BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020352
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23
ref|XP_002888838.1| pentatricopeptide repeat-containing protein ...   109   2e-22
ref|NP_177302.1| pentatricopeptide repeat-containing protein [Ar...   108   3e-22
ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containi...   108   5e-22
ref|XP_002325518.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22

>ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Vitis vinifera]
          Length = 725

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/77 (67%), Positives = 65/77 (84%)
 Frame = +2

Query: 2   GIPVNPTTFSCLIAACVRLRLLSVGRQIHTHIRINGLQYNEFLQTKLVHIYSSGGSIEDA 181
           GIPVNPTTFS L+ ACV  + L+ G+QIH HIRINGL+ NEFL+TKLVH+Y+S GS+EDA
Sbjct: 146 GIPVNPTTFSSLLRACVESKSLTHGKQIHVHIRINGLENNEFLRTKLVHMYTSCGSLEDA 205

Query: 182 RRVFDVLPSRNVYSWNA 232
           R VFD + S++VY+WNA
Sbjct: 206 RGVFDGVSSKSVYTWNA 222


>ref|XP_002888838.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334679|gb|EFH65097.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 688

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/91 (56%), Positives = 69/91 (75%)
 Frame = +2

Query: 2   GIPVNPTTFSCLIAACVRLRLLSVGRQIHTHIRINGLQYNEFLQTKLVHIYSSGGSIEDA 181
           GIPVN TTFS L+AACVR + L  G+Q+H HIRINGL+ NEF++TKLVH+Y++ GS+ DA
Sbjct: 105 GIPVNATTFSALLAACVRRKSLLHGKQVHVHIRINGLESNEFIRTKLVHMYTACGSVRDA 164

Query: 182 RRVFDVLPSRNVYSWNAFTLEIFLTQKVQFR 274
           ++VFD   S NVYSWNA      ++ K +++
Sbjct: 165 QKVFDESTSSNVYSWNALLRGTVISGKKRYQ 195


>ref|NP_177302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169718|sp|Q9C9I3.1|PP115_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g71460, chloroplastic; Flags: Precursor
           gi|12323723|gb|AAG51819.1|AC016163_8 unknown protein;
           45757-47826 [Arabidopsis thaliana]
           gi|332197082|gb|AEE35203.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/91 (56%), Positives = 69/91 (75%)
 Frame = +2

Query: 2   GIPVNPTTFSCLIAACVRLRLLSVGRQIHTHIRINGLQYNEFLQTKLVHIYSSGGSIEDA 181
           GIPVN TTFS L+ ACVR + L  G+Q+H HIRINGL+ NEFL+TKLVH+Y++ GS++DA
Sbjct: 106 GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDA 165

Query: 182 RRVFDVLPSRNVYSWNAFTLEIFLTQKVQFR 274
           ++VFD   S NVYSWNA      ++ K +++
Sbjct: 166 QKVFDESTSSNVYSWNALLRGTVISGKKRYQ 196


>ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Glycine max]
          Length = 682

 Score =  108 bits (270), Expect = 5e-22
 Identities = 49/90 (54%), Positives = 69/90 (76%)
 Frame = +2

Query: 2   GIPVNPTTFSCLIAACVRLRLLSVGRQIHTHIRINGLQYNEFLQTKLVHIYSSGGSIEDA 181
           GIPV+ TTFS ++AAC+R + L  GR++HTHIRINGL+ N FL+TKLVH+Y++ GS+EDA
Sbjct: 108 GIPVDATTFSSVVAACIRAKSLPQGREVHTHIRINGLENNSFLRTKLVHMYTACGSLEDA 167

Query: 182 RRVFDVLPSRNVYSWNAFTLEIFLTQKVQF 271
           +++FD LP  +VY WNA      ++ K Q+
Sbjct: 168 QKLFDGLPCESVYPWNALLRGTVVSGKRQY 197


>ref|XP_002325518.1| predicted protein [Populus trichocarpa] gi|222862393|gb|EEE99899.1|
           predicted protein [Populus trichocarpa]
          Length = 678

 Score =  108 bits (270), Expect = 5e-22
 Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   GIPVNPTTFSCLIAACVRLRLLSVGRQIHTHIRINGLQYNEFLQTKLVHIYSSGGSIEDA 181
           GIPVNPTTFS LIAAC+R + L+  ++IHTH+RINGLQ NEFL+TKLVH+Y+S GSIEDA
Sbjct: 98  GIPVNPTTFSALIAACIRSKSLTKAKEIHTHLRINGLQNNEFLRTKLVHMYTSCGSIEDA 157

Query: 182 RRVFDVLPS-RNVYSWNAFTLEIFLTQKVQF 271
           + VFD   S   VY WNA      ++ K ++
Sbjct: 158 KSVFDECTSTATVYPWNALIRGTVISGKKRY 188