BLASTX nr result

ID: Bupleurum21_contig00020501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020501
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155594.1| PREDICTED: mediator-associated protein 1-lik...    72   1e-10
ref|XP_002313912.1| predicted protein [Populus trichocarpa] gi|2...    69   1e-09
gb|ABK93310.1| unknown [Populus trichocarpa]                           69   1e-09
ref|XP_003635491.1| PREDICTED: uncharacterized protein LOC100854...    67   3e-09
ref|XP_004144578.1| PREDICTED: mediator-associated protein 1-lik...    64   3e-08

>ref|XP_004155594.1| PREDICTED: mediator-associated protein 1-like [Cucumis sativus]
          Length = 414

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 44/114 (38%), Positives = 60/114 (52%), Gaps = 17/114 (14%)
 Frame = +1

Query: 466 VKPIRTKPMEAPSGVKKS--------DPKKAEPKSVGKRLMESVQKAQGSRKKAK--VTK 615
           VKPI +KPM+    VKK          P +   K  G+   ++ +  + S   A   +  
Sbjct: 108 VKPIASKPMDETPKVKKPRSKPSASVTPARPSLKKPGETTRDAKRPKKSSEADADDGIVA 167

Query: 616 GDEEKKSVN-------RLWSEEDEIGILQGMIDYKLEKKEDPHSDFDAFHEFVK 756
            D+ KKSV+       RLWSE+DEI IL GMIDY  +K  DP  D +AFH+F+K
Sbjct: 168 EDDSKKSVDESKKLFQRLWSEDDEIAILNGMIDYSAKKGSDPSLDMNAFHDFIK 221


>ref|XP_002313912.1| predicted protein [Populus trichocarpa] gi|222850320|gb|EEE87867.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 15/116 (12%)
 Frame = +1

Query: 454 PAVPVKPIRTKPMEAP-----SGVKKSDPKKA-----EPKSVGKRL----MESVQKAQGS 591
           P   VKPI +KPME       + VKKS  K A     E  +  KR      +S    +  
Sbjct: 86  PDQSVKPITSKPMEETPPKEAAAVKKSRSKPAVAATPEKSTAVKRGNGADRDSKDLKRAK 145

Query: 592 RKKAKVTKGDEEKKSV-NRLWSEEDEIGILQGMIDYKLEKKEDPHSDFDAFHEFVK 756
            K+++  K ++ KK +  RLW+EEDEI +LQG+ID+  EK  DP  D +AF++F+K
Sbjct: 146 SKESEPEKSEDSKKQLFQRLWTEEDEIALLQGIIDFIAEKGYDPSKDMNAFYDFIK 201


>gb|ABK93310.1| unknown [Populus trichocarpa]
          Length = 387

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 15/116 (12%)
 Frame = +1

Query: 454 PAVPVKPIRTKPMEAP-----SGVKKSDPKKA-----EPKSVGKRL----MESVQKAQGS 591
           P   VKPI +KPME       + VKKS  K A     E  +  KR      +S    +  
Sbjct: 92  PDQSVKPITSKPMEETPPKEAAAVKKSRSKPAVAATPEKSTAVKRGNGADRDSKDLKRAK 151

Query: 592 RKKAKVTKGDEEKKSV-NRLWSEEDEIGILQGMIDYKLEKKEDPHSDFDAFHEFVK 756
            K+++  K ++ KK +  RLW+EEDEI +LQG+ID+  EK  DP  D +AF++F+K
Sbjct: 152 SKESEPEKSEDSKKQLFQRLWTEEDEIALLQGIIDFIAEKGYDPSKDMNAFYDFIK 207


>ref|XP_003635491.1| PREDICTED: uncharacterized protein LOC100854363 isoform 1 [Vitis
           vinifera] gi|359497354|ref|XP_003635492.1| PREDICTED:
           uncharacterized protein LOC100854363 isoform 2 [Vitis
           vinifera] gi|296086994|emb|CBI33256.3| unnamed protein
           product [Vitis vinifera]
          Length = 437

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 28/126 (22%)
 Frame = +1

Query: 466 VKPIRTKPME----------------APSGVKKSDPKKAEPKSVGKRLMESVQKAQGSRK 597
           +KPI TKPME                 PS VK S  K +  K  G+  +E  +  +  +K
Sbjct: 120 IKPIATKPMEETPKSKKARSKPGVSVTPSPVKSSPVKPSNSKRPGEIGLERKESKRAKKK 179

Query: 598 K----------AKVTKGDEEKKSVNRLWSEEDEIGILQGMIDYKLEKKEDPH--SDFDAF 741
           +           K T  D +K+   R+WSEEDE+GIL+GMIDY  +    P+   D + F
Sbjct: 180 EPEAEAEEEEDGKKTGDDSKKQMFQRIWSEEDELGILKGMIDYSAKNGSVPYPNGDMNEF 239

Query: 742 HEFVKD 759
           ++FVK+
Sbjct: 240 YDFVKN 245


>ref|XP_004144578.1| PREDICTED: mediator-associated protein 1-like [Cucumis sativus]
          Length = 324

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 16/117 (13%)
 Frame = +1

Query: 457 AVPVKPIRTKPMEAPSGVKKSDPKK-------AEPKSVG-KRLMESVQKAQGSRKKAK-V 609
           A  +KPI  K     S  KKS  K        A P   G KR +E+  +     K+ K +
Sbjct: 16  AFTIKPILRKLAIDSSKPKKSSHKSSIDCATTANPVCSGSKRPIENHFQGNDPNKRIKRI 75

Query: 610 TKGD--EEKKSV-----NRLWSEEDEIGILQGMIDYKLEKKEDPHSDFDAFHEFVKD 759
             G+  EE K V     NRLWSE+DEI ILQGMID++L K  DP++D + F +F+K+
Sbjct: 76  MNGEDIEEVKKVSGSGINRLWSEDDEISILQGMIDFELAKGSDPYTDMNQFLDFIKE 132


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