BLASTX nr result

ID: Bupleurum21_contig00020407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020407
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum]      82   6e-14
ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE...    74   9e-12
ref|XP_003541436.1| PREDICTED: protein VERNALIZATION INSENSITIVE...    72   4e-11
ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE...    66   3e-09
ref|XP_002329653.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum]
          Length = 739

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 49/117 (41%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
 Frame = -1

Query: 350 VNHEDRQSPEENITEVTSPRNGANTPIQSEAEFPQSAHSSDVGLPNTPCKLENSKDGVAR 171
           +N E++Q  +   TE TS  NG+N P+Q+  EF     S D GLP TPCK+EN K  + R
Sbjct: 550 INLENKQCSDVQTTEETSTDNGSNAPLQTALEFAPFVGSVDAGLPITPCKMENVKGSLGR 609

Query: 170 -SVTAALGKDLDNGSEKEDNQEDDSSVXXXXXXXXXXXXXXXXXKDFGYYVKVIRWL 3
              +    KDLDNGS KED  +   S                  KDF YYVKV+RWL
Sbjct: 610 KGKSEHCSKDLDNGSGKEDGPQVGCS-SKKRVGEWHEECAGTGDKDFEYYVKVVRWL 665


>ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 737

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
 Frame = -1

Query: 341 EDRQSPEENITEVTSPRNGANTPIQSEAEFPQSAHSSDVGLPNTPCKLENSKDGVARSV- 165
           E++ SPEE +TE  S  +G N+P  +  E      SS  GLPNTPCKLE  KDG  ++  
Sbjct: 548 ENKHSPEEQVTEDMSTDDGLNSPALTGRECVPLVGSSKGGLPNTPCKLETLKDGPGKNKR 607

Query: 164 TAALGKDLDNGSEKEDNQEDDSS--VXXXXXXXXXXXXXXXXXKDFGYYVKVIRWL 3
           + + GKD +N S K +  +D S+                    +DF YYVKVIRWL
Sbjct: 608 SKSSGKDQENVSGKREGPQDGSTSKKRSGERQEEGRVANGFSDRDFEYYVKVIRWL 663


>ref|XP_003541436.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 736

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
 Frame = -1

Query: 341 EDRQSPEENITEVTSPRNGANTPIQSEAEFPQSAHSSDVGLPNTPCKLENSKDGVARSV- 165
           E++ SPEE ITE  S  +G  +P  +  E      SS+ GLPNTPCKLE  KDG  ++  
Sbjct: 547 ENKHSPEEQITEDMSTDDGLISPALTGRECVPLVGSSEGGLPNTPCKLETLKDGPGKNKR 606

Query: 164 TAALGKDLDNGSEKEDNQEDDSS--VXXXXXXXXXXXXXXXXXKDFGYYVKVIRWL 3
           + + GKD +N S K +  +D S+                    +DF YYVKVIRWL
Sbjct: 607 SKSSGKDQENVSGKREGPQDGSTSKKRSGERQEEGRVANGFSDRDFEYYVKVIRWL 662


>ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 738

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 46/122 (37%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
 Frame = -1

Query: 359 PSFVNHEDRQSPEENITEVTSPRNGANTPIQSEAEFPQSAHSSDVGLPNTPCKLENSKDG 180
           P  +  +++ S E  I E  S    ANTP+++  E      SS+ GLP TPCKLE  KDG
Sbjct: 543 PKVLKPDNKTSLECQIIEEMSTDKEANTPVRTGMECVPFVGSSEAGLPITPCKLEIFKDG 602

Query: 179 VARSVTAALG-KDLDNGSEKEDNQEDDSS--VXXXXXXXXXXXXXXXXXKDFGYYVKVIR 9
           + R+        DLD+GS K D  +  SS                    +DF YYVKVIR
Sbjct: 603 LGRNGRPKPSTMDLDDGSGKGDEPQAGSSSKKRSAERQDEECAANGPSDRDFEYYVKVIR 662

Query: 8   WL 3
           WL
Sbjct: 663 WL 664


>ref|XP_002329653.1| predicted protein [Populus trichocarpa] gi|222870534|gb|EEF07665.1|
           predicted protein [Populus trichocarpa]
          Length = 679

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
 Frame = -1

Query: 323 EENITEVTSPRNGANTPIQSEAEFPQSAHSSDVGLPNTPCKLENSKDGVARSVT-AALGK 147
           EE+ T+V    NG++ P+Q+  E      +S+  LP TPCKLE  KDG  R+    +  K
Sbjct: 516 EEHATQVLITDNGSDAPVQTAMECMPFVSNSEASLPITPCKLEMHKDGQGRNGRFKSSDK 575

Query: 146 DLDNGSEKEDNQEDDSSVXXXXXXXXXXXXXXXXXKDFGYYVKVIRWL 3
           D+ NG ++E     +S                   +DF YYVK+IRWL
Sbjct: 576 DIVNGRDEECMANGNSD------------------RDFEYYVKIIRWL 605


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