BLASTX nr result

ID: Bupleurum21_contig00020337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020337
         (909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|2...   310   3e-82
emb|CBI20464.3| unnamed protein product [Vitis vinifera]              306   6e-81
ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-l...   306   6e-81
emb|CAN83694.1| hypothetical protein VITISV_013363 [Vitis vinifera]   306   6e-81
ref|XP_002866048.1| WD-40 repeat family protein [Arabidopsis lyr...   280   4e-73

>ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|222857635|gb|EEE95182.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  310 bits (794), Expect = 3e-82
 Identities = 144/193 (74%), Positives = 164/193 (84%)
 Frame = +1

Query: 1   GGSKGVLTLWDIRTKEAVHRYVRNLGPILDVEFTNGGSQFISSSDVSKDSVTENSIMVWD 180
           GGSKG L LWDIR    V  Y+R LGPILDVEFT  G QFISSSDVS  +++ENSI+VWD
Sbjct: 216 GGSKGCLRLWDIRNGNVVREYIRGLGPILDVEFTINGKQFISSSDVSGSNLSENSIIVWD 275

Query: 181 VSRQVPSSNQVYAEAYTCPSVKCHPSEQNFVAQSNGNYIAIFSAKGPFKLDKYRRYESHG 360
           VSRQVP SNQVY EAYTCPSV+CHP E  FVAQSN NYIAIFS+  PF+LDKY+RYESHG
Sbjct: 276 VSRQVPLSNQVYVEAYTCPSVRCHPFEPCFVAQSNANYIAIFSSSPPFRLDKYKRYESHG 335

Query: 361 VSGFPVQCDFSLDGEKIASGSSDGCIYFYNSRSTQLIKKVKMYEHACIDVAFHPVMPNVI 540
           VSGFPV+C+FSLDGEK+ SGSSDGCIY YN RS++LI+K+K+YE ACIDV FHPV+PNVI
Sbjct: 336 VSGFPVKCNFSLDGEKLVSGSSDGCIYIYNYRSSELIRKIKVYEQACIDVVFHPVLPNVI 395

Query: 541 ASCSWNGNVSVLE 579
            SCSWNG+VS+ E
Sbjct: 396 GSCSWNGDVSIFE 408


>emb|CBI20464.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  306 bits (783), Expect = 6e-81
 Identities = 139/193 (72%), Positives = 167/193 (86%)
 Frame = +1

Query: 1   GGSKGVLTLWDIRTKEAVHRYVRNLGPILDVEFTNGGSQFISSSDVSKDSVTENSIMVWD 180
           GGSKG L LWDIRT + VH Y+R LGPILD+EFT    QFISSSDVS  +++ENSI+VWD
Sbjct: 314 GGSKGRLRLWDIRTGKVVHEYIRGLGPILDIEFTVNAKQFISSSDVSGSNMSENSIVVWD 373

Query: 181 VSRQVPSSNQVYAEAYTCPSVKCHPSEQNFVAQSNGNYIAIFSAKGPFKLDKYRRYESHG 360
           VSRQVP SNQVY EAYTCP ++CHPS+  F+AQSNGNYIAIFS+  PFKLDKY+RYE+HG
Sbjct: 374 VSRQVPLSNQVYVEAYTCPCIRCHPSDPFFIAQSNGNYIAIFSSCPPFKLDKYKRYENHG 433

Query: 361 VSGFPVQCDFSLDGEKIASGSSDGCIYFYNSRSTQLIKKVKMYEHACIDVAFHPVMPNVI 540
           VSGFP++C+FSLDGEK+ASGSSDGCIY Y+ RS++L++K+K YE ACIDVAFHP++PNVI
Sbjct: 434 VSGFPIKCNFSLDGEKLASGSSDGCIYLYDYRSSELVQKIKAYEQACIDVAFHPLLPNVI 493

Query: 541 ASCSWNGNVSVLE 579
           A+C W+G VSV E
Sbjct: 494 AACGWDGAVSVFE 506


>ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-like [Vitis vinifera]
          Length = 418

 Score =  306 bits (783), Expect = 6e-81
 Identities = 139/193 (72%), Positives = 167/193 (86%)
 Frame = +1

Query: 1   GGSKGVLTLWDIRTKEAVHRYVRNLGPILDVEFTNGGSQFISSSDVSKDSVTENSIMVWD 180
           GGSKG L LWDIRT + VH Y+R LGPILD+EFT    QFISSSDVS  +++ENSI+VWD
Sbjct: 226 GGSKGRLRLWDIRTGKVVHEYIRGLGPILDIEFTVNAKQFISSSDVSGSNMSENSIVVWD 285

Query: 181 VSRQVPSSNQVYAEAYTCPSVKCHPSEQNFVAQSNGNYIAIFSAKGPFKLDKYRRYESHG 360
           VSRQVP SNQVY EAYTCP ++CHPS+  F+AQSNGNYIAIFS+  PFKLDKY+RYE+HG
Sbjct: 286 VSRQVPLSNQVYVEAYTCPCIRCHPSDPFFIAQSNGNYIAIFSSCPPFKLDKYKRYENHG 345

Query: 361 VSGFPVQCDFSLDGEKIASGSSDGCIYFYNSRSTQLIKKVKMYEHACIDVAFHPVMPNVI 540
           VSGFP++C+FSLDGEK+ASGSSDGCIY Y+ RS++L++K+K YE ACIDVAFHP++PNVI
Sbjct: 346 VSGFPIKCNFSLDGEKLASGSSDGCIYLYDYRSSELVQKIKAYEQACIDVAFHPLLPNVI 405

Query: 541 ASCSWNGNVSVLE 579
           A+C W+G VSV E
Sbjct: 406 AACGWDGAVSVFE 418


>emb|CAN83694.1| hypothetical protein VITISV_013363 [Vitis vinifera]
          Length = 297

 Score =  306 bits (783), Expect = 6e-81
 Identities = 139/193 (72%), Positives = 167/193 (86%)
 Frame = +1

Query: 1   GGSKGVLTLWDIRTKEAVHRYVRNLGPILDVEFTNGGSQFISSSDVSKDSVTENSIMVWD 180
           GGSKG L LWDIRT + VH Y+R LGPILD+EFT    QFISSSDVS  +++ENSI+VWD
Sbjct: 105 GGSKGRLRLWDIRTGKVVHEYIRGLGPILDIEFTVNAKQFISSSDVSGSNMSENSIVVWD 164

Query: 181 VSRQVPSSNQVYAEAYTCPSVKCHPSEQNFVAQSNGNYIAIFSAKGPFKLDKYRRYESHG 360
           VSRQVP SNQVY EAYTCP ++CHPS+  F+AQSNGNYIAIFS+  PFKLDKY+RYE+HG
Sbjct: 165 VSRQVPLSNQVYVEAYTCPCIRCHPSDPFFIAQSNGNYIAIFSSCPPFKLDKYKRYENHG 224

Query: 361 VSGFPVQCDFSLDGEKIASGSSDGCIYFYNSRSTQLIKKVKMYEHACIDVAFHPVMPNVI 540
           VSGFP++C+FSLDGEK+ASGSSDGCIY Y+ RS++L++K+K YE ACIDVAFHP++PNVI
Sbjct: 225 VSGFPIKCNFSLDGEKLASGSSDGCIYLYDYRSSELVQKIKAYEQACIDVAFHPLLPNVI 284

Query: 541 ASCSWNGNVSVLE 579
           A+C W+G VSV E
Sbjct: 285 AACGWDGAVSVFE 297


>ref|XP_002866048.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311883|gb|EFH42307.1| WD-40 repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score =  280 bits (715), Expect = 4e-73
 Identities = 124/193 (64%), Positives = 158/193 (81%)
 Frame = +1

Query: 1   GGSKGVLTLWDIRTKEAVHRYVRNLGPILDVEFTNGGSQFISSSDVSKDSVTENSIMVWD 180
           GGSKG L LWDIR  + VH Y+R+LGPILDVEF  GG +FISSSDVS  +++EN++M+WD
Sbjct: 263 GGSKGSLRLWDIRANKIVHEYIRDLGPILDVEFIAGGKRFISSSDVSGRNISENAVMIWD 322

Query: 181 VSRQVPSSNQVYAEAYTCPSVKCHPSEQNFVAQSNGNYIAIFSAKGPFKLDKYRRYESHG 360
           +SR+VP SNQVY EAYTCP +K HP +  F+AQS+GNY AIFS   PFKL+KY+R+E H 
Sbjct: 323 ISREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYAAIFSTNPPFKLNKYKRFEGHW 382

Query: 361 VSGFPVQCDFSLDGEKIASGSSDGCIYFYNSRSTQLIKKVKMYEHACIDVAFHPVMPNVI 540
           V+GFP++C+FS DGE + SGSSDG IY Y+ +ST+LIKK+K YE  C+DV++HPV+PNV+
Sbjct: 383 VAGFPIKCNFSPDGETLISGSSDGSIYMYSYKSTELIKKLKAYEQPCVDVSYHPVLPNVV 442

Query: 541 ASCSWNGNVSVLE 579
           A+CSWNG VSV E
Sbjct: 443 AACSWNGQVSVFE 455


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