BLASTX nr result

ID: Bupleurum21_contig00020439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020439
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274976.2| PREDICTED: uncharacterized protein LOC100263...   102   7e-20
emb|CBI32688.3| unnamed protein product [Vitis vinifera]              102   7e-20
ref|XP_002525182.1| hypothetical protein RCOM_0819620 [Ricinus c...    85   1e-14
ref|XP_002322858.1| predicted protein [Populus trichocarpa] gi|2...    85   1e-14
ref|XP_003625580.1| hypothetical protein MTR_7g100700 [Medicago ...    82   7e-14

>ref|XP_002274976.2| PREDICTED: uncharacterized protein LOC100263620 [Vitis vinifera]
          Length = 363

 Score =  102 bits (254), Expect = 7e-20
 Identities = 79/240 (32%), Positives = 106/240 (44%), Gaps = 20/240 (8%)
 Frame = +3

Query: 3   SCSTVNQRFSVGXXXXXXXXXXXXXXXXXXXVCSDIQSSDDILDGNVNQLIEVSGRDTKI 182
           S STVNQR S                     VC D  +S  +  G  NQ+  +  +  K 
Sbjct: 68  STSTVNQRSS-------NSTASLGTSSPCKGVCEDRNASHTV--GPENQVTGLLSQSGKK 118

Query: 183 ISTQSGTPSQSTLMKPSGLRMPSPKIGFFDGAKSVVHTPNGCRQSQSRLPTGLPKIGAAI 362
            +T +GT       KPSGLRMPSPKIGFFDGAKS+V TPNG  QS S +P+ LPK+GA  
Sbjct: 119 STTGTGTLHHPASTKPSGLRMPSPKIGFFDGAKSMVRTPNGSMQSHSGVPSSLPKVGAGF 178

Query: 363 RSPVGSLKK-------TEEKLLPVKKATAGSNKVLDTSKSAYPKPAQESMRASLKVHGAP 521
            SP G+  K       T   + PV      + K   + K +   P Q+   AS KV  A 
Sbjct: 179 CSPKGASNKGKQGNFQTVRTVTPVGNIKPNTQKNSLSMKPSSSLPHQQPSNASTKVSSAS 238

Query: 522 RNV-------------VSPKASSEVRSSNKATGKPRPENTLTSTDREFEGQNSGSPKPLQ 662
           ++V             +SPKA+ E     +  G    +      D       +GS + ++
Sbjct: 239 KSVRNCAGQSPEIQGNISPKANGESHLKAEEAGLGGVDRAKHDPDSGLISDKNGSREDIK 298


>emb|CBI32688.3| unnamed protein product [Vitis vinifera]
          Length = 316

 Score =  102 bits (254), Expect = 7e-20
 Identities = 79/240 (32%), Positives = 106/240 (44%), Gaps = 20/240 (8%)
 Frame = +3

Query: 3   SCSTVNQRFSVGXXXXXXXXXXXXXXXXXXXVCSDIQSSDDILDGNVNQLIEVSGRDTKI 182
           S STVNQR S                     VC D  +S  +  G  NQ+  +  +  K 
Sbjct: 26  STSTVNQRSS-------NSTASLGTSSPCKGVCEDRNASHTV--GPENQVTGLLSQSGKK 76

Query: 183 ISTQSGTPSQSTLMKPSGLRMPSPKIGFFDGAKSVVHTPNGCRQSQSRLPTGLPKIGAAI 362
            +T +GT       KPSGLRMPSPKIGFFDGAKS+V TPNG  QS S +P+ LPK+GA  
Sbjct: 77  STTGTGTLHHPASTKPSGLRMPSPKIGFFDGAKSMVRTPNGSMQSHSGVPSSLPKVGAGF 136

Query: 363 RSPVGSLKK-------TEEKLLPVKKATAGSNKVLDTSKSAYPKPAQESMRASLKVHGAP 521
            SP G+  K       T   + PV      + K   + K +   P Q+   AS KV  A 
Sbjct: 137 CSPKGASNKGKQGNFQTVRTVTPVGNIKPNTQKNSLSMKPSSSLPHQQPSNASTKVSSAS 196

Query: 522 RNV-------------VSPKASSEVRSSNKATGKPRPENTLTSTDREFEGQNSGSPKPLQ 662
           ++V             +SPKA+ E     +  G    +      D       +GS + ++
Sbjct: 197 KSVRNCAGQSPEIQGNISPKANGESHLKAEEAGLGGVDRAKHDPDSGLISDKNGSREDIK 256


>ref|XP_002525182.1| hypothetical protein RCOM_0819620 [Ricinus communis]
           gi|223535479|gb|EEF37148.1| hypothetical protein
           RCOM_0819620 [Ricinus communis]
          Length = 796

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 64/174 (36%), Positives = 82/174 (47%), Gaps = 10/174 (5%)
 Frame = +3

Query: 135 GNVNQLIEVSGRDTKIISTQSGTPSQSTLMKPSGLRMPSPKIGFFDGAKSVVHTPNGCRQ 314
           G+  Q+  +     K +S  SG       +KPSGLRMPSPKIG+FDGA+S V TPNG  Q
Sbjct: 469 GHGTQVSGLPSECVKQVSRGSGGLVHPDSVKPSGLRMPSPKIGYFDGARSTVRTPNGSSQ 528

Query: 315 SQSRLPTGLPKIGAAIRSPVGSLKKTEE-KLLPVKKATAGSNKVLDTSKSAY------PK 473
               +P+ LP+ GAA  SP G  K  +  KL P +       K+    K A       P 
Sbjct: 529 PHPTVPSDLPRFGAANVSPSGGSKNVKPGKLQPARNVVVQGTKIA-VQKPALECQPKSPL 587

Query: 474 PAQESMRASLKVHGAPRNVVS-PKASSEV--RSSNKATGKPRPENTLTSTDREF 626
           P QES   +     A RN  + P  S +V  R S KA      E+     + EF
Sbjct: 588 PLQESSNTAPNAFSATRNEKNRPCISLKVQNRKSPKAEKVATKESNTAINNPEF 641


>ref|XP_002322858.1| predicted protein [Populus trichocarpa] gi|222867488|gb|EEF04619.1|
           predicted protein [Populus trichocarpa]
          Length = 773

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 67/182 (36%), Positives = 92/182 (50%), Gaps = 20/182 (10%)
 Frame = +3

Query: 153 IEVSGRDTKIISTQSGTPSQSTLMKPSGLRMPSPKIGFFDGAKSVVHTPNGCRQSQSRLP 332
           + +SG   K  +T S +       KPSGLR+PSPKIGFFDG +S V TPN  +QS   LP
Sbjct: 183 VGLSGECVKKATTASSSVLHPDSAKPSGLRLPSPKIGFFDGVRSAVRTPNRNKQSHEALP 242

Query: 333 TGLPKIGA-AIRSPVGSLKKTE-EKLLPVKKATAGSNKVLDT-----SKSAYPKPAQESM 491
           +GLP  GA ++ SP G   + +  KL P + A  G+ +++D       KS  P   QES 
Sbjct: 243 SGLPGFGAGSVVSPSGGSNEAKVGKLQPARTAVRGT-RIMDQVTASGMKSKSPLLLQESS 301

Query: 492 RASLKVHGAPRN-----VVSPKASSEV-----RSSN---KATGKPRPENTLTSTDREFEG 632
            A+ +V  A +N       S KA S +     R SN   K  G      +L ++D  F  
Sbjct: 302 IAAPRVSSAVKNEKRNASTSLKAQSRMSFQGERKSNLKDKKVGLEECNKSLNNSDSGFTE 361

Query: 633 QN 638
           +N
Sbjct: 362 RN 363


>ref|XP_003625580.1| hypothetical protein MTR_7g100700 [Medicago truncatula]
           gi|355500595|gb|AES81798.1| hypothetical protein
           MTR_7g100700 [Medicago truncatula]
          Length = 750

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 58/149 (38%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
 Frame = +3

Query: 102 SDIQSSDDILDGNV---NQLIEVSGRDTKIISTQSGTPSQSTLMKPSGLRMPSPKIGFFD 272
           S I  SD  L+G     N +I  S R   + +     P+     KPSGLR+PSPKIGFFD
Sbjct: 444 SQISRSDFNLEGQEAQQNGIISQSVRTASVAAVNPPAPA-----KPSGLRLPSPKIGFFD 498

Query: 273 GAKSVVHTPNGCRQSQSRLPTGLPKIGAAIRSPVGSLKKTEEKLLPVKKATAGSNKVLDT 452
           GAKS V TP G  Q  + +  GL K GA   S  G +K    KL  V+  T  +NK +D 
Sbjct: 499 GAKSSVRTPRGGAQPHTSVSHGLLKHGAG-SSSEGQIK---AKLQAVRSITPIANKKVDN 554

Query: 453 SKSAYPKPAQESMRASLKVHGAPRNVVSP 539
            ++ +     ES+  ++K   A +NV SP
Sbjct: 555 QQNPHLNHIDESLDVAIKTSSAEQNVKSP 583


Top