDADTKVFFWLDKWSGKKCFTIITFSVTLY----PEGYQYRSYHESR 207
           K+L+  L  +PLLID   + F WL+K SGKKC+ +    +++     PE + + S  ESR
Sbjct: 82  KELFFSLCDSPLLIDGGRRGF-WLEKQSGKKCYMLAARELSITWGDTPEYWTWTSIPESR 140

Query: 206 FVEVFESHCEEDWFEIHGKIRTSMLSPDTRYAACLVYNKWEYDREYRAPFEASFGSNEDE 27
           F EV   + E  WFE+ GKI T MLS  T+YAA LV+++ +         ++S G    E
Sbjct: 141 FSEVAFLN-EVCWFEVKGKIDTDMLSLRTKYAAYLVFDRRDSYGFENVEVKSSVGIIGSE 199

Query: 26  SVKRVVYL 3
           + + ++YL
Sbjct: 200 ATENIIYL 207


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