BLASTX nr result

ID: Bupleurum21_contig00020288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020288
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271596.1| PREDICTED: 28S ribosomal protein S29, mitoch...   100   9e-20
ref|XP_004173487.1| PREDICTED: uncharacterized LOC101220451, par...    89   4e-16
ref|XP_004150091.1| PREDICTED: uncharacterized protein LOC101212...    89   4e-16
ref|XP_004145300.1| PREDICTED: uncharacterized protein LOC101220...    89   4e-16
ref|XP_003538324.1| PREDICTED: 28S ribosomal protein S29, mitoch...    85   5e-15

>ref|XP_002271596.1| PREDICTED: 28S ribosomal protein S29, mitochondrial [Vitis
           vinifera] gi|297745805|emb|CBI15861.3| unnamed protein
           product [Vitis vinifera]
          Length = 457

 Score =  100 bits (250), Expect = 9e-20
 Identities = 60/120 (50%), Positives = 78/120 (65%)
 Frame = +3

Query: 27  SRTFATKKTKQSAKLIKNEAKSKHKPKNKPEEFXXXXXXXXXXXXNLANNDTRVRQLDLD 206
           S  +++K TK S  L+K + K+K KP  K EE             +L + + R R+L  D
Sbjct: 32  SSNYSSKNTKSS--LVKAK-KAKSKPDAKSEE--ASAAAADDGLSDLLDEEARDRRLAED 86

Query: 207 EKDKSLDVGVDSRPLFTSAASISELTSTDTCSYMKFSMEELNAVLPEGLPTGMLKEFEDS 386
           +KD SLDVG + R LFTSA +IS+L+  DTC+YMKFS E LNAVLPEGL  GM+KEFE+S
Sbjct: 87  DKDPSLDVGPNGRALFTSATTISQLSRKDTCTYMKFSTEGLNAVLPEGLTAGMVKEFEES 146


>ref|XP_004173487.1| PREDICTED: uncharacterized LOC101220451, partial [Cucumis sativus]
          Length = 246

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 5/114 (4%)
 Frame = +3

Query: 60  SAKLIKNEAKSKHKPKNKPEEFXXXXXXXXXXXXN-----LANNDTRVRQLDLDEKDKSL 224
           SAK  K+  K   K K++ +              N     L+++  R R+L  +E D SL
Sbjct: 32  SAKTTKSPVKKGKKGKSEADAKAGDDPSAPAAASNDLDAALSDDKIRARRLAAEENDTSL 91

Query: 225 DVGVDSRPLFTSAASISELTSTDTCSYMKFSMEELNAVLPEGLPTGMLKEFEDS 386
           DVG + RPLFTSA+S+S+LT  D  +Y K +ME LN VLPEGLP GM+KEFE+S
Sbjct: 92  DVGPNGRPLFTSASSLSQLTRKDAGTYFKLNMEGLNEVLPEGLPMGMVKEFEES 145


>ref|XP_004150091.1| PREDICTED: uncharacterized protein LOC101212097 [Cucumis sativus]
          Length = 445

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/74 (58%), Positives = 57/74 (77%)
 Frame = +3

Query: 165 LANNDTRVRQLDLDEKDKSLDVGVDSRPLFTSAASISELTSTDTCSYMKFSMEELNAVLP 344
           L+++  R R+L  +E D SLDVG + RPLFTSA+S+S+LT  D  +Y K++ME LN VLP
Sbjct: 73  LSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYFKYNMEGLNEVLP 132

Query: 345 EGLPTGMLKEFEDS 386
           EGLP GM+KEFE+S
Sbjct: 133 EGLPMGMVKEFEES 146


>ref|XP_004145300.1| PREDICTED: uncharacterized protein LOC101220451 [Cucumis sativus]
          Length = 454

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 5/114 (4%)
 Frame = +3

Query: 60  SAKLIKNEAKSKHKPKNKPEEFXXXXXXXXXXXXN-----LANNDTRVRQLDLDEKDKSL 224
           SAK  K+  K   K K++ +              N     L+++  R R+L  +E D SL
Sbjct: 32  SAKTTKSPVKKGKKGKSEADAKAGDDPSAPAAASNDLDAALSDDKIRARRLAAEENDTSL 91

Query: 225 DVGVDSRPLFTSAASISELTSTDTCSYMKFSMEELNAVLPEGLPTGMLKEFEDS 386
           DVG + RPLFTSA+S+S+LT  D  +Y K +ME LN VLPEGLP GM+KEFE+S
Sbjct: 92  DVGPNGRPLFTSASSLSQLTRKDAGTYFKLNMEGLNEVLPEGLPMGMVKEFEES 145


>ref|XP_003538324.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Glycine
           max]
          Length = 436

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/74 (54%), Positives = 52/74 (70%)
 Frame = +3

Query: 165 LANNDTRVRQLDLDEKDKSLDVGVDSRPLFTSAASISELTSTDTCSYMKFSMEELNAVLP 344
           L +   R RQLD D+K+ SLDVG + RPLF++A S S L+  D C+Y K + + LN VLP
Sbjct: 52  LIDEQERRRQLDADDKNPSLDVGPNGRPLFSAAPSFSHLSRNDVCTYFKLTKDALNKVLP 111

Query: 345 EGLPTGMLKEFEDS 386
           EGLP GM+ EF+DS
Sbjct: 112 EGLPVGMVNEFQDS 125


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