BLASTX nr result
ID: Bupleurum21_contig00020407
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00020407 (383 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum] 82 6e-14 ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 74 9e-12 ref|XP_003541436.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 72 4e-11 ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 66 3e-09 ref|XP_002329653.1| predicted protein [Populus trichocarpa] gi|2... 61 1e-07 >gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum] Length = 739 Score = 81.6 bits (200), Expect = 6e-14 Identities = 49/117 (41%), Positives = 61/117 (52%), Gaps = 1/117 (0%) Frame = -1 Query: 350 VNHEDRQSPEENITEVTSPRNGANTPIQSEAEFPQSAHSSDVGLPNTPCKLENSKDGVAR 171 +N E++Q + TE TS NG+N P+Q+ EF S D GLP TPCK+EN K + R Sbjct: 550 INLENKQCSDVQTTEETSTDNGSNAPLQTALEFAPFVGSVDAGLPITPCKMENVKGSLGR 609 Query: 170 -SVTAALGKDLDNGSEKEDNQEDDSSVXXXXXXXXXXXXXXXXXKDFGYYVKVIRWL 3 + KDLDNGS KED + S KDF YYVKV+RWL Sbjct: 610 KGKSEHCSKDLDNGSGKEDGPQVGCS-SKKRVGEWHEECAGTGDKDFEYYVKVVRWL 665 >ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max] Length = 737 Score = 74.3 bits (181), Expect = 9e-12 Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 3/116 (2%) Frame = -1 Query: 341 EDRQSPEENITEVTSPRNGANTPIQSEAEFPQSAHSSDVGLPNTPCKLENSKDGVARSV- 165 E++ SPEE +TE S +G N+P + E SS GLPNTPCKLE KDG ++ Sbjct: 548 ENKHSPEEQVTEDMSTDDGLNSPALTGRECVPLVGSSKGGLPNTPCKLETLKDGPGKNKR 607 Query: 164 TAALGKDLDNGSEKEDNQEDDSS--VXXXXXXXXXXXXXXXXXKDFGYYVKVIRWL 3 + + GKD +N S K + +D S+ +DF YYVKVIRWL Sbjct: 608 SKSSGKDQENVSGKREGPQDGSTSKKRSGERQEEGRVANGFSDRDFEYYVKVIRWL 663 >ref|XP_003541436.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max] Length = 736 Score = 72.4 bits (176), Expect = 4e-11 Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 3/116 (2%) Frame = -1 Query: 341 EDRQSPEENITEVTSPRNGANTPIQSEAEFPQSAHSSDVGLPNTPCKLENSKDGVARSV- 165 E++ SPEE ITE S +G +P + E SS+ GLPNTPCKLE KDG ++ Sbjct: 547 ENKHSPEEQITEDMSTDDGLISPALTGRECVPLVGSSEGGLPNTPCKLETLKDGPGKNKR 606 Query: 164 TAALGKDLDNGSEKEDNQEDDSS--VXXXXXXXXXXXXXXXXXKDFGYYVKVIRWL 3 + + GKD +N S K + +D S+ +DF YYVKVIRWL Sbjct: 607 SKSSGKDQENVSGKREGPQDGSTSKKRSGERQEEGRVANGFSDRDFEYYVKVIRWL 662 >ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis vinifera] Length = 738 Score = 65.9 bits (159), Expect = 3e-09 Identities = 46/122 (37%), Positives = 59/122 (48%), Gaps = 3/122 (2%) Frame = -1 Query: 359 PSFVNHEDRQSPEENITEVTSPRNGANTPIQSEAEFPQSAHSSDVGLPNTPCKLENSKDG 180 P + +++ S E I E S ANTP+++ E SS+ GLP TPCKLE KDG Sbjct: 543 PKVLKPDNKTSLECQIIEEMSTDKEANTPVRTGMECVPFVGSSEAGLPITPCKLEIFKDG 602 Query: 179 VARSVTAALG-KDLDNGSEKEDNQEDDSS--VXXXXXXXXXXXXXXXXXKDFGYYVKVIR 9 + R+ DLD+GS K D + SS +DF YYVKVIR Sbjct: 603 LGRNGRPKPSTMDLDDGSGKGDEPQAGSSSKKRSAERQDEECAANGPSDRDFEYYVKVIR 662 Query: 8 WL 3 WL Sbjct: 663 WL 664 >ref|XP_002329653.1| predicted protein [Populus trichocarpa] gi|222870534|gb|EEF07665.1| predicted protein [Populus trichocarpa] Length = 679 Score = 60.8 bits (146), Expect = 1e-07 Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 1/108 (0%) Frame = -1 Query: 323 EENITEVTSPRNGANTPIQSEAEFPQSAHSSDVGLPNTPCKLENSKDGVARSVT-AALGK 147 EE+ T+V NG++ P+Q+ E +S+ LP TPCKLE KDG R+ + K Sbjct: 516 EEHATQVLITDNGSDAPVQTAMECMPFVSNSEASLPITPCKLEMHKDGQGRNGRFKSSDK 575 Query: 146 DLDNGSEKEDNQEDDSSVXXXXXXXXXXXXXXXXXKDFGYYVKVIRWL 3 D+ NG ++E +S +DF YYVK+IRWL Sbjct: 576 DIVNGRDEECMANGNSD------------------RDFEYYVKIIRWL 605