BLASTX nr result

ID: Bupleurum21_contig00020236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020236
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275413.2| PREDICTED: uncharacterized protein LOC100254...   110   9e-23
emb|CAN64856.1| hypothetical protein VITISV_030491 [Vitis vinifera]   110   9e-23
ref|XP_002310621.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002530262.1| conserved hypothetical protein [Ricinus comm...    99   5e-19
ref|XP_002302161.1| predicted protein [Populus trichocarpa] gi|1...    93   2e-17

>ref|XP_002275413.2| PREDICTED: uncharacterized protein LOC100254360 [Vitis vinifera]
          Length = 678

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/93 (63%), Positives = 70/93 (75%), Gaps = 8/93 (8%)
 Frame = -2

Query: 299 IIIMEKSKSCPDYAGSYVEARFGFEDRDKSFSFNGHGPAG--------DNPEVKRRKRVA 144
           ++IMEKS+S PD+  SY +AR GFE R  S+SFNG  P G        DNPE+KRRKRVA
Sbjct: 587 LLIMEKSRSFPDHPYSYSDARHGFELRSNSYSFNG--PIGKVDEFATSDNPEMKRRKRVA 644

Query: 143 NYNMYTVEGKLKSSFINSFKWIKNKFSADGYYD 45
           +YNMY++EGKLKSS  NSFKWIKNKF+ D YYD
Sbjct: 645 SYNMYSMEGKLKSSLRNSFKWIKNKFT-DDYYD 676


>emb|CAN64856.1| hypothetical protein VITISV_030491 [Vitis vinifera]
          Length = 210

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/93 (63%), Positives = 70/93 (75%), Gaps = 8/93 (8%)
 Frame = -2

Query: 299 IIIMEKSKSCPDYAGSYVEARFGFEDRDKSFSFNGHGPAG--------DNPEVKRRKRVA 144
           ++IMEKS+S PD+  SY +AR GFE R  S+SFNG  P G        DNPE+KRRKRVA
Sbjct: 119 LLIMEKSRSFPDHPYSYSDARHGFELRSNSYSFNG--PIGKVDEFATSDNPEMKRRKRVA 176

Query: 143 NYNMYTVEGKLKSSFINSFKWIKNKFSADGYYD 45
           +YNMY++EGKLKSS  NSFKWIKNKF+ D YYD
Sbjct: 177 SYNMYSMEGKLKSSLRNSFKWIKNKFT-DDYYD 208


>ref|XP_002310621.1| predicted protein [Populus trichocarpa] gi|222853524|gb|EEE91071.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 54/92 (58%), Positives = 63/92 (68%), Gaps = 10/92 (10%)
 Frame = -2

Query: 290 MEKSKSCPDYAGSYVEARFGFEDRDKSFSFNGHGPAGD----------NPEVKRRKRVAN 141
           MEKSKS   Y+ +Y E R GFE+R  S+SFNG  PAG           NPE+KRRKRVA 
Sbjct: 1   MEKSKSFSGYSNAYSEIRLGFEERSGSYSFNG--PAGKVDDVELESSGNPELKRRKRVAQ 58

Query: 140 YNMYTVEGKLKSSFINSFKWIKNKFSADGYYD 45
           YNMYT+EGK+KSS  NSFKWIK+K   D Y+D
Sbjct: 59  YNMYTMEGKIKSSLRNSFKWIKSKL-VDDYFD 89


>ref|XP_002530262.1| conserved hypothetical protein [Ricinus communis]
           gi|223530228|gb|EEF32132.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 88

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 52/85 (61%), Positives = 58/85 (68%), Gaps = 7/85 (8%)
 Frame = -2

Query: 290 MEKSKSCPDYAGSYVEARFGFEDRDKSFSFNGHGP-------AGDNPEVKRRKRVANYNM 132
           MEKSKS   Y+  Y E R  FEDR KS+SFNG          +  NPEVKRR+RVA YNM
Sbjct: 1   MEKSKSFSGYSNPYSEIRLEFEDRSKSYSFNGPTTGKMDELASSGNPEVKRRRRVAQYNM 60

Query: 131 YTVEGKLKSSFINSFKWIKNKFSAD 57
           YT+EGKLKSS  NSFKWIK+KF  D
Sbjct: 61  YTMEGKLKSSLRNSFKWIKSKFVDD 85


>ref|XP_002302161.1| predicted protein [Populus trichocarpa] gi|118482032|gb|ABK92947.1|
           unknown [Populus trichocarpa]
           gi|222843887|gb|EEE81434.1| predicted protein [Populus
           trichocarpa]
          Length = 87

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/86 (55%), Positives = 62/86 (72%), Gaps = 6/86 (6%)
 Frame = -2

Query: 290 MEKSKSCPDYAGSYVEARFGFEDRDKSFSFNGHGPAGD------NPEVKRRKRVANYNMY 129
           MEKSKS P Y+ S+    FGFED+  S++FNG    G+      +PE+KR+KR+A+YN++
Sbjct: 1   MEKSKSFPQYS-SFFSGEFGFEDQSNSYNFNGPCQKGNGFATSSDPELKRKKRIASYNVF 59

Query: 128 TVEGKLKSSFINSFKWIKNKFSADGY 51
           TVEGKLKSS  NSFKWIK+KFS   Y
Sbjct: 60  TVEGKLKSSARNSFKWIKSKFSDARY 85


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