BLASTX nr result

ID: Bupleurum21_contig00020280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020280
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002886939.1| hypothetical protein ARALYDRAFT_475645 [Arab...   118   6e-25
ref|XP_002303489.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002326610.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
gb|AFJ66205.1| hypothetical protein 34G24.3 [Capsella rubella]        111   6e-23
ref|XP_002865852.1| hypothetical protein ARALYDRAFT_495202 [Arab...   111   6e-23

>ref|XP_002886939.1| hypothetical protein ARALYDRAFT_475645 [Arabidopsis lyrata subsp.
           lyrata] gi|297332780|gb|EFH63198.1| hypothetical protein
           ARALYDRAFT_475645 [Arabidopsis lyrata subsp. lyrata]
          Length = 782

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/101 (57%), Positives = 74/101 (73%), Gaps = 6/101 (5%)
 Frame = +1

Query: 244 VSENGKDVNS--DDTXXXXXXXXXWDPQPADGNGET----KKRKSRWADDEPKPVFQLPD 405
           +SEN KD +   ++T         WDP P++G  ++    +KRKSRWADDEPKP  QLPD
Sbjct: 69  LSENDKDQSGGEEETTSRRKRRSRWDPPPSEGGTDSEPGIRKRKSRWADDEPKPQIQLPD 128

Query: 406 FMKDYAQGMDMDPEIQALNARLLEISRILQAGVQLDDRPEG 528
           FMKD+  G++ DPEIQALN+RLLEISR+LQ+G+ LDDRPEG
Sbjct: 129 FMKDFTGGIEFDPEIQALNSRLLEISRMLQSGMPLDDRPEG 169


>ref|XP_002303489.1| predicted protein [Populus trichocarpa] gi|222840921|gb|EEE78468.1|
           predicted protein [Populus trichocarpa]
          Length = 794

 Score =  116 bits (291), Expect = 2e-24
 Identities = 64/123 (52%), Positives = 78/123 (63%), Gaps = 12/123 (9%)
 Frame = +1

Query: 196 PELQPTQDLKPNQVQQVSENGKDVNS--DDTXXXXXXXXXWDPQPADGNGE--------- 342
           PE+ P   L  N V   +   +D +   ++T         WDP PAD   +         
Sbjct: 87  PEI-PKSLLSENGVANTNSGDRDCSGGEEETTSRRRRRSRWDP-PADAGADGSNNNDSGS 144

Query: 343 -TKKRKSRWADDEPKPVFQLPDFMKDYAQGMDMDPEIQALNARLLEISRILQAGVQLDDR 519
            T+KRKSRWADDEPKPV QLPDFMKD+  G++ DPEIQALNARLLEISR+LQ+G+ LDDR
Sbjct: 145 GTRKRKSRWADDEPKPVIQLPDFMKDFTGGIEFDPEIQALNARLLEISRMLQSGLPLDDR 204

Query: 520 PEG 528
           PEG
Sbjct: 205 PEG 207


>ref|XP_002326610.1| predicted protein [Populus trichocarpa] gi|222833932|gb|EEE72409.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score =  112 bits (281), Expect = 3e-23
 Identities = 66/131 (50%), Positives = 79/131 (60%), Gaps = 20/131 (15%)
 Frame = +1

Query: 196 PELQPTQDLKPNQVQQVSENGKDVNS--DDTXXXXXXXXXWDPQPAD------GNGE--- 342
           PE+ P   L  N V   +   +D +   ++T         WDP PAD      G G    
Sbjct: 2   PEI-PKPLLSENGVANTNSGDRDYSGGEEETTSRRRRRSRWDP-PADSGTDGGGGGSSSN 59

Query: 343 ---------TKKRKSRWADDEPKPVFQLPDFMKDYAQGMDMDPEIQALNARLLEISRILQ 495
                    T+KRKSRWADDEPKPV QLPDFMKD+  G++ DPEIQALNARLLEISR+LQ
Sbjct: 60  TNNNDSGSGTRKRKSRWADDEPKPVIQLPDFMKDFTGGIEFDPEIQALNARLLEISRMLQ 119

Query: 496 AGVQLDDRPEG 528
           +G+ LDDRPEG
Sbjct: 120 SGLPLDDRPEG 130


>gb|AFJ66205.1| hypothetical protein 34G24.3 [Capsella rubella]
          Length = 806

 Score =  111 bits (278), Expect = 6e-23
 Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 14/109 (12%)
 Frame = +1

Query: 244 VSENGKDVNS--DDTXXXXXXXXXWDPQPAD---------GNGE---TKKRKSRWADDEP 381
           +S N KD +   ++T         WDP P++         GN     T+KRKSRWADDEP
Sbjct: 75  LSGNDKDQSGGEEETTSRRKRRSRWDPPPSESINNPSAEGGNDSGTGTRKRKSRWADDEP 134

Query: 382 KPVFQLPDFMKDYAQGMDMDPEIQALNARLLEISRILQAGVQLDDRPEG 528
           KP  QLPDFMKD+  G++ DPEIQALN+RLLEISR+LQ+G+ LDDRPEG
Sbjct: 135 KPQIQLPDFMKDFTGGIEFDPEIQALNSRLLEISRMLQSGMPLDDRPEG 183


>ref|XP_002865852.1| hypothetical protein ARALYDRAFT_495202 [Arabidopsis lyrata subsp.
           lyrata] gi|297311687|gb|EFH42111.1| hypothetical protein
           ARALYDRAFT_495202 [Arabidopsis lyrata subsp. lyrata]
          Length = 798

 Score =  111 bits (278), Expect = 6e-23
 Identities = 63/127 (49%), Positives = 79/127 (62%), Gaps = 15/127 (11%)
 Frame = +1

Query: 193 PPELQPTQDLKPNQVQQ-VSENGKDVNS--DDTXXXXXXXXXWDPQPADGNGE------- 342
           P  L+P   L  N V + +S N KD +   ++T         WDP P++           
Sbjct: 55  PEFLRPL--LSENGVSKTLSGNDKDQSGGEEETTSRRKRRSRWDPPPSESGNNPSAEGST 112

Query: 343 -----TKKRKSRWADDEPKPVFQLPDFMKDYAQGMDMDPEIQALNARLLEISRILQAGVQ 507
                T+KRKSRWADDEPKP  QLPDFMKD+  G++ DPEIQALN+RLLEISR+LQ+G+ 
Sbjct: 113 DSGTGTRKRKSRWADDEPKPHIQLPDFMKDFTGGIEFDPEIQALNSRLLEISRMLQSGMP 172

Query: 508 LDDRPEG 528
           LDDRPEG
Sbjct: 173 LDDRPEG 179


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