BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020460
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
ref|XP_002306200.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002867090.1| pentatricopeptide repeat-containing protein ...    95   7e-18
ref|NP_195239.1| pentatricopeptide repeat-containing protein [Ar...    87   1e-15
ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11

>ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
           gi|297744563|emb|CBI37825.3| unnamed protein product
           [Vitis vinifera]
          Length = 802

 Score =  108 bits (269), Expect = 6e-22
 Identities = 49/87 (56%), Positives = 63/87 (72%)
 Frame = -3

Query: 264 NVDVLNSRKNQSLTKSLVSLVNSGYMEDALDLFEEMCKSDTFVWNVLIRGLTDNGCFQEA 85
           N   L  R + SLT++L S V  GYM++ALDLFE M + DTF+WNV+IRG  DNG F +A
Sbjct: 51  NQSFLVERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDA 110

Query: 84  IDLYYRMCFSGIGADTFTFPFVVKACG 4
           +D Y+RM F G+  D FT+PFV+KACG
Sbjct: 111 VDFYHRMEFGGVRGDNFTYPFVIKACG 137


>ref|XP_002306200.1| predicted protein [Populus trichocarpa] gi|222849164|gb|EEE86711.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/77 (63%), Positives = 60/77 (77%)
 Frame = -3

Query: 231 SLTKSLVSLVNSGYMEDALDLFEEMCKSDTFVWNVLIRGLTDNGCFQEAIDLYYRMCFSG 52
           ++T+ L   V SG M +ALD+FE+M  SDTF+WNV+IRG T+NG FQEAID YYRM   G
Sbjct: 60  NITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEG 119

Query: 51  IGADTFTFPFVVKACGE 1
           I +D FTFPFV+KACGE
Sbjct: 120 IRSDNFTFPFVIKACGE 136


>ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312926|gb|EFH43349.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 803

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/82 (53%), Positives = 60/82 (73%)
 Frame = -3

Query: 255 VLNSRKNQSLTKSLVSLVNSGYMEDALDLFEEMCKSDTFVWNVLIRGLTDNGCFQEAIDL 76
           V     + +LT++L    +SG MEDAL LF+EM K+DTFVWNV+I+G T  G + EA+ L
Sbjct: 54  VTKQLNDPALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQL 113

Query: 75  YYRMCFSGIGADTFTFPFVVKA 10
           Y RM FSG+ AD+FT+PFV+K+
Sbjct: 114 YCRMVFSGVKADSFTYPFVIKS 135


>ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75098809|sp|O49619.1|PP350_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
           gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis
           thaliana] gi|7270464|emb|CAB80230.1| putative protein
           [Arabidopsis thaliana] gi|332661071|gb|AEE86471.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 804

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/74 (52%), Positives = 55/74 (74%)
 Frame = -3

Query: 231 SLTKSLVSLVNSGYMEDALDLFEEMCKSDTFVWNVLIRGLTDNGCFQEAIDLYYRMCFSG 52
           +LT++L    +S  MEDAL LF+EM K+D F+WNV+I+G T  G + EA+  Y RM F+G
Sbjct: 66  ALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAG 125

Query: 51  IGADTFTFPFVVKA 10
           + ADTFT+PFV+K+
Sbjct: 126 VKADTFTYPFVIKS 139


>ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Glycine max]
          Length = 526

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
 Frame = -3

Query: 240 KNQSLTKSLVSLVNS-GYMEDALDLFEEMCKSDT--FVWNVLIRGLTDNGCFQEAIDLYY 70
           KN  ++  L+ L  S GY++DA DLF++M K DT  F WN LI G    G + EAI LY+
Sbjct: 123 KNVGISSKLLRLYASCGYLDDAHDLFDQMAKRDTSAFPWNSLISGYAQVGHYDEAIALYF 182

Query: 69  RMCFSGIGADTFTFPFVVKAC 7
           +M   G+ AD FTFP V+K C
Sbjct: 183 QMVEEGVEADLFTFPRVLKVC 203